RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 AEBP2Q6ZN18 517 aaPredicted RBP30■■■□□ 2.39
UBE2B-204ENST00000504431 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
UBE2B-204ENST00000504431 PHF23Q9BUL5 403 aaPredicted RBP26.04■■□□□ 1.76
UBE2B-204ENST00000504431 SENP3Q9H4L4 574 aaPredicted RBP25.61■■□□□ 1.69
UBE2B-204ENST00000504431 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
UBE2B-204ENST00000504431 FOXD1Q16676 465 aa23.59■■□□□ 1.37
UBE2B-204ENST00000504431 ADRA2BP18089 450 aa22.89■■□□□ 1.25
UBE2B-204ENST00000504431 PPP6R1Q9UPN7 881 aa22.85■■□□□ 1.25
UBE2B-204ENST00000504431 PIAS4Q8N2W9 510 aaPredicted RBP22.4■■□□□ 1.18
UBE2B-204ENST00000504431 MSH5O43196 834 aa21.81■■□□□ 1.08
UBE2B-204ENST00000504431 PPP4R3CPQ6ZMV5 832 aa21.4■■□□□ 1.02
UBE2B-204ENST00000504431 KCNA4P22459 653 aa21.17■□□□□ 0.98
UBE2B-204ENST00000504431 SCAF1Q9H7N4 1312 aaKnown RBP21.16■□□□□ 0.98
UBE2B-204ENST00000504431 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
UBE2B-204ENST00000504431 CNKSR2Q8WXI2 1034 aa20.8■□□□□ 0.92
UBE2B-204ENST00000504431 MAPK8IP2Q13387 824 aaPredicted RBP20.64■□□□□ 0.89
UBE2B-204ENST00000504431 NPM3O75607 178 aaKnown RBP20.59■□□□□ 0.89
UBE2B-204ENST00000504431 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
UBE2B-204ENST00000504431 RNF216Q9NWF9 866 aaPredicted RBP20.32■□□□□ 0.84
UBE2B-204ENST00000504431 SLC4A1APQ9BWU0 796 aaKnown RBP20.3■□□□□ 0.84
UBE2B-204ENST00000504431 HOXD11P31277 338 aaPredicted RBP20.13■□□□□ 0.81
UBE2B-204ENST00000504431 DNAJC5BQ9UF47 199 aa20.05■□□□□ 0.8
UBE2B-204ENST00000504431 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
UBE2B-204ENST00000504431 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
UBE2B-204ENST00000504431 DCAF8L1A6NGE4 600 aa19.54■□□□□ 0.72
UBE2B-204ENST00000504431 FOXD4L1Q9NU39 408 aa19.51■□□□□ 0.71
UBE2B-204ENST00000504431 ZBTB22O15209 634 aa19.42■□□□□ 0.7
UBE2B-204ENST00000504431 SLC4A2P04920 1241 aa19.32■□□□□ 0.68
UBE2B-204ENST00000504431 POTEDQ86YR6 584 aa19.22■□□□□ 0.67
UBE2B-204ENST00000504431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.22■□□□□ 0.67
UBE2B-204ENST00000504431 MYCNP04198 464 aaPredicted RBP19.13■□□□□ 0.65
UBE2B-204ENST00000504431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
UBE2B-204ENST00000504431 HNRNPUL2Q1KMD3 747 aaKnown RBP18.92■□□□□ 0.62
UBE2B-204ENST00000504431 ATXN8OSP0DMR3 200 aa18.86■□□□□ 0.61
UBE2B-204ENST00000504431 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
UBE2B-204ENST00000504431 SAMD1Q6SPF0 538 aaPredicted RBP18.81■□□□□ 0.6
UBE2B-204ENST00000504431 APLP2Q06481 763 aa18.71■□□□□ 0.59
UBE2B-204ENST00000504431 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
UBE2B-204ENST00000504431 C1QBPQ07021 282 aaKnown RBP18.49■□□□□ 0.55
UBE2B-204ENST00000504431 ATF5Q9Y2D1 282 aaPredicted RBP18.4■□□□□ 0.54
UBE2B-204ENST00000504431 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
UBE2B-204ENST00000504431 CAPN15O75808 1086 aa18.22■□□□□ 0.51
UBE2B-204ENST00000504431 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
UBE2B-204ENST00000504431 TRHP20396 242 aaPredicted RBP18.18■□□□□ 0.5
UBE2B-204ENST00000504431 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
UBE2B-204ENST00000504431 POLA2Q14181 598 aa17.93■□□□□ 0.46
UBE2B-204ENST00000504431 FBLN2P98095 1184 aa17.84■□□□□ 0.45
UBE2B-204ENST00000504431 ZBTB12Q9Y330 459 aaPredicted RBP17.84■□□□□ 0.45
UBE2B-204ENST00000504431 ABCB7O75027 752 aa17.83■□□□□ 0.44
UBE2B-204ENST00000504431 DSG3P32926 999 aa17.81■□□□□ 0.44
UBE2B-204ENST00000504431 FKBP8Q14318 412 aa17.76■□□□□ 0.43
UBE2B-204ENST00000504431 MKRN4PQ13434 485 aaPredicted RBP17.65■□□□□ 0.42
UBE2B-204ENST00000504431 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
UBE2B-204ENST00000504431 SPDYE4A6NLX3 237 aa17.5■□□□□ 0.39
UBE2B-204ENST00000504431 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
UBE2B-204ENST00000504431 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
UBE2B-204ENST00000504431 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
UBE2B-204ENST00000504431 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
UBE2B-204ENST00000504431 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
UBE2B-204ENST00000504431 PROM2Q8N271 834 aa17.22■□□□□ 0.35
UBE2B-204ENST00000504431 FBXO3Q9UK99 471 aa17.19■□□□□ 0.34
UBE2B-204ENST00000504431 SSUH2Q9Y2M2 353 aa17.14■□□□□ 0.33
UBE2B-204ENST00000504431 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
UBE2B-204ENST00000504431 PABPN1Q86U42 306 aaKnown RBP eCLIP16.99■□□□□ 0.31
UBE2B-204ENST00000504431 AKT1S1Q96B36 256 aa16.9■□□□□ 0.3
UBE2B-204ENST00000504431 STAG3Q9UJ98 1225 aa16.89■□□□□ 0.29
UBE2B-204ENST00000504431 VASPP50552 380 aaPredicted RBP16.84■□□□□ 0.29
UBE2B-204ENST00000504431 AMER1Q5JTC6 1135 aaPredicted RBP16.79■□□□□ 0.28
UBE2B-204ENST00000504431 SPDYE1Q8NFV5 336 aaPredicted RBP16.73■□□□□ 0.27
UBE2B-204ENST00000504431 REM2Q8IYK8 340 aaPredicted RBP16.67■□□□□ 0.26
UBE2B-204ENST00000504431 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
UBE2B-204ENST00000504431 PLCD3Q8N3E9 789 aa16.61■□□□□ 0.25
UBE2B-204ENST00000504431 RTN4Q9NQC3 1192 aaKnown RBP16.58■□□□□ 0.24
UBE2B-204ENST00000504431 CLEC11AQ9Y240 323 aa16.58■□□□□ 0.24
UBE2B-204ENST00000504431 IFNLR1Q8IU57 520 aaPredicted RBP16.56■□□□□ 0.24
UBE2B-204ENST00000504431 MIER1Q8N108 512 aa16.56■□□□□ 0.24
UBE2B-204ENST00000504431 KLHL34Q8N239 644 aa16.52■□□□□ 0.24
UBE2B-204ENST00000504431 ZBTB47Q9UFB7 747 aaPredicted RBP16.52■□□□□ 0.24
UBE2B-204ENST00000504431 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
UBE2B-204ENST00000504431 PITPNM1O00562 1244 aa16.46■□□□□ 0.23
UBE2B-204ENST00000504431 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
UBE2B-204ENST00000504431 CREBZFQ9NS37 354 aa16.28■□□□□ 0.2
UBE2B-204ENST00000504431 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
UBE2B-204ENST00000504431 CHRDL2Q6WN34 429 aa16.17■□□□□ 0.18
UBE2B-204ENST00000504431 MNX1P50219 401 aaPredicted RBP16.11■□□□□ 0.17
UBE2B-204ENST00000504431 FXR2P51116 673 aaKnown RBP eCLIP16.11■□□□□ 0.17
UBE2B-204ENST00000504431 PKD2Q13563 968 aa16.11■□□□□ 0.17
UBE2B-204ENST00000504431 GSE1Q14687 1217 aa16.1■□□□□ 0.17
UBE2B-204ENST00000504431 CIZ1Q9ULV3 898 aaPredicted RBP16.09■□□□□ 0.17
UBE2B-204ENST00000504431 PRKAR2AP13861 404 aaKnown RBP16.08■□□□□ 0.16
UBE2B-204ENST00000504431 NUBP1P53384 320 aa16.07■□□□□ 0.16
UBE2B-204ENST00000504431 CHADLQ6NUI6 762 aa16.07■□□□□ 0.16
UBE2B-204ENST00000504431 TRIM41Q8WV44 630 aa16.07■□□□□ 0.16
UBE2B-204ENST00000504431 ECM2O94769 699 aaPredicted RBP16.05■□□□□ 0.16
UBE2B-204ENST00000504431 FAM212AQ96EL1 285 aa16.05■□□□□ 0.16
UBE2B-204ENST00000504431 FARP1Q9Y4F1 1045 aaPredicted RBP16.02■□□□□ 0.16
UBE2B-204ENST00000504431 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
UBE2B-204ENST00000504431 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
UBE2B-204ENST00000504431 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
UBE2B-204ENST00000504431 RASEFQ8IZ41 740 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms