Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 AC110285.6-201ENST00000617652 491 ntBASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 SLC7A5P2-201ENST00000553010 536 ntBASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 DUX4L2-201ENST00000561772 1275 ntBASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 DUX4L6-201ENST00000626483 1275 ntBASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 DUX4L1-201ENST00000627662 1275 ntBASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 DUX4L8-201ENST00000629013 1275 ntBASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 DUX4L3-201ENST00000630187 1275 ntBASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 DUX4L7-201ENST00000630678 1275 ntBASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 DUX4L5-201ENST00000630834 1275 ntBASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-1A0A0B4J241 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 AL691432.2-201ENST00000607222 2038 ntBASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 AC098818.2-201ENST00000564925 2320 ntBASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV13-1A0A0B4J241 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms