Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 MAPK10-354ENST00000641823 2732 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC245505.2-201ENST00000553572 3055 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AL049737.1-201ENST00000413920 1403 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 MAPK10-290ENST00000641237 2826 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 RPL5P35-201ENST00000398869 816 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 GSTA10P-201ENST00000412182 576 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 TRGV5P-201ENST00000419915 354 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 GAPDHP32-201ENST00000433816 998 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AL596276.1-201ENST00000434465 418 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC092393.1-201ENST00000439625 742 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 CUBNP2-201ENST00000443534 1139 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AL139135.2-201ENST00000445040 433 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 YWHABP1-201ENST00000445359 727 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AL118496.2-201ENST00000448300 230 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 RPL21P131-201ENST00000497298 483 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC008629.3-201ENST00000505786 586 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC010424.1-201ENST00000506336 297 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 HMGN1P17-201ENST00000513734 295 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC138938.1-201ENST00000515431 782 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 RNU6-759P-201ENST00000516740 103 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 OR56A7P-201ENST00000524865 941 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC135626.1-201ENST00000556983 435 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 UBE2CP1-201ENST00000557130 554 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 ACTR3BP3-201ENST00000565577 979 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AL606834.2-201ENST00000602954 668 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 RPL23AP90-201ENST00000603820 236 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AL021807.1-201ENST00000607175 565 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC072039.2-201ENST00000608883 439 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC027271.1-201ENST00000610270 610 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC007497.1-201ENST00000610421 561 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 PFN1P2-202ENST00000621347 397 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 MTND4P16-201ENST00000466108 1367 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 TCP1P3-201ENST00000414406 1498 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.03□□□□□ -1.28
ATG4DQ86TL0 MTND5P24-201ENST00000438892 1767 ntBASIC7.03□□□□□ -1.28
ATG4DQ86TL0 TTC3P1-201ENST00000399586 6081 ntBASIC7.02□□□□□ -1.28
ATG4DQ86TL0 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC7.02□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 401.4 ms