Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 CYCS-204ENST00000413447 498 ntTSL 38.54□□□□□ -1.049e-7■■■□□ 17.7
SUB1P53999 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC8.5□□□□□ -1.059e-7■■■□□ 17.7
SUB1P53999 SMPD4-206ENST00000433118 3335 ntTSL 58.49□□□□□ -1.059e-7■■■□□ 17.7
SUB1P53999 CD151-209ENST00000526439 713 ntTSL 28.43□□□□□ -1.069e-7■■■□□ 17.7
SUB1P53999 ICE2-213ENST00000561114 3796 ntTSL 1 (best) BASIC8.32□□□□□ -1.089e-7■■■□□ 17.7
SUB1P53999 UPF3B-201ENST00000276201 2378 ntTSL 1 (best) BASIC8.25□□□□□ -1.099e-7■■■□□ 17.7
SUB1P53999 STX12-201ENST00000373943 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.139e-7■■■□□ 17.7
SUB1P53999 CFDP1-203ENST00000564286 775 ntTSL 57.72□□□□□ -1.179e-7■■■□□ 17.7
SUB1P53999 SCML2-201ENST00000251900 4200 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.189e-7■■■□□ 17.7
SUB1P53999 SMPD4-203ENST00000412570 3601 ntTSL 27.67□□□□□ -1.189e-7■■■□□ 17.7
SUB1P53999 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.219e-7■■■□□ 17.7
SUB1P53999 LDLR-210ENST00000559340 605 ntTSL 57.27□□□□□ -1.259e-7■■■□□ 17.7
SUB1P53999 TFRC-209ENST00000464368 569 ntTSL 46.99□□□□□ -1.299e-7■■■□□ 17.7
SUB1P53999 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.325e-7■■■□□ 17.7
SUB1P53999 ASCC1-207ENST00000486689 1798 ntTSL 56.8□□□□□ -1.329e-7■■■□□ 17.7
SUB1P53999 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.349e-7■■■□□ 17.7
SUB1P53999 ICE2-203ENST00000558181 7060 ntTSL 1 (best)6.55□□□□□ -1.369e-7■■■□□ 17.7
SUB1P53999 CFDP1-206ENST00000566254 342 ntTSL 36.38□□□□□ -1.399e-7■■■□□ 17.7
SUB1P53999 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.429e-7■■■□□ 17.7
SUB1P53999 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC5.79□□□□□ -1.489e-7■■■□□ 17.7
SUB1P53999 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.539e-7■■■□□ 17.7
SUB1P53999 UPF3B-205ENST00000636792 834 ntTSL 55.28□□□□□ -1.569e-7■■■□□ 17.7
SUB1P53999 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.25□□□□□ -1.579e-7■■■□□ 17.7
SUB1P53999 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.97□□□□□ -1.619e-7■■■□□ 17.7
SUB1P53999 ICE2-207ENST00000560072 559 ntTSL 44.72□□□□□ -1.659e-7■■■□□ 17.7
SUB1P53999 ICE2-210ENST00000560668 555 ntTSL 54.72□□□□□ -1.659e-7■■■□□ 17.7
SUB1P53999 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.66□□□□□ -1.669e-7■■■□□ 17.7
SUB1P53999 SCML2-203ENST00000420857 2435 ntTSL 24.65□□□□□ -1.679e-7■■■□□ 17.7
SUB1P53999 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.759e-7■■■□□ 17.7
SUB1P53999 UGP2-211ENST00000475550 4397 ntTSL 1 (best)3.78□□□□□ -1.89e-7■■■□□ 17.7
SUB1P53999 ASCC1-219ENST00000534259 2422 ntTSL 23.75□□□□□ -1.819e-7■■■□□ 17.7
SUB1P53999 SCML2-204ENST00000491988 807 ntTSL 23.53□□□□□ -1.849e-7■■■□□ 17.7
SUB1P53999 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.24□□□□□ -1.899e-7■■■□□ 17.7
SUB1P53999 IPO11-213ENST00000512177 599 ntTSL 33.18□□□□□ -1.99e-7■■■□□ 17.7
SUB1P53999 TBC1D15-203ENST00000462788 1995 ntTSL 1 (best)3.14□□□□□ -1.919e-7■■■□□ 17.7
SUB1P53999 CYB5B-206ENST00000568237 577 ntTSL 53.04□□□□□ -1.929e-7■■■□□ 17.7
SUB1P53999 ASCC1-214ENST00000530394 839 ntTSL 52.94□□□□□ -1.949e-7■■■□□ 17.7
SUB1P53999 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.099e-7■■■□□ 17.7
SUB1P53999 FSCN1-205ENST00000473330 2215 ntTSL 216.46■□□□□ 0.235e-12■■■□□ 17.7
SUB1P53999 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.225e-12■■■□□ 17.7
SUB1P53999 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.212e-8■■■□□ 17.7
SUB1P53999 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.752e-8■■■□□ 17.7
SUB1P53999 TBCD-209ENST00000572794 1380 ntTSL 215.82■□□□□ 0.123e-6■■■□□ 17.6
SUB1P53999 TBCD-208ENST00000572389 776 ntTSL 212.99□□□□□ -0.333e-6■■■□□ 17.6
SUB1P53999 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.01□□□□□ -0.012e-6■■■□□ 17.6
SUB1P53999 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.092e-6■■■□□ 17.6
SUB1P53999 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.36□□□□□ -0.432e-6■■■□□ 17.6
SUB1P53999 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.462e-6■■■□□ 17.6
SUB1P53999 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.522e-6■■■□□ 17.6
SUB1P53999 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.77□□□□□ -0.532e-6■■■□□ 17.6
SUB1P53999 TPGS2-210ENST00000590258 2679 ntTSL 27.58□□□□□ -1.22e-6■■■□□ 17.6
SUB1P53999 TPGS2-206ENST00000587382 2079 ntTSL 36.22□□□□□ -1.412e-6■■■□□ 17.6
SUB1P53999 TPGS2-218ENST00000591906 936 ntTSL 35.53□□□□□ -1.522e-6■■■□□ 17.6
SUB1P53999 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.31□□□□□ -1.562e-6■■■□□ 17.6
SUB1P53999 TPGS2-213ENST00000590652 515 ntTSL 53.26□□□□□ -1.892e-6■■■□□ 17.6
SUB1P53999 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.537e-7■■■□□ 17.6
SUB1P53999 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.557e-7■■■□□ 17.6
SUB1P53999 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.752e-6■■■□□ 17.6
SUB1P53999 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.14□□□□□ -0.152e-7■■■□□ 17.6
SUB1P53999 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.792e-7■■■□□ 17.6
SUB1P53999 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC9.68□□□□□ -0.862e-7■■■□□ 17.6
SUB1P53999 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC9.4□□□□□ -0.912e-7■■■□□ 17.6
SUB1P53999 DAP3-202ENST00000368336 2089 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.942e-7■■■□□ 17.6
SUB1P53999 DAP3-221ENST00000491777 556 ntTSL 39.11□□□□□ -0.952e-7■■■□□ 17.6
SUB1P53999 DAP3-217ENST00000477394 816 ntTSL 57.14□□□□□ -1.272e-7■■■□□ 17.6
SUB1P53999 DAP3-215ENST00000475056 682 ntTSL 33.66□□□□□ -1.822e-7■■■□□ 17.6
SUB1P53999 DAP3-207ENST00000463295 607 ntTSL 53.32□□□□□ -1.882e-7■■■□□ 17.6
SUB1P53999 DAP3-220ENST00000490249 710 ntTSL 32.53□□□□□ -22e-7■■■□□ 17.6
SUB1P53999 DAP3-216ENST00000476444 679 ntTSL 22.43□□□□□ -2.022e-7■■■□□ 17.6
SUB1P53999 AHNAK-203ENST00000525875 793 ntTSL 38.24□□□□□ -1.091e-6■■■□□ 17.6
SUB1P53999 VIM-203ENST00000469543 2666 ntTSL 215.26■□□□□ 0.032e-9■■■□□ 17.6
SUB1P53999 VIM-209ENST00000544301 2135 ntAPPRIS P1 TSL 1 (best)14.53□□□□□ -0.082e-9■■■□□ 17.6
SUB1P53999 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.092e-9■■■□□ 17.6
SUB1P53999 VIM-206ENST00000487938 2272 ntTSL 514.46□□□□□ -0.092e-9■■■□□ 17.6
SUB1P53999 IRAK1-208ENST00000444230 1125 ntTSL 512.8□□□□□ -0.362e-6■■■□□ 17.6
SUB1P53999 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.532e-6■■■□□ 17.6
SUB1P53999 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC9.77□□□□□ -0.842e-6■■■□□ 17.6
SUB1P53999 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.674e-6■■■□□ 17.5
SUB1P53999 LSM6-207ENST00000515311 545 ntTSL 416.39■□□□□ 0.214e-6■■■□□ 17.5
SUB1P53999 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.434e-6■■■□□ 17.5
SUB1P53999 LSM6-204ENST00000504181 549 ntTSL 28.35□□□□□ -1.074e-6■■■□□ 17.5
SUB1P53999 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.539e-7■■■□□ 17.5
SUB1P53999 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.79e-7■■■□□ 17.5
SUB1P53999 FANCD2-204ENST00000421731 3425 ntTSL 1 (best)3.5□□□□□ -1.859e-7■■■□□ 17.5
SUB1P53999 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.35■□□□□ 0.854e-6■■■□□ 17.4
SUB1P53999 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.524e-6■■■□□ 17.4
SUB1P53999 CCT2-206ENST00000548787 852 ntTSL 22.87□□□□□ -1.952e-11■■■□□ 17.4
SUB1P53999 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.581e-8■■■□□ 17.4
SUB1P53999 RCC2-203ENST00000474892 783 ntTSL 310.62□□□□□ -0.711e-8■■■□□ 17.4
SUB1P53999 LARS-203ENST00000503654 534 ntTSL 46.32□□□□□ -1.45e-7■■■□□ 17.4
SUB1P53999 KMT2D-207ENST00000552391 860 ntTSL 512.19□□□□□ -0.462e-9■■■□□ 17.4
SUB1P53999 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.598e-9■■■□□ 17.4
SUB1P53999 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.628e-9■■■□□ 17.4
SUB1P53999 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.17□□□□□ -0.628e-9■■■□□ 17.4
SUB1P53999 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.78e-9■■■□□ 17.4
SUB1P53999 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC10.64□□□□□ -0.718e-9■■■□□ 17.4
SUB1P53999 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.728e-9■■■□□ 17.4
SUB1P53999 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.152e-7■■■□□ 17.4
SUB1P53999 PRMT1-214ENST00000529836 580 ntTSL 39.99□□□□□ -0.813e-6■■■□□ 17.4
SUB1P53999 PRMT1-206ENST00000526224 578 ntTSL 37.43□□□□□ -1.223e-6■■■□□ 17.4
Retrieved 100 of 11,644 protein–RNA pairs in 154.3 ms