RNA–Protein interactions for RNA: ENST00000557130.1

UBE2CP1-201, Transcript of ubiquitin conjugating enzyme E2 C pseudogene 1, humanhuman

BASIC

Gene UBE2CP1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2CP1-201ENST00000557130 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
UBE2CP1-201ENST00000557130 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
UBE2CP1-201ENST00000557130 NISCHQ9Y2I1 1504 aa16.15■□□□□ 0.18
UBE2CP1-201ENST00000557130 PHF23Q9BUL5 403 aaPredicted RBP15.12■□□□□ 0.01
UBE2CP1-201ENST00000557130 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
UBE2CP1-201ENST00000557130 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
UBE2CP1-201ENST00000557130 CCDC180Q9P1Z9 1646 aa13.8□□□□□ -0.2
UBE2CP1-201ENST00000557130 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
UBE2CP1-201ENST00000557130 FOXD1Q16676 465 aa13.49□□□□□ -0.25
UBE2CP1-201ENST00000557130 SHROOM4Q9ULL8 1493 aa13.45□□□□□ -0.26
UBE2CP1-201ENST00000557130 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
UBE2CP1-201ENST00000557130 DCAF8L2P0C7V8 631 aa13.27□□□□□ -0.29
UBE2CP1-201ENST00000557130 PPP6R1Q9UPN7 881 aa13.26□□□□□ -0.29
UBE2CP1-201ENST00000557130 SUPT5HO00267 1087 aaKnown RBP13.25□□□□□ -0.29
UBE2CP1-201ENST00000557130 ADRA2BP18089 450 aa13.21□□□□□ -0.29
UBE2CP1-201ENST00000557130 MYO15BQ96JP2 1530 aa13.08□□□□□ -0.32
UBE2CP1-201ENST00000557130 NACADO15069 1562 aa12.83□□□□□ -0.36
UBE2CP1-201ENST00000557130 ABCC9O60706 1549 aa12.77□□□□□ -0.37
UBE2CP1-201ENST00000557130 RSF1Q96T23 1441 aaPredicted RBP12.73□□□□□ -0.37
UBE2CP1-201ENST00000557130 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
UBE2CP1-201ENST00000557130 PIAS4Q8N2W9 510 aaPredicted RBP12.69□□□□□ -0.38
UBE2CP1-201ENST00000557130 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
UBE2CP1-201ENST00000557130 CECR2Q9BXF3 1484 aa12.5□□□□□ -0.41
UBE2CP1-201ENST00000557130 LOC105371045A0A1W2PR82 267 aa12.48□□□□□ -0.41
UBE2CP1-201ENST00000557130 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
UBE2CP1-201ENST00000557130 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
UBE2CP1-201ENST00000557130 HRCP23327 699 aa12.42□□□□□ -0.42
UBE2CP1-201ENST00000557130 BAZ1AQ9NRL2 1556 aaPredicted RBP12.42□□□□□ -0.42
UBE2CP1-201ENST00000557130 KCNA4P22459 653 aa12.4□□□□□ -0.42
UBE2CP1-201ENST00000557130 PCGF6Q9BYE7 350 aa12.38□□□□□ -0.43
UBE2CP1-201ENST00000557130 WIZO95785 1651 aa12.35□□□□□ -0.43
UBE2CP1-201ENST00000557130 TRIM26Q12899 539 aaPredicted RBP12.33□□□□□ -0.44
UBE2CP1-201ENST00000557130 PPP4R3CPQ6ZMV5 832 aa12.33□□□□□ -0.44
UBE2CP1-201ENST00000557130 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
UBE2CP1-201ENST00000557130 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
UBE2CP1-201ENST00000557130 UNC13AQ9UPW8 1703 aa12.23□□□□□ -0.45
UBE2CP1-201ENST00000557130 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.46
UBE2CP1-201ENST00000557130 FAM9AQ8IZU1 332 aaPredicted RBP12.2□□□□□ -0.46
UBE2CP1-201ENST00000557130 MSH5O43196 834 aa12.18□□□□□ -0.46
UBE2CP1-201ENST00000557130 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
UBE2CP1-201ENST00000557130 BICRAQ9NZM4 1560 aa12.17□□□□□ -0.46
UBE2CP1-201ENST00000557130 SMARCA2P51531 1590 aa12.15□□□□□ -0.46
UBE2CP1-201ENST00000557130 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
UBE2CP1-201ENST00000557130 ZEB1P37275 1124 aaPredicted RBP12.13□□□□□ -0.47
UBE2CP1-201ENST00000557130 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
UBE2CP1-201ENST00000557130 EEA1Q15075 1411 aa12.08□□□□□ -0.48
UBE2CP1-201ENST00000557130 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.48
UBE2CP1-201ENST00000557130 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.49
UBE2CP1-201ENST00000557130 TNIKQ9UKE5 1360 aa11.99□□□□□ -0.49
UBE2CP1-201ENST00000557130 ABCC8Q09428 1581 aa11.99□□□□□ -0.49
UBE2CP1-201ENST00000557130 PPARGC1BQ86YN6 1023 aaKnown RBP11.97□□□□□ -0.49
UBE2CP1-201ENST00000557130 WRNQ14191 1432 aaPredicted RBP eCLIP11.96□□□□□ -0.49
UBE2CP1-201ENST00000557130 NCBP3Q53F19 620 aaKnown RBP11.95□□□□□ -0.5
UBE2CP1-201ENST00000557130 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
UBE2CP1-201ENST00000557130 SOGA1O94964 1423 aa11.94□□□□□ -0.5
UBE2CP1-201ENST00000557130 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
UBE2CP1-201ENST00000557130 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
UBE2CP1-201ENST00000557130 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
UBE2CP1-201ENST00000557130 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
UBE2CP1-201ENST00000557130 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
UBE2CP1-201ENST00000557130 CNKSR2Q8WXI2 1034 aa11.88□□□□□ -0.51
UBE2CP1-201ENST00000557130 CEP162Q5TB80 1403 aa11.87□□□□□ -0.51
UBE2CP1-201ENST00000557130 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
UBE2CP1-201ENST00000557130 GOLGA3Q08378 1498 aa11.87□□□□□ -0.51
UBE2CP1-201ENST00000557130 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
UBE2CP1-201ENST00000557130 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
UBE2CP1-201ENST00000557130 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
UBE2CP1-201ENST00000557130 SYNJ1O43426 1573 aa11.8□□□□□ -0.52
UBE2CP1-201ENST00000557130 KIF21BO75037 1637 aa11.79□□□□□ -0.52
UBE2CP1-201ENST00000557130 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
UBE2CP1-201ENST00000557130 TOP2BQ02880 1626 aa11.76□□□□□ -0.53
UBE2CP1-201ENST00000557130 CCER1Q8TC90 406 aaPredicted RBP11.73□□□□□ -0.53
UBE2CP1-201ENST00000557130 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.53
UBE2CP1-201ENST00000557130 CFTRP13569 1480 aa11.71□□□□□ -0.53
UBE2CP1-201ENST00000557130 CLIP1P30622 1438 aa11.7□□□□□ -0.54
UBE2CP1-201ENST00000557130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.68□□□□□ -0.54
UBE2CP1-201ENST00000557130 APLP2Q06481 763 aa11.67□□□□□ -0.54
UBE2CP1-201ENST00000557130 ERICH3Q5RHP9 1530 aa11.66□□□□□ -0.54
UBE2CP1-201ENST00000557130 PRXQ9BXM0 1461 aa11.66□□□□□ -0.54
UBE2CP1-201ENST00000557130 VPS8Q8N3P4 1428 aa11.66□□□□□ -0.54
UBE2CP1-201ENST00000557130 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
UBE2CP1-201ENST00000557130 KIF27Q86VH2 1401 aa11.64□□□□□ -0.55
UBE2CP1-201ENST00000557130 CUX1P39880 1505 aa11.62□□□□□ -0.55
UBE2CP1-201ENST00000557130 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
UBE2CP1-201ENST00000557130 CADPSQ9ULU8 1353 aa11.62□□□□□ -0.55
UBE2CP1-201ENST00000557130 RNF216Q9NWF9 866 aaPredicted RBP11.59□□□□□ -0.55
UBE2CP1-201ENST00000557130 TTBK1Q5TCY1 1321 aaPredicted RBP11.55□□□□□ -0.56
UBE2CP1-201ENST00000557130 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
UBE2CP1-201ENST00000557130 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
UBE2CP1-201ENST00000557130 IGF1RP08069 1367 aa11.54□□□□□ -0.56
UBE2CP1-201ENST00000557130 PRDM2Q13029 1718 aa11.53□□□□□ -0.56
UBE2CP1-201ENST00000557130 HOXD11P31277 338 aaPredicted RBP11.52□□□□□ -0.57
UBE2CP1-201ENST00000557130 ZBTB22O15209 634 aa11.49□□□□□ -0.57
UBE2CP1-201ENST00000557130 CLSPNQ9HAW4 1339 aa11.49□□□□□ -0.57
UBE2CP1-201ENST00000557130 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
UBE2CP1-201ENST00000557130 ARAP1Q96P48 1450 aa11.48□□□□□ -0.57
UBE2CP1-201ENST00000557130 CC2D2AQ9P2K1 1620 aa11.47□□□□□ -0.57
UBE2CP1-201ENST00000557130 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
UBE2CP1-201ENST00000557130 ZNF316A6NFI3 1004 aaPredicted RBP11.47□□□□□ -0.57
UBE2CP1-201ENST00000557130 CUX2O14529 1486 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms