RNA–Protein interactions for RNA: ENST00000367520.3

COLGALT2-202, Transcript of collagen beta(1-O)galactosyltransferase 2, humanhuman

TSL 2 BASIC

Gene COLGALT2, Length 2,325 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT2-202ENST00000367520 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
COLGALT2-202ENST00000367520 SLC24A1O60721 1099 aa17.63■□□□□ 0.41
COLGALT2-202ENST00000367520 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
COLGALT2-202ENST00000367520 EHMT2Q96KQ7 1210 aa16.82■□□□□ 0.28
COLGALT2-202ENST00000367520 AEBP2Q6ZN18 517 aaPredicted RBP16.75■□□□□ 0.27
COLGALT2-202ENST00000367520 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
COLGALT2-202ENST00000367520 RTN4Q9NQC3 1192 aaKnown RBP16.12■□□□□ 0.17
COLGALT2-202ENST00000367520 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
COLGALT2-202ENST00000367520 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
COLGALT2-202ENST00000367520 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
COLGALT2-202ENST00000367520 DAXXQ9UER7 740 aaPredicted RBP15.74■□□□□ 0.11
COLGALT2-202ENST00000367520 KCNA4P22459 653 aa15.72■□□□□ 0.11
COLGALT2-202ENST00000367520 AMER1Q5JTC6 1135 aaPredicted RBP15.72■□□□□ 0.11
COLGALT2-202ENST00000367520 PRKCSHP14314 528 aaPredicted RBP15.35■□□□□ 0.05
COLGALT2-202ENST00000367520 SLC4A1APQ9BWU0 796 aaKnown RBP14.97□□□□□ -0.01
COLGALT2-202ENST00000367520 ARXQ96QS3 562 aa14.97□□□□□ -0.01
COLGALT2-202ENST00000367520 TIMELESSQ9UNS1 1208 aa14.96□□□□□ -0.01
COLGALT2-202ENST00000367520 TAOK2Q9UL54 1235 aa14.86□□□□□ -0.03
COLGALT2-202ENST00000367520 TULP1O00294 542 aaPredicted RBP14.73□□□□□ -0.05
COLGALT2-202ENST00000367520 BCANQ96GW7 911 aa14.66□□□□□ -0.06
COLGALT2-202ENST00000367520 CCDC180Q9P1Z9 1646 aa14.65□□□□□ -0.06
COLGALT2-202ENST00000367520 APLP2Q06481 763 aa14.64□□□□□ -0.07
COLGALT2-202ENST00000367520 TPRNQ4KMQ1 711 aa14.61□□□□□ -0.07
COLGALT2-202ENST00000367520 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
COLGALT2-202ENST00000367520 SHROOM4Q9ULL8 1493 aa14.55□□□□□ -0.08
COLGALT2-202ENST00000367520 ADRA2BP18089 450 aa14.53□□□□□ -0.08
COLGALT2-202ENST00000367520 PLCB2Q00722 1185 aa14.51□□□□□ -0.09
COLGALT2-202ENST00000367520 HOMEZQ8IX15 550 aa14.5□□□□□ -0.09
COLGALT2-202ENST00000367520 ZBTB22O15209 634 aa14.48□□□□□ -0.09
COLGALT2-202ENST00000367520 TTBK1Q5TCY1 1321 aaPredicted RBP14.45□□□□□ -0.1
COLGALT2-202ENST00000367520 PELP1Q8IZL8 1130 aaKnown RBP14.41□□□□□ -0.1
COLGALT2-202ENST00000367520 RANGAP1P46060 587 aaPredicted RBP14.4□□□□□ -0.11
COLGALT2-202ENST00000367520 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
COLGALT2-202ENST00000367520 HAP1P54257 671 aaPredicted RBP14.35□□□□□ -0.11
COLGALT2-202ENST00000367520 GTF3C3Q9Y5Q9 886 aa14.31□□□□□ -0.12
COLGALT2-202ENST00000367520 ERICH6Q7L0X2 663 aa14.3□□□□□ -0.12
COLGALT2-202ENST00000367520 ABCC9O60706 1549 aa14.25□□□□□ -0.13
COLGALT2-202ENST00000367520 KLHL34Q8N239 644 aa14.24□□□□□ -0.13
COLGALT2-202ENST00000367520 PODXL2Q9NZ53 605 aa14.21□□□□□ -0.13
COLGALT2-202ENST00000367520 MYT1Q01538 1121 aa14.16□□□□□ -0.14
COLGALT2-202ENST00000367520 FKBP8Q14318 412 aa14.06□□□□□ -0.16
COLGALT2-202ENST00000367520 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
COLGALT2-202ENST00000367520 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
COLGALT2-202ENST00000367520 TMEM132AQ24JP5 1023 aa13.99□□□□□ -0.17
COLGALT2-202ENST00000367520 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
COLGALT2-202ENST00000367520 KDM2AQ9Y2K7 1162 aa13.93□□□□□ -0.18
COLGALT2-202ENST00000367520 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
COLGALT2-202ENST00000367520 SCRIBQ14160 1630 aa13.89□□□□□ -0.19
COLGALT2-202ENST00000367520 NPM2Q86SE8 214 aaKnown RBP13.86□□□□□ -0.19
COLGALT2-202ENST00000367520 C14orf37Q86TY3 774 aa13.85□□□□□ -0.19
COLGALT2-202ENST00000367520 FBLN2P98095 1184 aa13.8□□□□□ -0.2
COLGALT2-202ENST00000367520 SENP3Q9H4L4 574 aaPredicted RBP13.73□□□□□ -0.21
COLGALT2-202ENST00000367520 EIF5BO60841 1220 aaKnown RBP13.73□□□□□ -0.21
COLGALT2-202ENST00000367520 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
COLGALT2-202ENST00000367520 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
COLGALT2-202ENST00000367520 TRIM26Q12899 539 aaPredicted RBP13.68□□□□□ -0.22
COLGALT2-202ENST00000367520 NACADO15069 1562 aa13.68□□□□□ -0.22
COLGALT2-202ENST00000367520 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
COLGALT2-202ENST00000367520 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
COLGALT2-202ENST00000367520 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
COLGALT2-202ENST00000367520 PABPN1Q86U42 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
COLGALT2-202ENST00000367520 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.23
COLGALT2-202ENST00000367520 UBTFP17480 764 aaKnown RBP13.55□□□□□ -0.24
COLGALT2-202ENST00000367520 HRCP23327 699 aa13.53□□□□□ -0.24
COLGALT2-202ENST00000367520 CECR2Q9BXF3 1484 aa13.51□□□□□ -0.25
COLGALT2-202ENST00000367520 UNC13AQ9UPW8 1703 aa13.44□□□□□ -0.26
COLGALT2-202ENST00000367520 RSF1Q96T23 1441 aaPredicted RBP13.42□□□□□ -0.26
COLGALT2-202ENST00000367520 LOC105371045A0A1W2PR82 267 aa13.4□□□□□ -0.26
COLGALT2-202ENST00000367520 MROH2BQ7Z745 1585 aa13.38□□□□□ -0.27
COLGALT2-202ENST00000367520 BICRAQ9NZM4 1560 aa13.32□□□□□ -0.28
COLGALT2-202ENST00000367520 PLEKHG5O94827 1062 aa13.3□□□□□ -0.28
COLGALT2-202ENST00000367520 PAXIP1Q6ZW49 1069 aaPredicted RBP13.29□□□□□ -0.28
COLGALT2-202ENST00000367520 WIZO95785 1651 aa13.28□□□□□ -0.28
COLGALT2-202ENST00000367520 NBR1Q14596 966 aa13.25□□□□□ -0.29
COLGALT2-202ENST00000367520 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
COLGALT2-202ENST00000367520 TSHZ2Q9NRE2 1034 aa13.24□□□□□ -0.29
COLGALT2-202ENST00000367520 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
COLGALT2-202ENST00000367520 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
COLGALT2-202ENST00000367520 SMARCA4P51532 1647 aa13.14□□□□□ -0.31
COLGALT2-202ENST00000367520 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
COLGALT2-202ENST00000367520 PKD2Q13563 968 aa13.12□□□□□ -0.31
COLGALT2-202ENST00000367520 BBXQ8WY36 941 aaPredicted RBP13.12□□□□□ -0.31
COLGALT2-202ENST00000367520 FAM9AQ8IZU1 332 aaPredicted RBP13.01□□□□□ -0.33
COLGALT2-202ENST00000367520 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
COLGALT2-202ENST00000367520 TOP2AP11388 1531 aaKnown RBP12.97□□□□□ -0.33
COLGALT2-202ENST00000367520 IGSF3O75054 1194 aa12.96□□□□□ -0.34
COLGALT2-202ENST00000367520 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
COLGALT2-202ENST00000367520 TRHP20396 242 aaPredicted RBP12.95□□□□□ -0.34
COLGALT2-202ENST00000367520 ATAD2BQ9ULI0 1458 aa12.94□□□□□ -0.34
COLGALT2-202ENST00000367520 DNAJC5Q9H3Z4 198 aa12.93□□□□□ -0.34
COLGALT2-202ENST00000367520 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
COLGALT2-202ENST00000367520 FOXD1Q16676 465 aa12.91□□□□□ -0.34
COLGALT2-202ENST00000367520 CCDC9Q9Y3X0 531 aaKnown RBP12.91□□□□□ -0.34
COLGALT2-202ENST00000367520 EIF4G1Q04637 1599 aaKnown RBP12.91□□□□□ -0.34
COLGALT2-202ENST00000367520 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
COLGALT2-202ENST00000367520 BAZ1BQ9UIG0 1483 aaKnown RBP12.88□□□□□ -0.35
COLGALT2-202ENST00000367520 ABCC8Q09428 1581 aa12.88□□□□□ -0.35
COLGALT2-202ENST00000367520 CHMP4AQ9BY43 222 aa12.87□□□□□ -0.35
COLGALT2-202ENST00000367520 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
COLGALT2-202ENST00000367520 ARID3AQ99856 593 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms