RNA–Protein interactions for RNA: ENST00000519319.1

PCAT1-201, prostate cancer associated transcript 1, humanhuman

TSL 2 BASIC

Gene PCAT1, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-201ENST00000519319 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
PCAT1-201ENST00000519319 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
PCAT1-201ENST00000519319 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
PCAT1-201ENST00000519319 SENP3Q9H4L4 574 aaPredicted RBP20.13■□□□□ 0.81
PCAT1-201ENST00000519319 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
PCAT1-201ENST00000519319 FOXD1Q16676 465 aa18.62■□□□□ 0.57
PCAT1-201ENST00000519319 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
PCAT1-201ENST00000519319 ADRA2BP18089 450 aa18.05■□□□□ 0.48
PCAT1-201ENST00000519319 PIAS4Q8N2W9 510 aaPredicted RBP17.6■□□□□ 0.41
PCAT1-201ENST00000519319 MSH5O43196 834 aa17.14■□□□□ 0.33
PCAT1-201ENST00000519319 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
PCAT1-201ENST00000519319 KCNA4P22459 653 aa16.65■□□□□ 0.26
PCAT1-201ENST00000519319 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
PCAT1-201ENST00000519319 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
PCAT1-201ENST00000519319 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
PCAT1-201ENST00000519319 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
PCAT1-201ENST00000519319 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
PCAT1-201ENST00000519319 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
PCAT1-201ENST00000519319 RNF216Q9NWF9 866 aaPredicted RBP15.97■□□□□ 0.15
PCAT1-201ENST00000519319 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
PCAT1-201ENST00000519319 HOXD11P31277 338 aaPredicted RBP15.86■□□□□ 0.13
PCAT1-201ENST00000519319 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
PCAT1-201ENST00000519319 EHMT2Q96KQ7 1210 aa15.62■□□□□ 0.09
PCAT1-201ENST00000519319 CSRNP3Q8WYN3 585 aa15.42■□□□□ 0.06
PCAT1-201ENST00000519319 DCAF8L1A6NGE4 600 aa15.32■□□□□ 0.04
PCAT1-201ENST00000519319 ZBTB22O15209 634 aa15.31■□□□□ 0.04
PCAT1-201ENST00000519319 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
PCAT1-201ENST00000519319 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
PCAT1-201ENST00000519319 POTEDQ86YR6 584 aa15.21■□□□□ 0.03
PCAT1-201ENST00000519319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.08■□□□□ 0
PCAT1-201ENST00000519319 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
PCAT1-201ENST00000519319 U3KPZ7 1027 aaPredicted RBP14.86□□□□□ -0.03
PCAT1-201ENST00000519319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
PCAT1-201ENST00000519319 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
PCAT1-201ENST00000519319 ATXN8OSP0DMR3 200 aa14.79□□□□□ -0.04
PCAT1-201ENST00000519319 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
PCAT1-201ENST00000519319 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
PCAT1-201ENST00000519319 APLP2Q06481 763 aa14.6□□□□□ -0.07
PCAT1-201ENST00000519319 C1QBPQ07021 282 aaKnown RBP14.55□□□□□ -0.08
PCAT1-201ENST00000519319 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.09
PCAT1-201ENST00000519319 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
PCAT1-201ENST00000519319 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
PCAT1-201ENST00000519319 CAPN15O75808 1086 aa14.29□□□□□ -0.12
PCAT1-201ENST00000519319 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
PCAT1-201ENST00000519319 CACNB1Q02641 598 aaPredicted RBP14.13□□□□□ -0.15
PCAT1-201ENST00000519319 POLA2Q14181 598 aa14.11□□□□□ -0.15
PCAT1-201ENST00000519319 DSG3P32926 999 aa14.04□□□□□ -0.16
PCAT1-201ENST00000519319 ABCB7O75027 752 aa14.01□□□□□ -0.17
PCAT1-201ENST00000519319 FBLN2P98095 1184 aa13.94□□□□□ -0.18
PCAT1-201ENST00000519319 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
PCAT1-201ENST00000519319 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
PCAT1-201ENST00000519319 FKBP8Q14318 412 aa13.9□□□□□ -0.18
PCAT1-201ENST00000519319 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
PCAT1-201ENST00000519319 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
PCAT1-201ENST00000519319 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
PCAT1-201ENST00000519319 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
PCAT1-201ENST00000519319 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
PCAT1-201ENST00000519319 PROM2Q8N271 834 aa13.56□□□□□ -0.24
PCAT1-201ENST00000519319 ZNF692Q9BU19 519 aaPredicted RBP13.53□□□□□ -0.24
PCAT1-201ENST00000519319 SSUH2Q9Y2M2 353 aa13.48□□□□□ -0.25
PCAT1-201ENST00000519319 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
PCAT1-201ENST00000519319 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
PCAT1-201ENST00000519319 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
PCAT1-201ENST00000519319 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
PCAT1-201ENST00000519319 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
PCAT1-201ENST00000519319 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
PCAT1-201ENST00000519319 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
PCAT1-201ENST00000519319 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
PCAT1-201ENST00000519319 AMER1Q5JTC6 1135 aaPredicted RBP13.06□□□□□ -0.32
PCAT1-201ENST00000519319 IFNLR1Q8IU57 520 aaPredicted RBP13.01□□□□□ -0.33
PCAT1-201ENST00000519319 MIER1Q8N108 512 aa12.99□□□□□ -0.33
PCAT1-201ENST00000519319 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
PCAT1-201ENST00000519319 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
PCAT1-201ENST00000519319 RTN4Q9NQC3 1192 aaKnown RBP12.98□□□□□ -0.33
PCAT1-201ENST00000519319 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
PCAT1-201ENST00000519319 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
PCAT1-201ENST00000519319 PLEKHG5O94827 1062 aa12.93□□□□□ -0.34
PCAT1-201ENST00000519319 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
PCAT1-201ENST00000519319 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
PCAT1-201ENST00000519319 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
PCAT1-201ENST00000519319 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
PCAT1-201ENST00000519319 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
PCAT1-201ENST00000519319 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
PCAT1-201ENST00000519319 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCAT1-201ENST00000519319 PKD2Q13563 968 aa12.67□□□□□ -0.38
PCAT1-201ENST00000519319 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
PCAT1-201ENST00000519319 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
PCAT1-201ENST00000519319 NUBP1P53384 320 aa12.64□□□□□ -0.39
PCAT1-201ENST00000519319 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
PCAT1-201ENST00000519319 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
PCAT1-201ENST00000519319 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
PCAT1-201ENST00000519319 GSE1Q14687 1217 aa12.58□□□□□ -0.4
PCAT1-201ENST00000519319 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
PCAT1-201ENST00000519319 ECM2O94769 699 aaPredicted RBP12.54□□□□□ -0.4
PCAT1-201ENST00000519319 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
PCAT1-201ENST00000519319 FAM212AQ96EL1 285 aa12.54□□□□□ -0.4
PCAT1-201ENST00000519319 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
PCAT1-201ENST00000519319 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
PCAT1-201ENST00000519319 CHRM1P11229 460 aaPredicted RBP12.41□□□□□ -0.42
PCAT1-201ENST00000519319 RGL2O15211 777 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms