Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCP4P48539 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PCP4P48539 AC142472.1-201ENST00000612013 1741 ntBASIC13.78□□□□□ -0.2
PCP4P48539 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.78□□□□□ -0.2
PCP4P48539 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.78□□□□□ -0.2
PCP4P48539 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 AC079630.1-202ENST00000618127 1840 ntBASIC13.78□□□□□ -0.2
PCP4P48539 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.78□□□□□ -0.2
PCP4P48539 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 AC100803.2-201ENST00000562459 1963 ntBASIC13.78□□□□□ -0.2
PCP4P48539 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 AC018358.1-201ENST00000631079 1402 ntBASIC13.78□□□□□ -0.2
PCP4P48539 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.78□□□□□ -0.2
PCP4P48539 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.78□□□□□ -0.2
PCP4P48539 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PCP4P48539 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
PCP4P48539 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.78□□□□□ -0.2
PCP4P48539 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCP4P48539 CICP4-201ENST00000447359 2812 ntBASIC13.77□□□□□ -0.2
PCP4P48539 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCP4P48539 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCP4P48539 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.77□□□□□ -0.2
PCP4P48539 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCP4P48539 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PCP4P48539 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PCP4P48539 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCP4P48539 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
PCP4P48539 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PCP4P48539 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PCP4P48539 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
PCP4P48539 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCP4P48539 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PCP4P48539 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PCP4P48539 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCP4P48539 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCP4P48539 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCP4P48539 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC13.77□□□□□ -0.21
PCP4P48539 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCP4P48539 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCP4P48539 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCP4P48539 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCP4P48539 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCP4P48539 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCP4P48539 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
PCP4P48539 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PCP4P48539 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC13.76□□□□□ -0.21
PCP4P48539 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PCP4P48539 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.76□□□□□ -0.21
PCP4P48539 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.76□□□□□ -0.21
PCP4P48539 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PCP4P48539 AC009113.1-201ENST00000570267 2443 ntBASIC13.76□□□□□ -0.21
PCP4P48539 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.76□□□□□ -0.21
PCP4P48539 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PCP4P48539 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCP4P48539 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PCP4P48539 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 AL671710.1-201ENST00000610245 2349 ntBASIC13.75□□□□□ -0.21
PCP4P48539 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.75□□□□□ -0.21
PCP4P48539 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.75□□□□□ -0.21
PCP4P48539 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
PCP4P48539 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.75□□□□□ -0.21
PCP4P48539 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms