RNA–Protein interactions for RNA: ENST00000399586.2

TTC3P1-201, Transcript of tetratricopeptide repeat domain 3 pseudogene 1, humanhuman

BASIC

Gene TTC3P1, Length 6,081 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P1-201ENST00000399586 DCAF8L2P0C7V8 631 aa14.15□□□□□ -0.14
TTC3P1-201ENST00000399586 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
TTC3P1-201ENST00000399586 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
TTC3P1-201ENST00000399586 SUPT5HO00267 1087 aaKnown RBP13.14□□□□□ -0.31
TTC3P1-201ENST00000399586 TTBK1Q5TCY1 1321 aaPredicted RBP12.86□□□□□ -0.35
TTC3P1-201ENST00000399586 ERICH6Q7L0X2 663 aa12.85□□□□□ -0.35
TTC3P1-201ENST00000399586 APLP2Q06481 763 aa12.84□□□□□ -0.35
TTC3P1-201ENST00000399586 SHROOM4Q9ULL8 1493 aa12.76□□□□□ -0.37
TTC3P1-201ENST00000399586 FAM9AQ8IZU1 332 aaPredicted RBP12.71□□□□□ -0.37
TTC3P1-201ENST00000399586 RANGAP1P46060 587 aaPredicted RBP12.68□□□□□ -0.38
TTC3P1-201ENST00000399586 ATP1B4Q9UN42 357 aaPredicted RBP12.6□□□□□ -0.39
TTC3P1-201ENST00000399586 CCER1Q8TC90 406 aaPredicted RBP12.59□□□□□ -0.39
TTC3P1-201ENST00000399586 MYT1Q01538 1121 aa12.52□□□□□ -0.4
TTC3P1-201ENST00000399586 PCGF6Q9BYE7 350 aa12.5□□□□□ -0.41
TTC3P1-201ENST00000399586 YTHDC1Q96MU7 727 aaKnown RBP12.36□□□□□ -0.43
TTC3P1-201ENST00000399586 CENPBP07199 599 aaPredicted RBP12.34□□□□□ -0.43
TTC3P1-201ENST00000399586 NEFLP07196 543 aa12.32□□□□□ -0.44
TTC3P1-201ENST00000399586 MYT1LQ9UL68 1186 aa12.29□□□□□ -0.44
TTC3P1-201ENST00000399586 CHIC1Q5VXU3 224 aa12.25□□□□□ -0.45
TTC3P1-201ENST00000399586 POLR3GLQ9BT43 218 aa12.23□□□□□ -0.45
TTC3P1-201ENST00000399586 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
TTC3P1-201ENST00000399586 CNGB1Q14028 1251 aaPredicted RBP12.2□□□□□ -0.46
TTC3P1-201ENST00000399586 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
TTC3P1-201ENST00000399586 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
TTC3P1-201ENST00000399586 PPARGC1BQ86YN6 1023 aaKnown RBP12.07□□□□□ -0.48
TTC3P1-201ENST00000399586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.05□□□□□ -0.48
TTC3P1-201ENST00000399586 HNRNPUL2Q1KMD3 747 aaKnown RBP12.05□□□□□ -0.48
TTC3P1-201ENST00000399586 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
TTC3P1-201ENST00000399586 ITGAEP38570 1179 aa12□□□□□ -0.49
TTC3P1-201ENST00000399586 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
TTC3P1-201ENST00000399586 CLSPNQ9HAW4 1339 aa11.93□□□□□ -0.5
TTC3P1-201ENST00000399586 NISCHQ9Y2I1 1504 aa11.92□□□□□ -0.5
TTC3P1-201ENST00000399586 ZNF316A6NFI3 1004 aaPredicted RBP11.92□□□□□ -0.5
TTC3P1-201ENST00000399586 BCL11AQ9H165 835 aa11.86□□□□□ -0.51
TTC3P1-201ENST00000399586 SLC24A1O60721 1099 aa11.82□□□□□ -0.52
TTC3P1-201ENST00000399586 RTL5Q5HYW3 569 aaPredicted RBP11.78□□□□□ -0.52
TTC3P1-201ENST00000399586 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
TTC3P1-201ENST00000399586 BCANQ96GW7 911 aa11.61□□□□□ -0.55
TTC3P1-201ENST00000399586 TRIM52Q96A61 297 aa11.56□□□□□ -0.56
TTC3P1-201ENST00000399586 ZNF326Q5BKZ1 582 aaKnown RBP11.56□□□□□ -0.56
TTC3P1-201ENST00000399586 CANXP27824 592 aaKnown RBP11.53□□□□□ -0.56
TTC3P1-201ENST00000399586 FAM50AQ14320 339 aaKnown RBP11.52□□□□□ -0.57
TTC3P1-201ENST00000399586 HRCP23327 699 aa11.5□□□□□ -0.57
TTC3P1-201ENST00000399586 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
TTC3P1-201ENST00000399586 NEUROD1Q13562 356 aa11.5□□□□□ -0.57
TTC3P1-201ENST00000399586 TRIM26Q12899 539 aaPredicted RBP11.49□□□□□ -0.57
TTC3P1-201ENST00000399586 NEFMP07197 916 aa11.41□□□□□ -0.58
TTC3P1-201ENST00000399586 FBLN2P98095 1184 aa11.38□□□□□ -0.59
TTC3P1-201ENST00000399586 NPM2Q86SE8 214 aaKnown RBP11.37□□□□□ -0.59
TTC3P1-201ENST00000399586 LOC105371045A0A1W2PR82 267 aa11.37□□□□□ -0.59
TTC3P1-201ENST00000399586 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
TTC3P1-201ENST00000399586 DIEXFQ68CQ4 756 aaKnown RBP11.35□□□□□ -0.59
TTC3P1-201ENST00000399586 EIF5BO60841 1220 aaKnown RBP11.34□□□□□ -0.59
TTC3P1-201ENST00000399586 A0A0G2JS52 829 aa11.32□□□□□ -0.6
TTC3P1-201ENST00000399586 ARID3CA6NKF2 412 aa11.31□□□□□ -0.6
TTC3P1-201ENST00000399586 ANP32CO43423 234 aa11.3□□□□□ -0.6
TTC3P1-201ENST00000399586 HSP90AA1P07900 732 aaKnown RBP11.29□□□□□ -0.6
TTC3P1-201ENST00000399586 SCAF1Q9H7N4 1312 aaKnown RBP11.28□□□□□ -0.6
TTC3P1-201ENST00000399586 ANP32BQ92688 251 aaKnown RBP11.27□□□□□ -0.61
TTC3P1-201ENST00000399586 ARXQ96QS3 562 aa11.25□□□□□ -0.61
TTC3P1-201ENST00000399586 ESF1Q9H501 851 aaKnown RBP11.25□□□□□ -0.61
TTC3P1-201ENST00000399586 PLEKHG5O94827 1062 aa11.24□□□□□ -0.61
TTC3P1-201ENST00000399586 CDK11BP21127 795 aaKnown RBP11.22□□□□□ -0.61
TTC3P1-201ENST00000399586 TULP1O00294 542 aaPredicted RBP11.22□□□□□ -0.61
TTC3P1-201ENST00000399586 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
TTC3P1-201ENST00000399586 CHGAP10645 457 aaKnown RBP11.22□□□□□ -0.61
TTC3P1-201ENST00000399586 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
TTC3P1-201ENST00000399586 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
TTC3P1-201ENST00000399586 ZNF777Q9ULD5 760 aaPredicted RBP11.19□□□□□ -0.62
TTC3P1-201ENST00000399586 ZBTB7CA1YPR0 619 aa11.16□□□□□ -0.62
TTC3P1-201ENST00000399586 SALL2Q9Y467 1007 aaPredicted RBP11.15□□□□□ -0.62
TTC3P1-201ENST00000399586 SENP3Q9H4L4 574 aaPredicted RBP11.13□□□□□ -0.63
TTC3P1-201ENST00000399586 P3H3Q8IVL6 736 aa11.13□□□□□ -0.63
TTC3P1-201ENST00000399586 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
TTC3P1-201ENST00000399586 UPF2Q9HAU5 1272 aaKnown RBP11.09□□□□□ -0.63
TTC3P1-201ENST00000399586 NBR1Q14596 966 aa11.05□□□□□ -0.64
TTC3P1-201ENST00000399586 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
TTC3P1-201ENST00000399586 TPRNQ4KMQ1 711 aa11.04□□□□□ -0.64
TTC3P1-201ENST00000399586 C14orf37Q86TY3 774 aa11.04□□□□□ -0.64
TTC3P1-201ENST00000399586 TAOK2Q9UL54 1235 aa11.01□□□□□ -0.65
TTC3P1-201ENST00000399586 GLIPR1L2Q4G1C9 344 aa11.01□□□□□ -0.65
TTC3P1-201ENST00000399586 FAM9BQ8IZU0 186 aa11.01□□□□□ -0.65
TTC3P1-201ENST00000399586 FKBP8Q14318 412 aa10.98□□□□□ -0.65
TTC3P1-201ENST00000399586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.97□□□□□ -0.65
TTC3P1-201ENST00000399586 HAP1P54257 671 aaPredicted RBP10.95□□□□□ -0.66
TTC3P1-201ENST00000399586 HNRNPUQ00839 825 aaKnown RBP eCLIP10.92□□□□□ -0.66
TTC3P1-201ENST00000399586 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.92□□□□□ -0.66
TTC3P1-201ENST00000399586 MYH16Q9H6N6 1097 aa10.92□□□□□ -0.66
TTC3P1-201ENST00000399586 NPM1P06748 294 aaKnown RBP eCLIP10.92□□□□□ -0.66
TTC3P1-201ENST00000399586 NPHP1O15259 732 aa10.9□□□□□ -0.66
TTC3P1-201ENST00000399586 WDR43Q15061 677 aaKnown RBP eCLIP10.9□□□□□ -0.66
TTC3P1-201ENST00000399586 NCLP19338 710 aaKnown RBP10.89□□□□□ -0.67
TTC3P1-201ENST00000399586 CCDC136Q96JN2 1154 aa10.88□□□□□ -0.67
TTC3P1-201ENST00000399586 KDM2AQ9Y2K7 1162 aa10.88□□□□□ -0.67
TTC3P1-201ENST00000399586 CLSTN1O94985 981 aa10.88□□□□□ -0.67
TTC3P1-201ENST00000399586 ZRSR1Q15695 479 aaKnown RBP10.86□□□□□ -0.67
TTC3P1-201ENST00000399586 IRX6P78412 446 aaPredicted RBP10.86□□□□□ -0.67
TTC3P1-201ENST00000399586 TMC1Q8TDI8 760 aa10.85□□□□□ -0.67
TTC3P1-201ENST00000399586 SENP3-EIF4A1A0A087X0R7 540 aa10.83□□□□□ -0.68
TTC3P1-201ENST00000399586 PTMAP06454 111 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms