RNA–Protein interactions for RNA: ENST00000398869.2

RPL5P35-201, Transcript of ribosomal protein L5 pseudogene 35, humanhuman

BASIC

Gene RPL5P35, Length 816 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL5P35-201ENST00000398869 AEBP2Q6ZN18 517 aaPredicted RBP24.03■■□□□ 1.44
RPL5P35-201ENST00000398869 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
RPL5P35-201ENST00000398869 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
RPL5P35-201ENST00000398869 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
RPL5P35-201ENST00000398869 FOXD1Q16676 465 aa19.23■□□□□ 0.67
RPL5P35-201ENST00000398869 NISCHQ9Y2I1 1504 aa19.16■□□□□ 0.66
RPL5P35-201ENST00000398869 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
RPL5P35-201ENST00000398869 MSH5O43196 834 aa18.16■□□□□ 0.5
RPL5P35-201ENST00000398869 PIAS4Q8N2W9 510 aaPredicted RBP17.78■□□□□ 0.44
RPL5P35-201ENST00000398869 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
RPL5P35-201ENST00000398869 ADRA2BP18089 450 aa17.44■□□□□ 0.38
RPL5P35-201ENST00000398869 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
RPL5P35-201ENST00000398869 CCDC180Q9P1Z9 1646 aa17.08■□□□□ 0.32
RPL5P35-201ENST00000398869 ABCC9O60706 1549 aa16.69■□□□□ 0.26
RPL5P35-201ENST00000398869 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
RPL5P35-201ENST00000398869 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
RPL5P35-201ENST00000398869 RB1CC1Q8TDY2 1594 aa16.06■□□□□ 0.16
RPL5P35-201ENST00000398869 NACADO15069 1562 aa16.02■□□□□ 0.16
RPL5P35-201ENST00000398869 ZCCHC6Q5VYS8 1495 aaKnown RBP15.99■□□□□ 0.15
RPL5P35-201ENST00000398869 DCAF8L2P0C7V8 631 aa15.99■□□□□ 0.15
RPL5P35-201ENST00000398869 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
RPL5P35-201ENST00000398869 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
RPL5P35-201ENST00000398869 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
RPL5P35-201ENST00000398869 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
RPL5P35-201ENST00000398869 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
RPL5P35-201ENST00000398869 UNC13AQ9UPW8 1703 aa15.72■□□□□ 0.11
RPL5P35-201ENST00000398869 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
RPL5P35-201ENST00000398869 BICRAQ9NZM4 1560 aa15.55■□□□□ 0.08
RPL5P35-201ENST00000398869 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
RPL5P35-201ENST00000398869 DCAF8L1A6NGE4 600 aa15.49■□□□□ 0.07
RPL5P35-201ENST00000398869 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
RPL5P35-201ENST00000398869 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
RPL5P35-201ENST00000398869 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
RPL5P35-201ENST00000398869 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
RPL5P35-201ENST00000398869 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
RPL5P35-201ENST00000398869 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
RPL5P35-201ENST00000398869 CC2D2AQ9P2K1 1620 aa15.1■□□□□ 0.01
RPL5P35-201ENST00000398869 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
RPL5P35-201ENST00000398869 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
RPL5P35-201ENST00000398869 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
RPL5P35-201ENST00000398869 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
RPL5P35-201ENST00000398869 SMARCA4P51532 1647 aa14.9□□□□□ -0.02
RPL5P35-201ENST00000398869 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
RPL5P35-201ENST00000398869 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
RPL5P35-201ENST00000398869 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
RPL5P35-201ENST00000398869 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.04
RPL5P35-201ENST00000398869 NCAPD3P42695 1498 aa14.74□□□□□ -0.05
RPL5P35-201ENST00000398869 HMGXB3Q12766 1538 aa14.73□□□□□ -0.05
RPL5P35-201ENST00000398869 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
RPL5P35-201ENST00000398869 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
RPL5P35-201ENST00000398869 WIZO95785 1651 aa14.64□□□□□ -0.07
RPL5P35-201ENST00000398869 POTEHQ6S545 545 aa14.59□□□□□ -0.07
RPL5P35-201ENST00000398869 RSF1Q96T23 1441 aaPredicted RBP14.58□□□□□ -0.07
RPL5P35-201ENST00000398869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.08
RPL5P35-201ENST00000398869 TOP2AP11388 1531 aaKnown RBP14.49□□□□□ -0.09
RPL5P35-201ENST00000398869 NESP48681 1621 aa14.43□□□□□ -0.1
RPL5P35-201ENST00000398869 LAMC3Q9Y6N6 1575 aa14.41□□□□□ -0.1
RPL5P35-201ENST00000398869 ERCC6Q03468 1493 aa14.4□□□□□ -0.1
RPL5P35-201ENST00000398869 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
RPL5P35-201ENST00000398869 CUX2O14529 1486 aa14.38□□□□□ -0.11
RPL5P35-201ENST00000398869 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
RPL5P35-201ENST00000398869 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
RPL5P35-201ENST00000398869 DSG3P32926 999 aa14.31□□□□□ -0.12
RPL5P35-201ENST00000398869 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
RPL5P35-201ENST00000398869 PDS5BQ9NTI5 1447 aa14.28□□□□□ -0.12
RPL5P35-201ENST00000398869 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
RPL5P35-201ENST00000398869 NPM3O75607 178 aaKnown RBP14.27□□□□□ -0.13
RPL5P35-201ENST00000398869 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
RPL5P35-201ENST00000398869 THOC2Q8NI27 1593 aaKnown RBP14.25□□□□□ -0.13
RPL5P35-201ENST00000398869 CFTRP13569 1480 aa14.25□□□□□ -0.13
RPL5P35-201ENST00000398869 SUPT5HO00267 1087 aaKnown RBP14.24□□□□□ -0.13
RPL5P35-201ENST00000398869 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
RPL5P35-201ENST00000398869 FANCD2Q9BXW9 1451 aa14.2□□□□□ -0.14
RPL5P35-201ENST00000398869 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
RPL5P35-201ENST00000398869 CAPN15O75808 1086 aa14.19□□□□□ -0.14
RPL5P35-201ENST00000398869 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
RPL5P35-201ENST00000398869 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
RPL5P35-201ENST00000398869 WDR62O43379 1518 aa14.12□□□□□ -0.15
RPL5P35-201ENST00000398869 URB2Q14146 1524 aaKnown RBP14.05□□□□□ -0.16
RPL5P35-201ENST00000398869 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
RPL5P35-201ENST00000398869 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
RPL5P35-201ENST00000398869 ABCC8Q09428 1581 aa13.95□□□□□ -0.18
RPL5P35-201ENST00000398869 CUX1P39880 1505 aa13.88□□□□□ -0.19
RPL5P35-201ENST00000398869 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
RPL5P35-201ENST00000398869 ABCB7O75027 752 aa13.85□□□□□ -0.19
RPL5P35-201ENST00000398869 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
RPL5P35-201ENST00000398869 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
RPL5P35-201ENST00000398869 FGD5Q6ZNL6 1462 aa13.83□□□□□ -0.2
RPL5P35-201ENST00000398869 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
RPL5P35-201ENST00000398869 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
RPL5P35-201ENST00000398869 EIF4G3O43432 1585 aaKnown RBP13.81□□□□□ -0.2
RPL5P35-201ENST00000398869 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
RPL5P35-201ENST00000398869 WRNQ14191 1432 aaPredicted RBP eCLIP13.79□□□□□ -0.2
RPL5P35-201ENST00000398869 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
RPL5P35-201ENST00000398869 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
RPL5P35-201ENST00000398869 SYNJ1O43426 1573 aa13.78□□□□□ -0.2
RPL5P35-201ENST00000398869 BIVM-ERCC5R4GMW8 1640 aa13.78□□□□□ -0.2
RPL5P35-201ENST00000398869 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
RPL5P35-201ENST00000398869 SOGA1O94964 1423 aa13.76□□□□□ -0.21
RPL5P35-201ENST00000398869 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms