Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SDR39U1-204ENST00000553343 681 ntTSL 216.98■□□□□ 0.313e-22■□□□□ 9.6
PRPF8Q6P2Q9 DPH1-202ENST00000263084 557 ntTSL 316.78■□□□□ 0.283e-13■□□□□ 9.6
PRPF8Q6P2Q9 NAGK-221ENST00000497690 553 ntTSL 216.27■□□□□ 0.29e-8■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-203ENST00000544691 1507 ntTSL 1 (best)16.21■□□□□ 0.193e-22■□□□□ 9.6
PRPF8Q6P2Q9 DPH1-209ENST00000572248 535 ntTSL 215.99■□□□□ 0.153e-13■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-210ENST00000555225 769 ntTSL 315.62■□□□□ 0.093e-22■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-219ENST00000556523 735 ntTSL 315.42■□□□□ 0.063e-22■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.063e-22■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.01□□□□□ -0.013e-22■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-218ENST00000556262 1960 ntTSL 214.9□□□□□ -0.023e-22■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.77□□□□□ -0.053e-22■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-220ENST00000556548 2336 ntTSL 214.34□□□□□ -0.113e-22■□□□□ 9.6
PRPF8Q6P2Q9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.153e-13■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-217ENST00000556249 556 ntTSL 314.09□□□□□ -0.153e-22■□□□□ 9.6
PRPF8Q6P2Q9 DPH1-210ENST00000572684 2607 ntTSL 213.57□□□□□ -0.243e-13■□□□□ 9.6
PRPF8Q6P2Q9 DPH1-217ENST00000607788 775 ntTSL 513.53□□□□□ -0.243e-13■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-215ENST00000555830 418 ntTSL 313.3□□□□□ -0.283e-22■□□□□ 9.6
PRPF8Q6P2Q9 PPP6R3-208ENST00000525152 582 ntTSL 212.87□□□□□ -0.359e-8■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.5□□□□□ -0.413e-22■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-211ENST00000555355 934 ntTSL 212.26□□□□□ -0.453e-22■□□□□ 9.6
PRPF8Q6P2Q9 TNFAIP3-204ENST00000433680 465 ntTSL 312.22□□□□□ -0.459e-8■□□□□ 9.6
PRPF8Q6P2Q9 CDHR2-204ENST00000508085 577 ntTSL 211.93□□□□□ -0.54e-10■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-214ENST00000555778 608 ntTSL 211.86□□□□□ -0.513e-22■□□□□ 9.6
PRPF8Q6P2Q9 C6orf136-208ENST00000467801 583 ntTSL 211.84□□□□□ -0.519e-8■□□□□ 9.6
PRPF8Q6P2Q9 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC11.58□□□□□ -0.569e-8■□□□□ 9.6
PRPF8Q6P2Q9 ARPC1B-215ENST00000468337 890 nt11.09□□□□□ -0.639e-8■□□□□ 9.6
PRPF8Q6P2Q9 NUBP1-207ENST00000574334 582 ntTSL 310.72□□□□□ -0.699e-8■□□□□ 9.6
PRPF8Q6P2Q9 PPP6R3-221ENST00000530734 576 ntTSL 39.94□□□□□ -0.829e-8■□□□□ 9.6
PRPF8Q6P2Q9 PBX2-203ENST00000480254 580 ntTSL 29.13□□□□□ -0.955e-9■□□□□ 9.6
PRPF8Q6P2Q9 C6orf136-205ENST00000460172 253 ntTSL 29.05□□□□□ -0.969e-8■□□□□ 9.6
PRPF8Q6P2Q9 C6orf136-209ENST00000468785 492 ntTSL 28.82□□□□□ -19e-8■□□□□ 9.6
PRPF8Q6P2Q9 SH2D4A-203ENST00000518093 569 ntTSL 41.65□□□□□ -2.159e-8■□□□□ 9.6
