RNA–Protein interactions for RNA: ENST00000548787.1

CCT2-206, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-206ENST00000548787 AEBP2Q6ZN18 517 aaPredicted RBP31.52■■■□□ 2.64
CCT2-206ENST00000548787 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
CCT2-206ENST00000548787 PHF23Q9BUL5 403 aaPredicted RBP27.04■■□□□ 1.92
CCT2-206ENST00000548787 SENP3Q9H4L4 574 aaPredicted RBP26.77■■□□□ 1.88
CCT2-206ENST00000548787 PLPPR3Q6T4P5 718 aa24.98■■□□□ 1.59
CCT2-206ENST00000548787 FOXD1Q16676 465 aa24.84■■□□□ 1.57
CCT2-206ENST00000548787 PPP6R1Q9UPN7 881 aa23.87■■□□□ 1.41
CCT2-206ENST00000548787 ADRA2BP18089 450 aa23.83■■□□□ 1.41
CCT2-206ENST00000548787 PIAS4Q8N2W9 510 aaPredicted RBP23.41■■□□□ 1.34
CCT2-206ENST00000548787 MSH5O43196 834 aa22.93■■□□□ 1.26
CCT2-206ENST00000548787 PPP4R3CPQ6ZMV5 832 aa22■■□□□ 1.11
CCT2-206ENST00000548787 SCAF1Q9H7N4 1312 aaKnown RBP21.84■■□□□ 1.09
CCT2-206ENST00000548787 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
CCT2-206ENST00000548787 KCNA4P22459 653 aa21.44■■□□□ 1.02
CCT2-206ENST00000548787 NCBP3Q53F19 620 aaKnown RBP21.41■■□□□ 1.02
CCT2-206ENST00000548787 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
CCT2-206ENST00000548787 DMRT2Q9Y5R5 561 aa21.37■■□□□ 1.01
CCT2-206ENST00000548787 POTEDQ86YR6 584 aa21.23■□□□□ 0.99
CCT2-206ENST00000548787 NPM3O75607 178 aaKnown RBP21.09■□□□□ 0.97
CCT2-206ENST00000548787 RNF216Q9NWF9 866 aaPredicted RBP20.99■□□□□ 0.95
CCT2-206ENST00000548787 HOXD11P31277 338 aaPredicted RBP20.92■□□□□ 0.94
CCT2-206ENST00000548787 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
CCT2-206ENST00000548787 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
CCT2-206ENST00000548787 DCAF8L1A6NGE4 600 aa20.4■□□□□ 0.86
CCT2-206ENST00000548787 SLC4A2P04920 1241 aa19.93■□□□□ 0.78
CCT2-206ENST00000548787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.78
CCT2-206ENST00000548787 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
CCT2-206ENST00000548787 FOXD4L1Q9NU39 408 aa19.75■□□□□ 0.75
CCT2-206ENST00000548787 ZBTB22O15209 634 aa19.72■□□□□ 0.75
CCT2-206ENST00000548787 RNF39Q9H2S5 420 aa19.64■□□□□ 0.73
CCT2-206ENST00000548787 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
CCT2-206ENST00000548787 U3KPZ7 1027 aaPredicted RBP19.59■□□□□ 0.73
CCT2-206ENST00000548787 MYCNP04198 464 aaPredicted RBP19.5■□□□□ 0.71
CCT2-206ENST00000548787 C1QBPQ07021 282 aaKnown RBP19.42■□□□□ 0.7
CCT2-206ENST00000548787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.35■□□□□ 0.69
CCT2-206ENST00000548787 HNRNPUL2Q1KMD3 747 aaKnown RBP19.35■□□□□ 0.69
CCT2-206ENST00000548787 SAMD1Q6SPF0 538 aaPredicted RBP19.28■□□□□ 0.68
CCT2-206ENST00000548787 APLP2Q06481 763 aa19.16■□□□□ 0.66
CCT2-206ENST00000548787 CACNB1Q02641 598 aaPredicted RBP19.14■□□□□ 0.65
CCT2-206ENST00000548787 ATXN8OSP0DMR3 200 aa19.09■□□□□ 0.65
CCT2-206ENST00000548787 SPINK5Q9NQ38 1064 aaPredicted RBP19.04■□□□□ 0.64
CCT2-206ENST00000548787 ATF5Q9Y2D1 282 aaPredicted RBP18.97■□□□□ 0.63
CCT2-206ENST00000548787 CAPN15O75808 1086 aa18.96■□□□□ 0.63
CCT2-206ENST00000548787 ZNF219Q9P2Y4 722 aaPredicted RBP18.89■□□□□ 0.61
CCT2-206ENST00000548787 TRHP20396 242 aaPredicted RBP18.87■□□□□ 0.61
CCT2-206ENST00000548787 DSG3P32926 999 aa18.67■□□□□ 0.58
CCT2-206ENST00000548787 ABCB7O75027 752 aa18.59■□□□□ 0.57
CCT2-206ENST00000548787 POLA2Q14181 598 aa18.57■□□□□ 0.56
CCT2-206ENST00000548787 ZBTB12Q9Y330 459 aaPredicted RBP18.28■□□□□ 0.52
CCT2-206ENST00000548787 FBLN2P98095 1184 aa18.18■□□□□ 0.5
CCT2-206ENST00000548787 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
CCT2-206ENST00000548787 OSCARQ8IYS5 282 aa17.93■□□□□ 0.46
CCT2-206ENST00000548787 RBM42Q9BTD8 480 aaKnown RBP17.81■□□□□ 0.44
CCT2-206ENST00000548787 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
CCT2-206ENST00000548787 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
CCT2-206ENST00000548787 SPDYE2Q495Y8 402 aa17.78■□□□□ 0.44
CCT2-206ENST00000548787 SPDYE4A6NLX3 237 aa17.72■□□□□ 0.43
CCT2-206ENST00000548787 FKBP8Q14318 412 aa17.7■□□□□ 0.42
CCT2-206ENST00000548787 ZNF692Q9BU19 519 aaPredicted RBP17.69■□□□□ 0.42
CCT2-206ENST00000548787 SSUH2Q9Y2M2 353 aa17.64■□□□□ 0.41
CCT2-206ENST00000548787 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
CCT2-206ENST00000548787 PABPN1Q86U42 306 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCT2-206ENST00000548787 PROM2Q8N271 834 aa17.45■□□□□ 0.38
CCT2-206ENST00000548787 REM2Q8IYK8 340 aaPredicted RBP17.4■□□□□ 0.38
CCT2-206ENST00000548787 SPDYE1Q8NFV5 336 aaPredicted RBP17.26■□□□□ 0.35
CCT2-206ENST00000548787 PITPNM1O00562 1244 aa17.2■□□□□ 0.34
CCT2-206ENST00000548787 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
CCT2-206ENST00000548787 CLEC11AQ9Y240 323 aa17.16■□□□□ 0.34
CCT2-206ENST00000548787 FBXO3Q9UK99 471 aa17.11■□□□□ 0.33
CCT2-206ENST00000548787 CHRDL2Q6WN34 429 aa17.07■□□□□ 0.32
CCT2-206ENST00000548787 PRR29P0C7W0 189 aa17.02■□□□□ 0.32
CCT2-206ENST00000548787 FXR2P51116 673 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCT2-206ENST00000548787 VASPP50552 380 aaPredicted RBP16.86■□□□□ 0.29
CCT2-206ENST00000548787 PIP4P2Q8N4L2 257 aa16.84■□□□□ 0.29
CCT2-206ENST00000548787 MIER1Q8N108 512 aa16.8■□□□□ 0.28
CCT2-206ENST00000548787 CREBZFQ9NS37 354 aa16.79■□□□□ 0.28
CCT2-206ENST00000548787 PLCD3Q8N3E9 789 aa16.77■□□□□ 0.28
CCT2-206ENST00000548787 PRKAR2AP13861 404 aaKnown RBP16.76■□□□□ 0.27
CCT2-206ENST00000548787 PLEKHG5O94827 1062 aa16.74■□□□□ 0.27
CCT2-206ENST00000548787 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
CCT2-206ENST00000548787 MNX1P50219 401 aaPredicted RBP16.63■□□□□ 0.25
CCT2-206ENST00000548787 IFNLR1Q8IU57 520 aaPredicted RBP16.62■□□□□ 0.25
CCT2-206ENST00000548787 ZBTB47Q9UFB7 747 aaPredicted RBP16.61■□□□□ 0.25
CCT2-206ENST00000548787 FARP1Q9Y4F1 1045 aaPredicted RBP16.6■□□□□ 0.25
CCT2-206ENST00000548787 POTEHQ6S545 545 aa16.58■□□□□ 0.24
CCT2-206ENST00000548787 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
CCT2-206ENST00000548787 NPM1P06748 294 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCT2-206ENST00000548787 SPOCK2Q92563 424 aa16.44■□□□□ 0.22
CCT2-206ENST00000548787 NUBP1P53384 320 aa16.39■□□□□ 0.21
CCT2-206ENST00000548787 C19orf67A6NJJ6 358 aa16.32■□□□□ 0.2
CCT2-206ENST00000548787 RASEFQ8IZ41 740 aa16.32■□□□□ 0.2
CCT2-206ENST00000548787 HAX1O00165 279 aa16.3■□□□□ 0.2
CCT2-206ENST00000548787 CD44P16070 742 aaKnown RBP16.28■□□□□ 0.2
CCT2-206ENST00000548787 FAM212AQ96EL1 285 aa16.26■□□□□ 0.19
CCT2-206ENST00000548787 PAK3O75914 559 aaPredicted RBP16.24■□□□□ 0.19
CCT2-206ENST00000548787 DCAF8Q5TAQ9 597 aa16.22■□□□□ 0.19
CCT2-206ENST00000548787 TSPYL2Q9H2G4 693 aaPredicted RBP16.22■□□□□ 0.19
CCT2-206ENST00000548787 GSE1Q14687 1217 aa16.2■□□□□ 0.18
CCT2-206ENST00000548787 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
CCT2-206ENST00000548787 CIZ1Q9ULV3 898 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms