Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 TIRAP-205ENST00000467006 567 ntTSL 46.63□□□□□ -1.354e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-208ENST00000546649 2097 ntTSL 26.62□□□□□ -1.354e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-210ENST00000508216 1794 ntTSL 2 BASIC6.22□□□□□ -1.414e-6■□□□□ 9.7
PRPF8Q6P2Q9 UBE2B-204ENST00000504431 235 ntTSL 26.12□□□□□ -1.434e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC6.02□□□□□ -1.454e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLXNC1-210ENST00000551495 564 ntTSL 55.99□□□□□ -1.454e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.464e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC5.76□□□□□ -1.494e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.68□□□□□ -1.54e-6■□□□□ 9.7
PRPF8Q6P2Q9 MCM3AP-205ENST00000479557 364 ntTSL 25.58□□□□□ -1.522e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC5.44□□□□□ -1.544e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC5.44□□□□□ -1.544e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.574e-6■□□□□ 9.7
PRPF8Q6P2Q9 CSTF1-202ENST00000415828 1236 ntTSL 25.17□□□□□ -1.584e-6■□□□□ 9.7
PRPF8Q6P2Q9 CSTF1-207ENST00000498689 585 ntTSL 1 (best)5.17□□□□□ -1.584e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL2-205ENST00000491050 559 ntTSL 45.13□□□□□ -1.594e-6■□□□□ 9.7
PRPF8Q6P2Q9 COBLL1-214ENST00000460238 580 ntTSL 24.83□□□□□ -1.643e-10■□□□□ 9.7
PRPF8Q6P2Q9 CSTF1-204ENST00000452950 1233 ntTSL 34.45□□□□□ -1.74e-6■□□□□ 9.7
PRPF8Q6P2Q9 CYFIP1-201ENST00000557890 408 ntTSL 24.07□□□□□ -1.764e-6■□□□□ 9.7
PRPF8Q6P2Q9 CSTF1-205ENST00000490539 929 ntTSL 53.97□□□□□ -1.774e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-214ENST00000510099 554 ntTSL 43.67□□□□□ -1.824e-6■□□□□ 9.7
PRPF8Q6P2Q9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.874e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-218ENST00000513341 794 ntTSL 33.35□□□□□ -1.874e-6■□□□□ 9.7
PRPF8Q6P2Q9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.884e-6■□□□□ 9.7
PRPF8Q6P2Q9 PIP5K1A-215ENST00000486048 508 ntTSL 33.24□□□□□ -1.894e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-211ENST00000508531 480 ntTSL 43.2□□□□□ -1.94e-6■□□□□ 9.7
PRPF8Q6P2Q9 RPN1-205ENST00000490166 573 ntTSL 33.18□□□□□ -1.94e-6■□□□□ 9.7
PRPF8Q6P2Q9 NUDT9-208ENST00000515371 576 ntTSL 32.86□□□□□ -1.954e-6■□□□□ 9.7
PRPF8Q6P2Q9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.094e-6■□□□□ 9.7
PRPF8Q6P2Q9 FRG1BP-201ENST00000278882 761 ntBASIC1.89□□□□□ -2.114e-6■□□□□ 9.7
PRPF8Q6P2Q9 RHEB-203ENST00000470370 501 ntTSL 50.49□□□□□ -2.334e-6■□□□□ 9.7
PRPF8Q6P2Q9 PSMA3-205ENST00000554207 570 ntTSL 20.33□□□□□ -2.364e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL2-204ENST00000481989 576 ntTSL 4-0.93□□□□□ -2.564e-6■□□□□ 9.7
PRPF8Q6P2Q9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.62□□□□□ -0.075e-12■□□□□ 9.7
PRPF8Q6P2Q9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.375e-12■□□□□ 9.7
PRPF8Q6P2Q9 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC10.9□□□□□ -0.675e-12■□□□□ 9.7
PRPF8Q6P2Q9 MCL1-203ENST00000464132 1099 ntTSL 27.63□□□□□ -1.195e-12■□□□□ 9.7
PRPF8Q6P2Q9 CLUH-212ENST00000575624 595 ntTSL 322.28■■□□□ 1.167e-8■□□□□ 9.7
PRPF8Q6P2Q9 ZNF33B-203ENST00000465206 707 ntTSL 311.75□□□□□ -0.532e-10■□□□□ 9.7
PRPF8Q6P2Q9 ZNF33B-205ENST00000486187 1941 ntTSL 29.32□□□□□ -0.922e-10■□□□□ 9.7
PRPF8Q6P2Q9 ZNF33B-204ENST00000476796 463 ntTSL 48.94□□□□□ -0.982e-10■□□□□ 9.7
PRPF8Q6P2Q9 ZNF33B-207ENST00000493285 319 ntTSL 58.53□□□□□ -1.042e-10■□□□□ 9.7
PRPF8Q6P2Q9 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.622e-10■□□□□ 9.7
PRPF8Q6P2Q9 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.732e-10■□□□□ 9.7
PRPF8Q6P2Q9 MDK-212ENST00000533952 477 ntAPPRIS ALT2 TSL 317.19■□□□□ 0.345e-7■□□□□ 9.7
PRPF8Q6P2Q9 CISD3-205ENST00000616128 773 ntTSL 212.55□□□□□ -0.42e-8■□□□□ 9.7
PRPF8Q6P2Q9 VIL1-205ENST00000454069 532 ntTSL 38.86□□□□□ -0.991e-15■□□□□ 9.7
PRPF8Q6P2Q9 SEPT5-215ENST00000490204 774 ntTSL 517.35■□□□□ 0.371e-15■□□□□ 9.7
PRPF8Q6P2Q9 POR-223ENST00000495770 559 ntTSL 212.58□□□□□ -0.48e-27■□□□□ 9.7
PRPF8Q6P2Q9 SETD5-216ENST00000466172 248 ntTSL 22.03□□□□□ -2.089e-15■□□□□ 9.7
PRPF8Q6P2Q9 ADAM9-205ENST00000481058 516 ntTSL 52.08□□□□□ -2.082e-7■□□□□ 9.7
PRPF8Q6P2Q9 CTDNEP1-203ENST00000570385 529 ntTSL 27.63□□□□□ -1.193e-9■□□□□ 9.7
PRPF8Q6P2Q9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.25■■□□□ 1.632e-7■□□□□ 9.7
PRPF8Q6P2Q9 PRELID2-209ENST00000515475 582 ntTSL 423.36■■□□□ 1.332e-7■□□□□ 9.7
PRPF8Q6P2Q9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.942e-7■□□□□ 9.7
PRPF8Q6P2Q9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.772e-7■□□□□ 9.7
PRPF8Q6P2Q9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.632e-7■□□□□ 9.7
PRPF8Q6P2Q9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.39■□□□□ 0.372e-7■□□□□ 9.7
PRPF8Q6P2Q9 TRADD-204ENST00000566104 669 ntTSL 217.18■□□□□ 0.342e-7■□□□□ 9.7
PRPF8Q6P2Q9 GANAB-203ENST00000524437 671 ntTSL 216.59■□□□□ 0.255e-10■□□□□ 9.7
PRPF8Q6P2Q9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.3■□□□□ 0.22e-7■□□□□ 9.7
PRPF8Q6P2Q9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.8■□□□□ 0.122e-7■□□□□ 9.7
PRPF8Q6P2Q9 TPTEP1-202ENST00000400593 1430 ntTSL 1 (best)13.24□□□□□ -0.292e-7■□□□□ 9.7
PRPF8Q6P2Q9 TPTEP1-204ENST00000426585 5725 ntTSL 1 (best)9.83□□□□□ -0.842e-7■□□□□ 9.7
PRPF8Q6P2Q9 KCTD3-203ENST00000452413 589 ntTSL 38.02□□□□□ -1.132e-7■□□□□ 9.7
PRPF8Q6P2Q9 TPTEP1-201ENST00000383140 971 ntTSL 1 (best)6.54□□□□□ -1.362e-7■□□□□ 9.7
PRPF8Q6P2Q9 TPTEP1-207ENST00000588424 1602 ntTSL 55.86□□□□□ -1.472e-7■□□□□ 9.7
PRPF8Q6P2Q9 TPTEP1-206ENST00000585784 473 ntTSL 24.68□□□□□ -1.662e-7■□□□□ 9.7
PRPF8Q6P2Q9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.55■□□□□ 0.083e-9■□□□□ 9.7
PRPF8Q6P2Q9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.053e-9■□□□□ 9.7
PRPF8Q6P2Q9 CHMP4A-207ENST00000533523 1266 ntTSL 1 (best)14.05□□□□□ -0.163e-9■□□□□ 9.7
PRPF8Q6P2Q9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.66□□□□□ -0.223e-9■□□□□ 9.7
PRPF8Q6P2Q9 CHMP4A-206ENST00000533011 733 ntTSL 58.98□□□□□ -0.973e-9■□□□□ 9.7
PRPF8Q6P2Q9 CHMP4A-209ENST00000542700 847 ntTSL 37.43□□□□□ -1.223e-9■□□□□ 9.7
PRPF8Q6P2Q9 COCH-208ENST00000555117 619 ntTSL 219.07■□□□□ 0.644e-7■□□□□ 9.7
PRPF8Q6P2Q9 COCH-206ENST00000553772 554 ntTSL 416.8■□□□□ 0.284e-7■□□□□ 9.7
PRPF8Q6P2Q9 TM7SF2-219ENST00000530892 691 ntTSL 219.4■□□□□ 0.71e-9■□□□□ 9.7
PRPF8Q6P2Q9 TM7SF2-215ENST00000529414 749 ntTSL 318.01■□□□□ 0.471e-9■□□□□ 9.7
PRPF8Q6P2Q9 TM7SF2-218ENST00000530750 365 ntTSL 516.93■□□□□ 0.31e-9■□□□□ 9.7
PRPF8Q6P2Q9 TM7SF2-226ENST00000534667 493 ntTSL 214.01□□□□□ -0.171e-9■□□□□ 9.7
PRPF8Q6P2Q9 PIGT-263ENST00000640549 1437 ntTSL 510.33□□□□□ -0.761e-6■□□□□ 9.7
PRPF8Q6P2Q9 PIGT-220ENST00000638537 1902 ntTSL 510.02□□□□□ -0.811e-6■□□□□ 9.7
PRPF8Q6P2Q9 PIGT-270ENST00000640940 1764 ntTSL 59.54□□□□□ -0.881e-6■□□□□ 9.7
PRPF8Q6P2Q9 PIGT-234ENST00000638962 2090 ntTSL 58.14□□□□□ -1.111e-6■□□□□ 9.7
PRPF8Q6P2Q9 PIGT-249ENST00000639872 1498 ntTSL 28.03□□□□□ -1.121e-6■□□□□ 9.7
PRPF8Q6P2Q9 PIGT-241ENST00000639250 3363 ntTSL 56.83□□□□□ -1.321e-6■□□□□ 9.7
PRPF8Q6P2Q9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.412e-6■□□□□ 9.7
PRPF8Q6P2Q9 PGGHG-205ENST00000474221 4418 ntTSL 212.4□□□□□ -0.426e-8■□□□□ 9.7
PRPF8Q6P2Q9 PGGHG-206ENST00000476372 2879 ntTSL 211.5□□□□□ -0.576e-8■□□□□ 9.7
PRPF8Q6P2Q9 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.776e-8■□□□□ 9.7
PRPF8Q6P2Q9 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC10.09□□□□□ -0.796e-8■□□□□ 9.7
PRPF8Q6P2Q9 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC10□□□□□ -0.816e-8■□□□□ 9.7
PRPF8Q6P2Q9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.438e-9■□□□□ 9.7
PRPF8Q6P2Q9 STC2-205ENST00000520648 616 ntTSL 27.52□□□□□ -1.28e-9■□□□□ 9.7
PRPF8Q6P2Q9 SDR39U1-221ENST00000556707 1196 ntTSL 220.87■□□□□ 0.933e-22■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-209ENST00000554947 1203 ntTSL 220.47■□□□□ 0.873e-22■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-216ENST00000556175 775 ntTSL 318.64■□□□□ 0.573e-22■□□□□ 9.6
PRPF8Q6P2Q9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.83■□□□□ 0.443e-22■□□□□ 9.6
PRPF8Q6P2Q9 DPH1-212ENST00000575162 657 ntTSL 217.83■□□□□ 0.443e-13■□□□□ 9.6
PRPF8Q6P2Q9 NDST1-204ENST00000519157 576 ntTSL 517.16■□□□□ 0.344e-10■□□□□ 9.6
Retrieved 100 of 73,762 protein–RNA pairs in 519.4 ms