PRPF8Q6P2Q9 YIPF3-215ENST00000511831 566 ntTSL 49.26□□□□□ -0.935e-8■□□□□ 9.6
PRPF8Q6P2Q9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.89■□□□□ 0.463e-13■□□□□ 9.6
PRPF8Q6P2Q9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.01□□□□□ -0.175e-7■□□□□ 9.6
PRPF8Q6P2Q9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.175e-7■□□□□ 9.6
PRPF8Q6P2Q9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.01□□□□□ -0.175e-7■□□□□ 9.6
PRPF8Q6P2Q9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.255e-7■□□□□ 9.6
PRPF8Q6P2Q9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.42□□□□□ -0.265e-7■□□□□ 9.6
PRPF8Q6P2Q9 IFFO1-209ENST00000487279 2786 ntTSL 1 (best)12.16□□□□□ -0.465e-7■□□□□ 9.6
PRPF8Q6P2Q9 IFFO1-210ENST00000488007 3001 ntTSL 510.65□□□□□ -0.75e-7■□□□□ 9.6
PRPF8Q6P2Q9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.342e-7■□□□□ 9.6
PRPF8Q6P2Q9 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.382e-7■□□□□ 9.6
PRPF8Q6P2Q9 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.42e-7■□□□□ 9.6
PRPF8Q6P2Q9 P3H4-206ENST00000587455 536 ntTSL 311.66□□□□□ -0.542e-7■□□□□ 9.6
PRPF8Q6P2Q9 PIEZO1-207ENST00000475586 560 ntTSL 415.55■□□□□ 0.081e-6■□□□□ 9.6
PRPF8Q6P2Q9 SNORD61-201ENST00000384252 73 ntBASIC-1.74□□□□□ -2.696e-11■□□□□ 9.6
PRPF8Q6P2Q9 PLD2-203ENST00000572127 632 ntTSL 214.02□□□□□ -0.164e-6■□□□□ 9.6
PRPF8Q6P2Q9 SLC7A6-212ENST00000567325 658 ntTSL 28.08□□□□□ -1.126e-7■□□□□ 9.6
PRPF8Q6P2Q9 ATXN2L-209ENST00000562686 489 ntTSL 310.42□□□□□ -0.742e-23■□□□□ 9.6
PRPF8Q6P2Q9 OXCT1-208ENST00000514723 241 ntTSL 55.46□□□□□ -1.543e-6■□□□□ 9.6
PRPF8Q6P2Q9 ATP5A1-216ENST00000591267 460 ntTSL 517.98■□□□□ 0.471e-8■□□□□ 9.6
PRPF8Q6P2Q9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.274e-6■□□□□ 9.6
PRPF8Q6P2Q9 CHCHD10-203ENST00000517886 494 ntTSL 316.76■□□□□ 0.274e-6■□□□□ 9.6
PRPF8Q6P2Q9 ATP5A1-207ENST00000588390 556 ntTSL 1 (best)16.75■□□□□ 0.271e-8■□□□□ 9.6
PRPF8Q6P2Q9 PELI1-203ENST00000468869 553 ntTSL 416.71■□□□□ 0.271e-8■□□□□ 9.6
PRPF8Q6P2Q9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.52■□□□□ 0.244e-6■□□□□ 9.6
PRPF8Q6P2Q9 SCFD1-224ENST00000557713 556 ntTSL 413.77□□□□□ -0.211e-8■□□□□ 9.6
PRPF8Q6P2Q9 CAPZB-208ENST00000482808 660 ntTSL 213.72□□□□□ -0.211e-8■□□□□ 9.6
PRPF8Q6P2Q9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.291e-8■□□□□ 9.6
PRPF8Q6P2Q9 CAPZB-209ENST00000489607 488 ntTSL 512.71□□□□□ -0.371e-8■□□□□ 9.6
PRPF8Q6P2Q9 GGA3-208ENST00000579743 560 ntTSL 411.77□□□□□ -0.521e-8■□□□□ 9.6
PRPF8Q6P2Q9 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.571e-8■□□□□ 9.6
PRPF8Q6P2Q9 NCAPD2-203ENST00000535804 537 ntTSL 311.4□□□□□ -0.581e-8■□□□□ 9.6
PRPF8Q6P2Q9 TPT1-AS1-204ENST00000434849 2369 ntTSL 211.01□□□□□ -0.651e-8■□□□□ 9.6
PRPF8Q6P2Q9 CAPZB-206ENST00000457768 432 ntTSL 310.56□□□□□ -0.721e-8■□□□□ 9.6
PRPF8Q6P2Q9 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC10.45□□□□□ -0.744e-6■□□□□ 9.6
PRPF8Q6P2Q9 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC9.99□□□□□ -0.811e-8■□□□□ 9.6
PRPF8Q6P2Q9 SNRPD1-203ENST00000579618 320 ntTSL 5 BASIC8.82□□□□□ -11e-8■□□□□ 9.6
PRPF8Q6P2Q9 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.341e-8■□□□□ 9.6
PRPF8Q6P2Q9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.35□□□□□ -1.871e-8■□□□□ 9.6
PRPF8Q6P2Q9 CREBZF-206ENST00000528561 1099 ntTSL 516.35■□□□□ 0.217e-20■□□□□ 9.6
PRPF8Q6P2Q9 CREBZF-201ENST00000260058 1431 ntTSL 213.96□□□□□ -0.177e-20■□□□□ 9.6
PRPF8Q6P2Q9 CREBZF-203ENST00000525639 2850 ntTSL 513.84□□□□□ -0.197e-20■□□□□ 9.6
PRPF8Q6P2Q9 CREBZF-205ENST00000527529 898 ntTSL 512.44□□□□□ -0.427e-20■□□□□ 9.6
PRPF8Q6P2Q9 CREBZF-208ENST00000531515 724 ntTSL 312.42□□□□□ -0.427e-20■□□□□ 9.6
PRPF8Q6P2Q9 CREBZF-202ENST00000490820 4329 ntTSL 1 (best)11.87□□□□□ -0.517e-20■□□□□ 9.6
PRPF8Q6P2Q9 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.51□□□□□ -0.577e-20■□□□□ 9.6
PRPF8Q6P2Q9 CREBZF-207ENST00000528889 745 ntTSL 35.96□□□□□ -1.467e-20■□□□□ 9.6
PRPF8Q6P2Q9 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.42□□□□□ -1.77e-20■□□□□ 9.6
PRPF8Q6P2Q9 TEPSIN-204ENST00000571115 551 ntTSL 312.29□□□□□ -0.441e-7■□□□□ 9.6
PRPF8Q6P2Q9 MLXIPL-208ENST00000456640 706 ntTSL 514.41□□□□□ -0.12e-30■□□□□ 9.6
PRPF8Q6P2Q9 EXOC3L4-202ENST00000559116 460 ntTSL 514.18□□□□□ -0.145e-16■□□□□ 9.6
PRPF8Q6P2Q9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.52■□□□□ 0.248e-12■□□□□ 9.6
PRPF8Q6P2Q9 AC093752.1-203ENST00000504422 563 ntTSL 214.12□□□□□ -0.158e-12■□□□□ 9.6
PRPF8Q6P2Q9 AC093752.1-205ENST00000515251 569 ntTSL 314.12□□□□□ -0.158e-12■□□□□ 9.6
PRPF8Q6P2Q9 IFFO1-203ENST00000396830 1776 ntTSL 1 (best)14.05□□□□□ -0.169e-8■□□□□ 9.6
PRPF8Q6P2Q9 IFFO1-208ENST00000472558 2571 ntTSL 210.09□□□□□ -0.799e-8■□□□□ 9.6
PRPF8Q6P2Q9 MBOAT2-209ENST00000486484 1351 ntTSL 23.29□□□□□ -1.881e-6■□□□□ 9.6
PRPF8Q6P2Q9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.244e-8■□□□□ 9.6
PRPF8Q6P2Q9 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.334e-8■□□□□ 9.6
PRPF8Q6P2Q9 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.384e-8■□□□□ 9.6
PRPF8Q6P2Q9 IFITM3-203ENST00000531688 500 ntTSL 39.42□□□□□ -0.94e-8■□□□□ 9.6
PRPF8Q6P2Q9 TIA1-209ENST00000474699 686 ntTSL 23.08□□□□□ -1.922e-9■□□□□ 9.6
PRPF8Q6P2Q9 PNPLA6-210ENST00000595176 999 ntTSL 315.13■□□□□ 0.012e-7■□□□□ 9.6
PRPF8Q6P2Q9 PNPLA6-217ENST00000599311 1005 ntTSL 514.87□□□□□ -0.032e-7■□□□□ 9.6
PRPF8Q6P2Q9 HSP90AA1-210ENST00000560130 488 ntTSL 22.28□□□□□ -2.046e-11■□□□□ 9.6
PRPF8Q6P2Q9 SAMD10-202ENST00000450107 493 ntTSL 322.99■■□□□ 1.272e-7■□□□□ 9.6
PRPF8Q6P2Q9 PLIN2-205ENST00000464326 790 ntTSL 20.01□□□□□ -2.412e-7■□□□□ 9.6
PRPF8Q6P2Q9 TTC17-211ENST00000530483 456 ntTSL 22.68□□□□□ -1.985e-6■□□□□ 9.6
Retrieved 100 of 73,762 protein–RNA pairs in 499.1 ms