RNA–Protein interactions for RNA: ENST00000418954.2

LINC02246-202, Transcript of long intergenic non-protein coding RNA 2246, humanhuman

TSL 2 BASIC

Gene LINC02246, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02246-202ENST00000418954 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
LINC02246-202ENST00000418954 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
LINC02246-202ENST00000418954 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
LINC02246-202ENST00000418954 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
LINC02246-202ENST00000418954 PLPPR3Q6T4P5 718 aa18.93■□□□□ 0.62
LINC02246-202ENST00000418954 FOXD1Q16676 465 aa18.3■□□□□ 0.52
LINC02246-202ENST00000418954 ADRA2BP18089 450 aa17.8■□□□□ 0.44
LINC02246-202ENST00000418954 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
LINC02246-202ENST00000418954 PIAS4Q8N2W9 510 aaPredicted RBP17.37■□□□□ 0.37
LINC02246-202ENST00000418954 MSH5O43196 834 aa16.87■□□□□ 0.29
LINC02246-202ENST00000418954 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
LINC02246-202ENST00000418954 KCNA4P22459 653 aa16.57■□□□□ 0.24
LINC02246-202ENST00000418954 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
LINC02246-202ENST00000418954 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
LINC02246-202ENST00000418954 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
LINC02246-202ENST00000418954 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
LINC02246-202ENST00000418954 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
LINC02246-202ENST00000418954 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
LINC02246-202ENST00000418954 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
LINC02246-202ENST00000418954 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
LINC02246-202ENST00000418954 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
LINC02246-202ENST00000418954 HOXD11P31277 338 aaPredicted RBP15.65■□□□□ 0.1
LINC02246-202ENST00000418954 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
LINC02246-202ENST00000418954 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
LINC02246-202ENST00000418954 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
LINC02246-202ENST00000418954 ZBTB22O15209 634 aa15.21■□□□□ 0.03
LINC02246-202ENST00000418954 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
LINC02246-202ENST00000418954 SLC4A2P04920 1241 aa15.08■□□□□ 0
LINC02246-202ENST00000418954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC02246-202ENST00000418954 MYCNP04198 464 aaPredicted RBP14.91□□□□□ -0.02
LINC02246-202ENST00000418954 POTEDQ86YR6 584 aa14.79□□□□□ -0.04
LINC02246-202ENST00000418954 ATXN8OSP0DMR3 200 aa14.72□□□□□ -0.05
LINC02246-202ENST00000418954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
LINC02246-202ENST00000418954 HNRNPUL2Q1KMD3 747 aaKnown RBP14.7□□□□□ -0.06
LINC02246-202ENST00000418954 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
LINC02246-202ENST00000418954 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
LINC02246-202ENST00000418954 APLP2Q06481 763 aa14.51□□□□□ -0.09
LINC02246-202ENST00000418954 RNF39Q9H2S5 420 aa14.43□□□□□ -0.1
LINC02246-202ENST00000418954 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
LINC02246-202ENST00000418954 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
LINC02246-202ENST00000418954 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
LINC02246-202ENST00000418954 NISCHQ9Y2I1 1504 aa14.16□□□□□ -0.14
LINC02246-202ENST00000418954 SPINK5Q9NQ38 1064 aaPredicted RBP14.15□□□□□ -0.14
LINC02246-202ENST00000418954 CAPN15O75808 1086 aa14.13□□□□□ -0.15
LINC02246-202ENST00000418954 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
LINC02246-202ENST00000418954 POLA2Q14181 598 aa13.94□□□□□ -0.18
LINC02246-202ENST00000418954 FKBP8Q14318 412 aa13.92□□□□□ -0.18
LINC02246-202ENST00000418954 FBLN2P98095 1184 aa13.88□□□□□ -0.19
LINC02246-202ENST00000418954 CACNB1Q02641 598 aaPredicted RBP13.86□□□□□ -0.19
LINC02246-202ENST00000418954 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
LINC02246-202ENST00000418954 ABCB7O75027 752 aa13.84□□□□□ -0.19
LINC02246-202ENST00000418954 DSG3P32926 999 aa13.82□□□□□ -0.2
LINC02246-202ENST00000418954 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
LINC02246-202ENST00000418954 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
LINC02246-202ENST00000418954 PROM2Q8N271 834 aa13.48□□□□□ -0.25
LINC02246-202ENST00000418954 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
LINC02246-202ENST00000418954 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
LINC02246-202ENST00000418954 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
LINC02246-202ENST00000418954 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
LINC02246-202ENST00000418954 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
LINC02246-202ENST00000418954 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
LINC02246-202ENST00000418954 SSUH2Q9Y2M2 353 aa13.35□□□□□ -0.27
LINC02246-202ENST00000418954 AMER1Q5JTC6 1135 aaPredicted RBP13.25□□□□□ -0.29
LINC02246-202ENST00000418954 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
LINC02246-202ENST00000418954 PABPN1Q86U42 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC02246-202ENST00000418954 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
LINC02246-202ENST00000418954 STAG3Q9UJ98 1225 aa13.15□□□□□ -0.3
LINC02246-202ENST00000418954 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
LINC02246-202ENST00000418954 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
LINC02246-202ENST00000418954 SPDYE1Q8NFV5 336 aaPredicted RBP13□□□□□ -0.33
LINC02246-202ENST00000418954 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
LINC02246-202ENST00000418954 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
LINC02246-202ENST00000418954 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
LINC02246-202ENST00000418954 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
LINC02246-202ENST00000418954 MIER1Q8N108 512 aa12.92□□□□□ -0.34
LINC02246-202ENST00000418954 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
LINC02246-202ENST00000418954 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
LINC02246-202ENST00000418954 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
LINC02246-202ENST00000418954 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
LINC02246-202ENST00000418954 PRR29P0C7W0 189 aa12.82□□□□□ -0.36
LINC02246-202ENST00000418954 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
LINC02246-202ENST00000418954 CREBZFQ9NS37 354 aa12.68□□□□□ -0.38
LINC02246-202ENST00000418954 PKD2Q13563 968 aa12.65□□□□□ -0.38
LINC02246-202ENST00000418954 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
LINC02246-202ENST00000418954 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
LINC02246-202ENST00000418954 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC02246-202ENST00000418954 MNX1P50219 401 aaPredicted RBP12.57□□□□□ -0.4
LINC02246-202ENST00000418954 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
LINC02246-202ENST00000418954 GSE1Q14687 1217 aa12.56□□□□□ -0.4
LINC02246-202ENST00000418954 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
LINC02246-202ENST00000418954 NUBP1P53384 320 aa12.55□□□□□ -0.4
LINC02246-202ENST00000418954 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.41
LINC02246-202ENST00000418954 FAM212AQ96EL1 285 aa12.51□□□□□ -0.41
LINC02246-202ENST00000418954 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC02246-202ENST00000418954 DCAF8L2P0C7V8 631 aa12.49□□□□□ -0.41
LINC02246-202ENST00000418954 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
LINC02246-202ENST00000418954 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
LINC02246-202ENST00000418954 DCAF8Q5TAQ9 597 aa12.47□□□□□ -0.41
LINC02246-202ENST00000418954 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
LINC02246-202ENST00000418954 RASEFQ8IZ41 740 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms