RNA–Protein interactions for RNA: ENST00000407050.8

PPFIA2-202, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-202ENST00000407050 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
PPFIA2-202ENST00000407050 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
PPFIA2-202ENST00000407050 SHROOM4Q9ULL8 1493 aa13.89□□□□□ -0.19
PPFIA2-202ENST00000407050 CCDC180Q9P1Z9 1646 aa13.71□□□□□ -0.21
PPFIA2-202ENST00000407050 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.23
PPFIA2-202ENST00000407050 ZCCHC6Q5VYS8 1495 aaKnown RBP13.49□□□□□ -0.25
PPFIA2-202ENST00000407050 ABCC9O60706 1549 aa13.33□□□□□ -0.28
PPFIA2-202ENST00000407050 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.32
PPFIA2-202ENST00000407050 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
PPFIA2-202ENST00000407050 NACADO15069 1562 aa12.89□□□□□ -0.35
PPFIA2-202ENST00000407050 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
PPFIA2-202ENST00000407050 MYO15BQ96JP2 1530 aa12.81□□□□□ -0.36
PPFIA2-202ENST00000407050 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
PPFIA2-202ENST00000407050 CHIC1Q5VXU3 224 aa12.78□□□□□ -0.36
PPFIA2-202ENST00000407050 TRIM41Q8WV44 630 aa12.66□□□□□ -0.38
PPFIA2-202ENST00000407050 RSF1Q96T23 1441 aaPredicted RBP12.65□□□□□ -0.38
PPFIA2-202ENST00000407050 FAM9AQ8IZU1 332 aaPredicted RBP12.63□□□□□ -0.39
PPFIA2-202ENST00000407050 EHMT2Q96KQ7 1210 aa12.63□□□□□ -0.39
PPFIA2-202ENST00000407050 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
PPFIA2-202ENST00000407050 MROH2BQ7Z745 1585 aa12.49□□□□□ -0.41
PPFIA2-202ENST00000407050 LOC105371045A0A1W2PR82 267 aa12.46□□□□□ -0.41
PPFIA2-202ENST00000407050 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
PPFIA2-202ENST00000407050 WIZO95785 1651 aa12.37□□□□□ -0.43
PPFIA2-202ENST00000407050 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
PPFIA2-202ENST00000407050 PCGF6Q9BYE7 350 aa12.29□□□□□ -0.44
PPFIA2-202ENST00000407050 UNC13AQ9UPW8 1703 aa12.25□□□□□ -0.45
PPFIA2-202ENST00000407050 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
PPFIA2-202ENST00000407050 BAZ1BQ9UIG0 1483 aaKnown RBP12.22□□□□□ -0.45
PPFIA2-202ENST00000407050 UBTFP17480 764 aaKnown RBP12.22□□□□□ -0.45
PPFIA2-202ENST00000407050 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.46
PPFIA2-202ENST00000407050 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
PPFIA2-202ENST00000407050 RANGAP1P46060 587 aaPredicted RBP12.15□□□□□ -0.46
PPFIA2-202ENST00000407050 TTBK1Q5TCY1 1321 aaPredicted RBP12.13□□□□□ -0.47
PPFIA2-202ENST00000407050 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
PPFIA2-202ENST00000407050 ATAD2BQ9ULI0 1458 aa12.13□□□□□ -0.47
PPFIA2-202ENST00000407050 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
PPFIA2-202ENST00000407050 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
PPFIA2-202ENST00000407050 CSRNP3Q8WYN3 585 aa12.05□□□□□ -0.48
PPFIA2-202ENST00000407050 TRIM26Q12899 539 aaPredicted RBP12.05□□□□□ -0.48
PPFIA2-202ENST00000407050 WRNQ14191 1432 aaPredicted RBP eCLIP12.04□□□□□ -0.48
PPFIA2-202ENST00000407050 APLP2Q06481 763 aa12.04□□□□□ -0.48
PPFIA2-202ENST00000407050 EIF4G1Q04637 1599 aaKnown RBP12□□□□□ -0.49
PPFIA2-202ENST00000407050 SOGA1O94964 1423 aa11.95□□□□□ -0.5
PPFIA2-202ENST00000407050 NCAPD3P42695 1498 aa11.92□□□□□ -0.5
PPFIA2-202ENST00000407050 EEA1Q15075 1411 aa11.92□□□□□ -0.5
PPFIA2-202ENST00000407050 PEG3Q9GZU2 1588 aa11.92□□□□□ -0.5
PPFIA2-202ENST00000407050 HRCP23327 699 aa11.89□□□□□ -0.51
PPFIA2-202ENST00000407050 HMGXB3Q12766 1538 aa11.85□□□□□ -0.51
PPFIA2-202ENST00000407050 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
PPFIA2-202ENST00000407050 ATP1B4Q9UN42 357 aaPredicted RBP11.83□□□□□ -0.52
PPFIA2-202ENST00000407050 RUSC2Q8N2Y8 1516 aa11.82□□□□□ -0.52
PPFIA2-202ENST00000407050 CEP162Q5TB80 1403 aa11.82□□□□□ -0.52
PPFIA2-202ENST00000407050 CADPSQ9ULU8 1353 aa11.81□□□□□ -0.52
PPFIA2-202ENST00000407050 TNIKQ9UKE5 1360 aa11.8□□□□□ -0.52
PPFIA2-202ENST00000407050 CC2D2AQ9P2K1 1620 aa11.8□□□□□ -0.52
PPFIA2-202ENST00000407050 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
PPFIA2-202ENST00000407050 CCER1Q8TC90 406 aaPredicted RBP11.79□□□□□ -0.52
PPFIA2-202ENST00000407050 KIF27Q86VH2 1401 aa11.77□□□□□ -0.53
PPFIA2-202ENST00000407050 SYNJ1O43426 1573 aa11.77□□□□□ -0.53
PPFIA2-202ENST00000407050 ZEB1P37275 1124 aaPredicted RBP11.77□□□□□ -0.53
PPFIA2-202ENST00000407050 CLIP1P30622 1438 aa11.75□□□□□ -0.53
PPFIA2-202ENST00000407050 CFTRP13569 1480 aa11.73□□□□□ -0.53
PPFIA2-202ENST00000407050 CUX2O14529 1486 aa11.71□□□□□ -0.53
PPFIA2-202ENST00000407050 HNRNPUL2Q1KMD3 747 aaKnown RBP11.71□□□□□ -0.54
PPFIA2-202ENST00000407050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.68□□□□□ -0.54
PPFIA2-202ENST00000407050 FANCD2Q9BXW9 1451 aa11.68□□□□□ -0.54
PPFIA2-202ENST00000407050 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
PPFIA2-202ENST00000407050 RAPGEF2Q9Y4G8 1499 aa11.66□□□□□ -0.54
PPFIA2-202ENST00000407050 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
PPFIA2-202ENST00000407050 CUX1P39880 1505 aa11.64□□□□□ -0.55
PPFIA2-202ENST00000407050 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
PPFIA2-202ENST00000407050 NESP48681 1621 aa11.63□□□□□ -0.55
PPFIA2-202ENST00000407050 ITGAEP38570 1179 aa11.63□□□□□ -0.55
PPFIA2-202ENST00000407050 CARMIL1Q5VZK9 1371 aa11.61□□□□□ -0.55
PPFIA2-202ENST00000407050 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
PPFIA2-202ENST00000407050 DNAJC5BQ9UF47 199 aa11.6□□□□□ -0.55
PPFIA2-202ENST00000407050 KIF21BO75037 1637 aa11.57□□□□□ -0.56
PPFIA2-202ENST00000407050 VPS8Q8N3P4 1428 aa11.56□□□□□ -0.56
PPFIA2-202ENST00000407050 FBLN2P98095 1184 aa11.55□□□□□ -0.56
PPFIA2-202ENST00000407050 TDRD9Q8NDG6 1382 aaKnown RBP11.55□□□□□ -0.56
PPFIA2-202ENST00000407050 RAD54L2Q9Y4B4 1467 aa11.55□□□□□ -0.56
PPFIA2-202ENST00000407050 BIVM-ERCC5R4GMW8 1640 aa11.54□□□□□ -0.56
PPFIA2-202ENST00000407050 ERCC6Q03468 1493 aa11.54□□□□□ -0.56
PPFIA2-202ENST00000407050 IGF1RP08069 1367 aa11.52□□□□□ -0.56
PPFIA2-202ENST00000407050 FAM50AQ14320 339 aaKnown RBP11.51□□□□□ -0.57
PPFIA2-202ENST00000407050 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
PPFIA2-202ENST00000407050 PRXQ9BXM0 1461 aa11.5□□□□□ -0.57
PPFIA2-202ENST00000407050 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
PPFIA2-202ENST00000407050 LAMC3Q9Y6N6 1575 aa11.47□□□□□ -0.57
PPFIA2-202ENST00000407050 DNMBPQ6XZF7 1577 aa11.47□□□□□ -0.57
PPFIA2-202ENST00000407050 POLA1P09884 1462 aaPredicted RBP11.47□□□□□ -0.57
PPFIA2-202ENST00000407050 ARID3CA6NKF2 412 aa11.46□□□□□ -0.57
PPFIA2-202ENST00000407050 KANK4Q5T7N3 995 aaPredicted RBP11.42□□□□□ -0.58
PPFIA2-202ENST00000407050 CHMP7Q8WUX9 453 aaPredicted RBP11.42□□□□□ -0.58
PPFIA2-202ENST00000407050 PRDM2Q13029 1718 aa11.41□□□□□ -0.58
PPFIA2-202ENST00000407050 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
PPFIA2-202ENST00000407050 FHAD1B1AJZ9 1412 aa11.4□□□□□ -0.58
PPFIA2-202ENST00000407050 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.58
PPFIA2-202ENST00000407050 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
PPFIA2-202ENST00000407050 FHOD3Q2V2M9 1422 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms