RNA–Protein interactions for RNA: ENST00000518093.1

SH2D4A-203, Transcript of SH2 domain containing 4A, humanhuman

TSL 4

Gene SH2D4A, Length 569 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-203ENST00000518093 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
SH2D4A-203ENST00000518093 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
SH2D4A-203ENST00000518093 PHF23Q9BUL5 403 aaPredicted RBP18.33■□□□□ 0.52
SH2D4A-203ENST00000518093 SENP3Q9H4L4 574 aaPredicted RBP18.28■□□□□ 0.52
SH2D4A-203ENST00000518093 FOXD1Q16676 465 aa17.05■□□□□ 0.32
SH2D4A-203ENST00000518093 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
SH2D4A-203ENST00000518093 PPP6R1Q9UPN7 881 aa16.27■□□□□ 0.2
SH2D4A-203ENST00000518093 ADRA2BP18089 450 aa16.23■□□□□ 0.19
SH2D4A-203ENST00000518093 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
SH2D4A-203ENST00000518093 MSH5O43196 834 aa15.75■□□□□ 0.11
SH2D4A-203ENST00000518093 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
SH2D4A-203ENST00000518093 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
SH2D4A-203ENST00000518093 SCAF1Q9H7N4 1312 aaKnown RBP14.78□□□□□ -0.04
SH2D4A-203ENST00000518093 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
SH2D4A-203ENST00000518093 DMRT2Q9Y5R5 561 aa14.58□□□□□ -0.08
SH2D4A-203ENST00000518093 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
SH2D4A-203ENST00000518093 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
SH2D4A-203ENST00000518093 KCNA4P22459 653 aa14.22□□□□□ -0.13
SH2D4A-203ENST00000518093 HOXD11P31277 338 aaPredicted RBP14.18□□□□□ -0.14
SH2D4A-203ENST00000518093 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
SH2D4A-203ENST00000518093 NPM3O75607 178 aaKnown RBP14.14□□□□□ -0.15
SH2D4A-203ENST00000518093 DCAF8L1A6NGE4 600 aa13.99□□□□□ -0.17
SH2D4A-203ENST00000518093 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
SH2D4A-203ENST00000518093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
SH2D4A-203ENST00000518093 RNF39Q9H2S5 420 aa13.5□□□□□ -0.25
SH2D4A-203ENST00000518093 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
SH2D4A-203ENST00000518093 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
SH2D4A-203ENST00000518093 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.28
SH2D4A-203ENST00000518093 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
SH2D4A-203ENST00000518093 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
SH2D4A-203ENST00000518093 ZBTB22O15209 634 aa13.1□□□□□ -0.31
SH2D4A-203ENST00000518093 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
SH2D4A-203ENST00000518093 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
SH2D4A-203ENST00000518093 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
SH2D4A-203ENST00000518093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
SH2D4A-203ENST00000518093 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
SH2D4A-203ENST00000518093 CAPN15O75808 1086 aa12.95□□□□□ -0.34
SH2D4A-203ENST00000518093 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
SH2D4A-203ENST00000518093 APLP2Q06481 763 aa12.89□□□□□ -0.35
SH2D4A-203ENST00000518093 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
SH2D4A-203ENST00000518093 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
SH2D4A-203ENST00000518093 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
SH2D4A-203ENST00000518093 DSG3P32926 999 aa12.78□□□□□ -0.36
SH2D4A-203ENST00000518093 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
SH2D4A-203ENST00000518093 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
SH2D4A-203ENST00000518093 ABCB7O75027 752 aa12.72□□□□□ -0.37
SH2D4A-203ENST00000518093 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
SH2D4A-203ENST00000518093 POLA2Q14181 598 aa12.59□□□□□ -0.39
SH2D4A-203ENST00000518093 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
SH2D4A-203ENST00000518093 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
SH2D4A-203ENST00000518093 FBLN2P98095 1184 aa12.18□□□□□ -0.46
SH2D4A-203ENST00000518093 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
SH2D4A-203ENST00000518093 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
SH2D4A-203ENST00000518093 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
SH2D4A-203ENST00000518093 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
SH2D4A-203ENST00000518093 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
SH2D4A-203ENST00000518093 AKT1S1Q96B36 256 aa11.96□□□□□ -0.49
SH2D4A-203ENST00000518093 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
SH2D4A-203ENST00000518093 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
SH2D4A-203ENST00000518093 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
SH2D4A-203ENST00000518093 SPDYE4A6NLX3 237 aa11.79□□□□□ -0.52
SH2D4A-203ENST00000518093 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
SH2D4A-203ENST00000518093 PABPN1Q86U42 306 aaKnown RBP eCLIP11.76□□□□□ -0.53
SH2D4A-203ENST00000518093 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
SH2D4A-203ENST00000518093 SPDYE1Q8NFV5 336 aaPredicted RBP11.67□□□□□ -0.54
SH2D4A-203ENST00000518093 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
SH2D4A-203ENST00000518093 POTEHQ6S545 545 aa11.65□□□□□ -0.54
SH2D4A-203ENST00000518093 FKBP8Q14318 412 aa11.59□□□□□ -0.55
SH2D4A-203ENST00000518093 PIP4P2Q8N4L2 257 aa11.58□□□□□ -0.56
SH2D4A-203ENST00000518093 FXR2P51116 673 aaKnown RBP eCLIP11.56□□□□□ -0.56
SH2D4A-203ENST00000518093 PROM2Q8N271 834 aa11.53□□□□□ -0.56
SH2D4A-203ENST00000518093 PRR29P0C7W0 189 aa11.52□□□□□ -0.57
SH2D4A-203ENST00000518093 STAG3Q9UJ98 1225 aa11.47□□□□□ -0.57
SH2D4A-203ENST00000518093 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
SH2D4A-203ENST00000518093 CHADLQ6NUI6 762 aa11.43□□□□□ -0.58
SH2D4A-203ENST00000518093 CREBZFQ9NS37 354 aa11.33□□□□□ -0.6
SH2D4A-203ENST00000518093 HAX1O00165 279 aa11.28□□□□□ -0.6
SH2D4A-203ENST00000518093 FARP1Q9Y4F1 1045 aaPredicted RBP11.27□□□□□ -0.61
SH2D4A-203ENST00000518093 MIER1Q8N108 512 aa11.22□□□□□ -0.61
SH2D4A-203ENST00000518093 EVX2Q03828 476 aa11.2□□□□□ -0.62
SH2D4A-203ENST00000518093 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
SH2D4A-203ENST00000518093 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
SH2D4A-203ENST00000518093 C19orf67A6NJJ6 358 aa11.17□□□□□ -0.62
SH2D4A-203ENST00000518093 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
SH2D4A-203ENST00000518093 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
SH2D4A-203ENST00000518093 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
SH2D4A-203ENST00000518093 CD44P16070 742 aaKnown RBP11.1□□□□□ -0.63
SH2D4A-203ENST00000518093 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
SH2D4A-203ENST00000518093 VASPP50552 380 aaPredicted RBP11.08□□□□□ -0.64
SH2D4A-203ENST00000518093 ZRANB1Q9UGI0 708 aa11.02□□□□□ -0.65
SH2D4A-203ENST00000518093 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
SH2D4A-203ENST00000518093 KLHL34Q8N239 644 aa10.97□□□□□ -0.65
SH2D4A-203ENST00000518093 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.65
SH2D4A-203ENST00000518093 RASEFQ8IZ41 740 aa10.96□□□□□ -0.65
SH2D4A-203ENST00000518093 TSPYL2Q9H2G4 693 aaPredicted RBP10.96□□□□□ -0.65
SH2D4A-203ENST00000518093 NUBP1P53384 320 aa10.94□□□□□ -0.66
SH2D4A-203ENST00000518093 IFNLR1Q8IU57 520 aaPredicted RBP10.94□□□□□ -0.66
SH2D4A-203ENST00000518093 GABBR2O75899 941 aa10.93□□□□□ -0.66
SH2D4A-203ENST00000518093 ZNF579Q8NAF0 562 aaKnown RBP10.93□□□□□ -0.66
SH2D4A-203ENST00000518093 PHF12Q96QT6 1004 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms