Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC25.08■■□□□ 1.61
COL23A1Q86Y22 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
COL23A1Q86Y22 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 AL359075.1-203ENST00000462729 1002 ntBASIC25.07■■□□□ 1.6
COL23A1Q86Y22 KRT18P16-201ENST00000510337 1294 ntBASIC25.07■■□□□ 1.6
COL23A1Q86Y22 AC012313.10-201ENST00000623509 926 ntBASIC25.07■■□□□ 1.6
COL23A1Q86Y22 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL23A1Q86Y22 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 ANKRD20A18P-201ENST00000359341 492 ntBASIC25.06■■□□□ 1.6
COL23A1Q86Y22 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 HOMER2P1-201ENST00000455653 964 ntBASIC25.06■■□□□ 1.6
COL23A1Q86Y22 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL23A1Q86Y22 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 KRT8P17-201ENST00000453110 1448 ntBASIC25.05■■□□□ 1.6
COL23A1Q86Y22 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 PTK2-216ENST00000519881 863 ntTSL 3 BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 AL441883.1-201ENST00000566170 1045 ntBASIC25.05■■□□□ 1.6
COL23A1Q86Y22 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL23A1Q86Y22 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 AC004951.3-201ENST00000418645 1148 ntBASIC25.04■■□□□ 1.6
COL23A1Q86Y22 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 AL023803.3-201ENST00000615559 522 ntBASIC25.04■■□□□ 1.6
COL23A1Q86Y22 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL23A1Q86Y22 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 YBX1P10-201ENST00000444752 975 ntBASIC25.03■■□□□ 1.6
COL23A1Q86Y22 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 AC069148.1-201ENST00000608741 768 ntBASIC25.03■■□□□ 1.6
COL23A1Q86Y22 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL23A1Q86Y22 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL23A1Q86Y22 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL23A1Q86Y22 TFP1-202ENST00000475455 1573 ntBASIC25.02■■□□□ 1.6
COL23A1Q86Y22 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL23A1Q86Y22 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL23A1Q86Y22 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.02■■□□□ 1.6
COL23A1Q86Y22 TUBB8P6-201ENST00000436895 1288 ntBASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms