Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA2A8K830 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA2A8K830 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA2A8K830 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
COLCA2A8K830 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 AL031598.1-201ENST00000561511 1773 ntBASIC15.31■□□□□ 0.04
COLCA2A8K830 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.31■□□□□ 0.04
COLCA2A8K830 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
COLCA2A8K830 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.31■□□□□ 0.04
COLCA2A8K830 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
COLCA2A8K830 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 AF131216.4-201ENST00000638924 1588 ntBASIC15.31■□□□□ 0.04
COLCA2A8K830 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA2A8K830 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.31■□□□□ 0.04
COLCA2A8K830 AC008764.6-201ENST00000595909 2069 ntBASIC15.31■□□□□ 0.04
COLCA2A8K830 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.31■□□□□ 0.04
COLCA2A8K830 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA2A8K830 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
COLCA2A8K830 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COLCA2A8K830 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC15.3■□□□□ 0.04
COLCA2A8K830 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COLCA2A8K830 MST1L-201ENST00000442552 2185 ntBASIC15.3■□□□□ 0.04
COLCA2A8K830 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC15.3■□□□□ 0.04
COLCA2A8K830 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
COLCA2A8K830 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.3■□□□□ 0.04
COLCA2A8K830 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 AC087393.1-201ENST00000582896 145 ntBASIC15.3■□□□□ 0.04
COLCA2A8K830 AC007029.1-201ENST00000604183 313 ntBASIC15.3■□□□□ 0.04
COLCA2A8K830 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COLCA2A8K830 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA2A8K830 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
COLCA2A8K830 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.3■□□□□ 0.04
COLCA2A8K830 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA2A8K830 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.29■□□□□ 0.04
COLCA2A8K830 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA2A8K830 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
COLCA2A8K830 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
COLCA2A8K830 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.29■□□□□ 0.04
COLCA2A8K830 ABALON-201ENST00000629058 1903 ntBASIC15.29■□□□□ 0.04
COLCA2A8K830 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA2A8K830 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.29■□□□□ 0.04
COLCA2A8K830 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA2A8K830 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.29■□□□□ 0.04
COLCA2A8K830 AL162727.3-201ENST00000635661 2787 ntBASIC15.29■□□□□ 0.04
COLCA2A8K830 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA2A8K830 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
COLCA2A8K830 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA2A8K830 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
COLCA2A8K830 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.29■□□□□ 0.04
COLCA2A8K830 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.29■□□□□ 0.04
COLCA2A8K830 AC080080.1-201ENST00000625121 2420 ntBASIC15.29■□□□□ 0.04
COLCA2A8K830 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.29■□□□□ 0.04
COLCA2A8K830 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.29■□□□□ 0.04
COLCA2A8K830 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
COLCA2A8K830 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COLCA2A8K830 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
COLCA2A8K830 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA2A8K830 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA2A8K830 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.28■□□□□ 0.04
COLCA2A8K830 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA2A8K830 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA2A8K830 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
COLCA2A8K830 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA2A8K830 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.28■□□□□ 0.04
COLCA2A8K830 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
COLCA2A8K830 AC126763.1-201ENST00000552015 2118 ntBASIC15.28■□□□□ 0.04
COLCA2A8K830 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA2A8K830 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA2A8K830 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.28■□□□□ 0.04
COLCA2A8K830 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA2A8K830 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA2A8K830 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.28■□□□□ 0.04
COLCA2A8K830 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.28■□□□□ 0.04
COLCA2A8K830 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA2A8K830 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA2A8K830 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms