RNA–Protein interactions for RNA: ENST00000509497.1

AC139720.1-201, humanhuman

TSL 3 BASIC

Gene AC139720.1, Length 512 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC139720.1-201ENST00000509497 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
AC139720.1-201ENST00000509497 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
AC139720.1-201ENST00000509497 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
AC139720.1-201ENST00000509497 PHF23Q9BUL5 403 aaPredicted RBP21.51■■□□□ 1.03
AC139720.1-201ENST00000509497 FOXD1Q16676 465 aa20.23■□□□□ 0.83
AC139720.1-201ENST00000509497 PLPPR3Q6T4P5 718 aa19.7■□□□□ 0.74
AC139720.1-201ENST00000509497 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
AC139720.1-201ENST00000509497 ADRA2BP18089 450 aa19.12■□□□□ 0.65
AC139720.1-201ENST00000509497 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
AC139720.1-201ENST00000509497 MSH5O43196 834 aa18.81■□□□□ 0.6
AC139720.1-201ENST00000509497 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
AC139720.1-201ENST00000509497 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
AC139720.1-201ENST00000509497 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
AC139720.1-201ENST00000509497 PPP4R3CPQ6ZMV5 832 aa17.32■□□□□ 0.36
AC139720.1-201ENST00000509497 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
AC139720.1-201ENST00000509497 CNKSR2Q8WXI2 1034 aa16.91■□□□□ 0.3
AC139720.1-201ENST00000509497 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
AC139720.1-201ENST00000509497 DCAF8L1A6NGE4 600 aa16.7■□□□□ 0.26
AC139720.1-201ENST00000509497 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
AC139720.1-201ENST00000509497 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
AC139720.1-201ENST00000509497 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
AC139720.1-201ENST00000509497 KCNA4P22459 653 aa16.43■□□□□ 0.22
AC139720.1-201ENST00000509497 CACNB1Q02641 598 aaPredicted RBP16.06■□□□□ 0.16
AC139720.1-201ENST00000509497 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
AC139720.1-201ENST00000509497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.16
AC139720.1-201ENST00000509497 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
AC139720.1-201ENST00000509497 C1QBPQ07021 282 aaKnown RBP15.85■□□□□ 0.13
AC139720.1-201ENST00000509497 SLC4A2P04920 1241 aa15.65■□□□□ 0.1
AC139720.1-201ENST00000509497 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
AC139720.1-201ENST00000509497 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
AC139720.1-201ENST00000509497 EHMT2Q96KQ7 1210 aa15.45■□□□□ 0.06
AC139720.1-201ENST00000509497 CAPN15O75808 1086 aa15.39■□□□□ 0.05
AC139720.1-201ENST00000509497 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
AC139720.1-201ENST00000509497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
AC139720.1-201ENST00000509497 HNRNPUL2Q1KMD3 747 aaKnown RBP15.31■□□□□ 0.04
AC139720.1-201ENST00000509497 APLP2Q06481 763 aa15.26■□□□□ 0.03
AC139720.1-201ENST00000509497 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
AC139720.1-201ENST00000509497 SAMD1Q6SPF0 538 aaPredicted RBP15.23■□□□□ 0.03
AC139720.1-201ENST00000509497 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
AC139720.1-201ENST00000509497 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
AC139720.1-201ENST00000509497 DSG3P32926 999 aa15.15■□□□□ 0.02
AC139720.1-201ENST00000509497 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
AC139720.1-201ENST00000509497 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
AC139720.1-201ENST00000509497 ZBTB22O15209 634 aa15.08■□□□□ 0
AC139720.1-201ENST00000509497 ABCB7O75027 752 aa15.06■□□□□ 0
AC139720.1-201ENST00000509497 ATF5Q9Y2D1 282 aaPredicted RBP14.88□□□□□ -0.03
AC139720.1-201ENST00000509497 POLA2Q14181 598 aa14.84□□□□□ -0.03
AC139720.1-201ENST00000509497 ATXN8OSP0DMR3 200 aa14.69□□□□□ -0.06
AC139720.1-201ENST00000509497 ZBTB12Q9Y330 459 aaPredicted RBP14.51□□□□□ -0.09
AC139720.1-201ENST00000509497 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
AC139720.1-201ENST00000509497 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
AC139720.1-201ENST00000509497 FBLN2P98095 1184 aa14.32□□□□□ -0.12
AC139720.1-201ENST00000509497 MKRN4PQ13434 485 aaPredicted RBP14.18□□□□□ -0.14
AC139720.1-201ENST00000509497 AKT1S1Q96B36 256 aa14.17□□□□□ -0.14
AC139720.1-201ENST00000509497 POTEHQ6S545 545 aa14.11□□□□□ -0.15
AC139720.1-201ENST00000509497 NISCHQ9Y2I1 1504 aa14.09□□□□□ -0.15
AC139720.1-201ENST00000509497 SPDYE2BA6NHP3 402 aa14.07□□□□□ -0.16
AC139720.1-201ENST00000509497 SPDYE6P0CI01 402 aa14.07□□□□□ -0.16
AC139720.1-201ENST00000509497 SPDYE2Q495Y8 402 aa14.07□□□□□ -0.16
AC139720.1-201ENST00000509497 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
AC139720.1-201ENST00000509497 CHRDL2Q6WN34 429 aa14.05□□□□□ -0.16
AC139720.1-201ENST00000509497 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
AC139720.1-201ENST00000509497 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
AC139720.1-201ENST00000509497 SSUH2Q9Y2M2 353 aa13.88□□□□□ -0.19
AC139720.1-201ENST00000509497 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
AC139720.1-201ENST00000509497 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
AC139720.1-201ENST00000509497 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
AC139720.1-201ENST00000509497 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
AC139720.1-201ENST00000509497 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
AC139720.1-201ENST00000509497 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
AC139720.1-201ENST00000509497 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
AC139720.1-201ENST00000509497 FKBP8Q14318 412 aa13.61□□□□□ -0.23
AC139720.1-201ENST00000509497 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
AC139720.1-201ENST00000509497 HAX1O00165 279 aa13.52□□□□□ -0.25
AC139720.1-201ENST00000509497 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
AC139720.1-201ENST00000509497 STAG3Q9UJ98 1225 aa13.45□□□□□ -0.26
AC139720.1-201ENST00000509497 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
AC139720.1-201ENST00000509497 EVX2Q03828 476 aa13.31□□□□□ -0.28
AC139720.1-201ENST00000509497 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
AC139720.1-201ENST00000509497 PROM2Q8N271 834 aa13.29□□□□□ -0.28
AC139720.1-201ENST00000509497 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
AC139720.1-201ENST00000509497 C19orf67A6NJJ6 358 aa13.25□□□□□ -0.29
AC139720.1-201ENST00000509497 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
AC139720.1-201ENST00000509497 MIER1Q8N108 512 aa13.09□□□□□ -0.31
AC139720.1-201ENST00000509497 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
AC139720.1-201ENST00000509497 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
AC139720.1-201ENST00000509497 AMER1Q5JTC6 1135 aaPredicted RBP13.07□□□□□ -0.32
AC139720.1-201ENST00000509497 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
AC139720.1-201ENST00000509497 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
AC139720.1-201ENST00000509497 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
AC139720.1-201ENST00000509497 GABBR2O75899 941 aa13.03□□□□□ -0.32
AC139720.1-201ENST00000509497 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
AC139720.1-201ENST00000509497 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
AC139720.1-201ENST00000509497 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
AC139720.1-201ENST00000509497 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
AC139720.1-201ENST00000509497 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
AC139720.1-201ENST00000509497 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
AC139720.1-201ENST00000509497 CLCN6P51797 869 aa12.85□□□□□ -0.35
AC139720.1-201ENST00000509497 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
AC139720.1-201ENST00000509497 VASPP50552 380 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms