RNA–Protein interactions for RNA: ENST00000557890.1

CYFIP1-201, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 2

Gene CYFIP1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-201ENST00000557890 AEBP2Q6ZN18 517 aaPredicted RBP21.99■■□□□ 1.11
CYFIP1-201ENST00000557890 CHIC1Q5VXU3 224 aa21.29■■□□□ 1
CYFIP1-201ENST00000557890 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
CYFIP1-201ENST00000557890 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
CYFIP1-201ENST00000557890 FOXD1Q16676 465 aa17.37■□□□□ 0.37
CYFIP1-201ENST00000557890 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
CYFIP1-201ENST00000557890 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
CYFIP1-201ENST00000557890 ADRA2BP18089 450 aa16.52■□□□□ 0.24
CYFIP1-201ENST00000557890 PIAS4Q8N2W9 510 aaPredicted RBP16.32■□□□□ 0.2
CYFIP1-201ENST00000557890 MSH5O43196 834 aa16.11■□□□□ 0.17
CYFIP1-201ENST00000557890 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
CYFIP1-201ENST00000557890 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
CYFIP1-201ENST00000557890 MAPK8IP2Q13387 824 aaPredicted RBP15.05■□□□□ -0
CYFIP1-201ENST00000557890 POTEDQ86YR6 584 aa15.02■□□□□ -0
CYFIP1-201ENST00000557890 DMRT2Q9Y5R5 561 aa14.9□□□□□ -0.02
CYFIP1-201ENST00000557890 CNKSR2Q8WXI2 1034 aa14.75□□□□□ -0.05
CYFIP1-201ENST00000557890 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
CYFIP1-201ENST00000557890 KCNA4P22459 653 aa14.52□□□□□ -0.09
CYFIP1-201ENST00000557890 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.09
CYFIP1-201ENST00000557890 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
CYFIP1-201ENST00000557890 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
CYFIP1-201ENST00000557890 DCAF8L1A6NGE4 600 aa14.22□□□□□ -0.13
CYFIP1-201ENST00000557890 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
CYFIP1-201ENST00000557890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.81□□□□□ -0.2
CYFIP1-201ENST00000557890 SLC4A1APQ9BWU0 796 aaKnown RBP13.79□□□□□ -0.2
CYFIP1-201ENST00000557890 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
CYFIP1-201ENST00000557890 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
CYFIP1-201ENST00000557890 C1QBPQ07021 282 aaKnown RBP13.62□□□□□ -0.23
CYFIP1-201ENST00000557890 U3KPZ7 1027 aaPredicted RBP13.57□□□□□ -0.24
CYFIP1-201ENST00000557890 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
CYFIP1-201ENST00000557890 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
CYFIP1-201ENST00000557890 ZBTB22O15209 634 aa13.36□□□□□ -0.27
CYFIP1-201ENST00000557890 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
CYFIP1-201ENST00000557890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.34□□□□□ -0.27
CYFIP1-201ENST00000557890 HNRNPUL2Q1KMD3 747 aaKnown RBP13.34□□□□□ -0.27
CYFIP1-201ENST00000557890 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
CYFIP1-201ENST00000557890 APLP2Q06481 763 aa13.25□□□□□ -0.29
CYFIP1-201ENST00000557890 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
CYFIP1-201ENST00000557890 CAPN15O75808 1086 aa13.2□□□□□ -0.3
CYFIP1-201ENST00000557890 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
CYFIP1-201ENST00000557890 CSRNP3Q8WYN3 585 aa13.12□□□□□ -0.31
CYFIP1-201ENST00000557890 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
CYFIP1-201ENST00000557890 TRHP20396 242 aaPredicted RBP13.08□□□□□ -0.32
CYFIP1-201ENST00000557890 DSG3P32926 999 aa13.05□□□□□ -0.32
CYFIP1-201ENST00000557890 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
CYFIP1-201ENST00000557890 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
CYFIP1-201ENST00000557890 ABCB7O75027 752 aa12.91□□□□□ -0.34
CYFIP1-201ENST00000557890 POLA2Q14181 598 aa12.84□□□□□ -0.35
CYFIP1-201ENST00000557890 ZBTB12Q9Y330 459 aaPredicted RBP12.62□□□□□ -0.39
CYFIP1-201ENST00000557890 FBLN2P98095 1184 aa12.47□□□□□ -0.41
CYFIP1-201ENST00000557890 RBM42Q9BTD8 480 aaKnown RBP12.44□□□□□ -0.42
CYFIP1-201ENST00000557890 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
CYFIP1-201ENST00000557890 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
CYFIP1-201ENST00000557890 SPDYE2BA6NHP3 402 aa12.26□□□□□ -0.45
CYFIP1-201ENST00000557890 SPDYE6P0CI01 402 aa12.26□□□□□ -0.45
CYFIP1-201ENST00000557890 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
CYFIP1-201ENST00000557890 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
CYFIP1-201ENST00000557890 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
CYFIP1-201ENST00000557890 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
CYFIP1-201ENST00000557890 REM2Q8IYK8 340 aaPredicted RBP12.12□□□□□ -0.47
CYFIP1-201ENST00000557890 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
CYFIP1-201ENST00000557890 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
CYFIP1-201ENST00000557890 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
CYFIP1-201ENST00000557890 PITPNM1O00562 1244 aa11.97□□□□□ -0.49
CYFIP1-201ENST00000557890 SPDYE1Q8NFV5 336 aaPredicted RBP11.94□□□□□ -0.5
CYFIP1-201ENST00000557890 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
CYFIP1-201ENST00000557890 FKBP8Q14318 412 aa11.86□□□□□ -0.51
CYFIP1-201ENST00000557890 POTEHQ6S545 545 aa11.85□□□□□ -0.51
CYFIP1-201ENST00000557890 PROM2Q8N271 834 aa11.85□□□□□ -0.51
CYFIP1-201ENST00000557890 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■■■■□ 24.7
CYFIP1-201ENST00000557890 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
CYFIP1-201ENST00000557890 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
CYFIP1-201ENST00000557890 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
CYFIP1-201ENST00000557890 PRKAR2AP13861 404 aaKnown RBP11.67□□□□□ -0.54
CYFIP1-201ENST00000557890 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
CYFIP1-201ENST00000557890 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
CYFIP1-201ENST00000557890 FBXO3Q9UK99 471 aa11.51□□□□□ -0.57
CYFIP1-201ENST00000557890 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
CYFIP1-201ENST00000557890 HAX1O00165 279 aa11.47□□□□□ -0.57
CYFIP1-201ENST00000557890 MIER1Q8N108 512 aa11.45□□□□□ -0.58
CYFIP1-201ENST00000557890 MNX1P50219 401 aaPredicted RBP11.43□□□□□ -0.58
CYFIP1-201ENST00000557890 C19orf67A6NJJ6 358 aa11.41□□□□□ -0.58
CYFIP1-201ENST00000557890 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
CYFIP1-201ENST00000557890 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
CYFIP1-201ENST00000557890 NPM1P06748 294 aaKnown RBP eCLIP11.38□□□□□ -0.59
CYFIP1-201ENST00000557890 EVX2Q03828 476 aa11.37□□□□□ -0.59
CYFIP1-201ENST00000557890 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
CYFIP1-201ENST00000557890 NISCHQ9Y2I1 1504 aa11.34□□□□□ -0.59
CYFIP1-201ENST00000557890 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
CYFIP1-201ENST00000557890 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
CYFIP1-201ENST00000557890 SP7Q8TDD2 431 aaPredicted RBP11.3□□□□□ -0.6
CYFIP1-201ENST00000557890 ZRANB1Q9UGI0 708 aa11.23□□□□□ -0.61
CYFIP1-201ENST00000557890 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
CYFIP1-201ENST00000557890 NUBP1P53384 320 aa11.19□□□□□ -0.62
CYFIP1-201ENST00000557890 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
CYFIP1-201ENST00000557890 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
CYFIP1-201ENST00000557890 RASEFQ8IZ41 740 aa11.18□□□□□ -0.62
CYFIP1-201ENST00000557890 ZNF579Q8NAF0 562 aaKnown RBP11.18□□□□□ -0.62
CYFIP1-201ENST00000557890 TSPYL2Q9H2G4 693 aaPredicted RBP11.16□□□□□ -0.62
CYFIP1-201ENST00000557890 GABBR2O75899 941 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms