Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB1Q8WWH5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB1Q8WWH5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
TRUB1Q8WWH5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRUB1Q8WWH5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 EDA-201ENST00000338901 1233 ntBASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB1Q8WWH5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 FZD10-202ENST00000539839 3282 ntBASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 AP001330.3-201ENST00000520123 633 ntBASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB1Q8WWH5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 AC007322.3-201ENST00000426526 701 ntBASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms