RNA–Protein interactions for RNA: ENST00000532254.1

NPIPB6-201, Transcript of nuclear pore complex interacting protein family member B6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPB6, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB6-201ENST00000532254 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
NPIPB6-201ENST00000532254 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
NPIPB6-201ENST00000532254 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
NPIPB6-201ENST00000532254 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.04
NPIPB6-201ENST00000532254 PHF23Q9BUL5 403 aaPredicted RBP14.92□□□□□ -0.02
NPIPB6-201ENST00000532254 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
NPIPB6-201ENST00000532254 FOXD1Q16676 465 aa14.31□□□□□ -0.12
NPIPB6-201ENST00000532254 MSH5O43196 834 aa13.78□□□□□ -0.2
NPIPB6-201ENST00000532254 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
NPIPB6-201ENST00000532254 ZCCHC6Q5VYS8 1495 aaKnown RBP13.39□□□□□ -0.27
NPIPB6-201ENST00000532254 CCDC180Q9P1Z9 1646 aa13.38□□□□□ -0.27
NPIPB6-201ENST00000532254 SUPT5HO00267 1087 aaKnown RBP13.2□□□□□ -0.3
NPIPB6-201ENST00000532254 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
NPIPB6-201ENST00000532254 DCAF1Q9Y4B6 1507 aa13.02□□□□□ -0.32
NPIPB6-201ENST00000532254 MYO15BQ96JP2 1530 aa12.91□□□□□ -0.34
NPIPB6-201ENST00000532254 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
NPIPB6-201ENST00000532254 PLPPR3Q6T4P5 718 aa12.88□□□□□ -0.35
NPIPB6-201ENST00000532254 HRCP23327 699 aa12.77□□□□□ -0.37
NPIPB6-201ENST00000532254 PPP6R1Q9UPN7 881 aa12.67□□□□□ -0.38
NPIPB6-201ENST00000532254 ABCC9O60706 1549 aa12.65□□□□□ -0.38
NPIPB6-201ENST00000532254 PCGF6Q9BYE7 350 aa12.62□□□□□ -0.39
NPIPB6-201ENST00000532254 ADRA2BP18089 450 aa12.58□□□□□ -0.4
NPIPB6-201ENST00000532254 RSF1Q96T23 1441 aaPredicted RBP12.52□□□□□ -0.4
NPIPB6-201ENST00000532254 LOC105371045A0A1W2PR82 267 aa12.5□□□□□ -0.41
NPIPB6-201ENST00000532254 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
NPIPB6-201ENST00000532254 TRIM26Q12899 539 aaPredicted RBP12.43□□□□□ -0.42
NPIPB6-201ENST00000532254 RB1CC1Q8TDY2 1594 aa12.42□□□□□ -0.42
NPIPB6-201ENST00000532254 PPARGC1BQ86YN6 1023 aaKnown RBP12.37□□□□□ -0.43
NPIPB6-201ENST00000532254 NACADO15069 1562 aa12.36□□□□□ -0.43
NPIPB6-201ENST00000532254 TRIM41Q8WV44 630 aa12.35□□□□□ -0.43
NPIPB6-201ENST00000532254 CACNB1Q02641 598 aaPredicted RBP12.33□□□□□ -0.44
NPIPB6-201ENST00000532254 ZEB1P37275 1124 aaPredicted RBP12.27□□□□□ -0.45
NPIPB6-201ENST00000532254 CECR2Q9BXF3 1484 aa12.25□□□□□ -0.45
NPIPB6-201ENST00000532254 MROH2BQ7Z745 1585 aa12.24□□□□□ -0.45
NPIPB6-201ENST00000532254 FAM9AQ8IZU1 332 aaPredicted RBP12.16□□□□□ -0.46
NPIPB6-201ENST00000532254 BAZ1AQ9NRL2 1556 aaPredicted RBP12.15□□□□□ -0.46
NPIPB6-201ENST00000532254 WIZO95785 1651 aa12.14□□□□□ -0.47
NPIPB6-201ENST00000532254 EIF4G1Q04637 1599 aaKnown RBP12.11□□□□□ -0.47
NPIPB6-201ENST00000532254 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
NPIPB6-201ENST00000532254 EHMT2Q96KQ7 1210 aa11.99□□□□□ -0.49
NPIPB6-201ENST00000532254 DMRT2Q9Y5R5 561 aa11.98□□□□□ -0.49
NPIPB6-201ENST00000532254 SMARCA4P51532 1647 aa11.98□□□□□ -0.49
NPIPB6-201ENST00000532254 WRNQ14191 1432 aaPredicted RBP eCLIP11.95□□□□□ -0.5
NPIPB6-201ENST00000532254 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
NPIPB6-201ENST00000532254 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
NPIPB6-201ENST00000532254 EEA1Q15075 1411 aa11.91□□□□□ -0.5
NPIPB6-201ENST00000532254 ABCC8Q09428 1581 aa11.9□□□□□ -0.5
NPIPB6-201ENST00000532254 TNIKQ9UKE5 1360 aa11.88□□□□□ -0.51
NPIPB6-201ENST00000532254 CEP162Q5TB80 1403 aa11.88□□□□□ -0.51
NPIPB6-201ENST00000532254 CCER1Q8TC90 406 aaPredicted RBP11.84□□□□□ -0.51
NPIPB6-201ENST00000532254 SOGA1O94964 1423 aa11.84□□□□□ -0.51
NPIPB6-201ENST00000532254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
NPIPB6-201ENST00000532254 UNC13AQ9UPW8 1703 aa11.82□□□□□ -0.52
NPIPB6-201ENST00000532254 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
NPIPB6-201ENST00000532254 CSRNP3Q8WYN3 585 aa11.81□□□□□ -0.52
NPIPB6-201ENST00000532254 PEG3Q9GZU2 1588 aa11.79□□□□□ -0.52
NPIPB6-201ENST00000532254 PELP1Q8IZL8 1130 aaKnown RBP11.79□□□□□ -0.52
NPIPB6-201ENST00000532254 GOLGA3Q08378 1498 aa11.79□□□□□ -0.52
NPIPB6-201ENST00000532254 SCAF1Q9H7N4 1312 aaKnown RBP11.78□□□□□ -0.52
NPIPB6-201ENST00000532254 RUSC2Q8N2Y8 1516 aa11.75□□□□□ -0.53
NPIPB6-201ENST00000532254 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
NPIPB6-201ENST00000532254 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
NPIPB6-201ENST00000532254 CEP164Q9UPV0 1460 aa11.72□□□□□ -0.53
NPIPB6-201ENST00000532254 KIF21BO75037 1637 aa11.7□□□□□ -0.54
NPIPB6-201ENST00000532254 KCNA4P22459 653 aa11.69□□□□□ -0.54
NPIPB6-201ENST00000532254 DIEXFQ68CQ4 756 aaKnown RBP11.69□□□□□ -0.54
NPIPB6-201ENST00000532254 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
NPIPB6-201ENST00000532254 PABPN1Q86U42 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
NPIPB6-201ENST00000532254 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
NPIPB6-201ENST00000532254 ATAD2BQ9ULI0 1458 aa11.66□□□□□ -0.54
NPIPB6-201ENST00000532254 TTBK1Q5TCY1 1321 aaPredicted RBP11.66□□□□□ -0.54
NPIPB6-201ENST00000532254 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.54
NPIPB6-201ENST00000532254 RNF39Q9H2S5 420 aa11.65□□□□□ -0.54
NPIPB6-201ENST00000532254 CLIP1P30622 1438 aa11.63□□□□□ -0.55
NPIPB6-201ENST00000532254 CENPBP07199 599 aaPredicted RBP11.63□□□□□ -0.55
NPIPB6-201ENST00000532254 VPS8Q8N3P4 1428 aa11.62□□□□□ -0.55
NPIPB6-201ENST00000532254 NEUROD1Q13562 356 aa11.61□□□□□ -0.55
NPIPB6-201ENST00000532254 ZNF316A6NFI3 1004 aaPredicted RBP11.59□□□□□ -0.55
NPIPB6-201ENST00000532254 RAPGEF2Q9Y4G8 1499 aa11.56□□□□□ -0.56
NPIPB6-201ENST00000532254 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
NPIPB6-201ENST00000532254 APLP2Q06481 763 aa11.53□□□□□ -0.56
NPIPB6-201ENST00000532254 ERICH3Q5RHP9 1530 aa11.51□□□□□ -0.57
NPIPB6-201ENST00000532254 POTEHQ6S545 545 aa11.51□□□□□ -0.57
NPIPB6-201ENST00000532254 GTF3C3Q9Y5Q9 886 aa11.51□□□□□ -0.57
NPIPB6-201ENST00000532254 HNRNPUL2Q1KMD3 747 aaKnown RBP11.5□□□□□ -0.57
NPIPB6-201ENST00000532254 BIVM-ERCC5R4GMW8 1640 aa11.5□□□□□ -0.57
NPIPB6-201ENST00000532254 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
NPIPB6-201ENST00000532254 DCAF8L1A6NGE4 600 aa11.47□□□□□ -0.57
NPIPB6-201ENST00000532254 CLSPNQ9HAW4 1339 aa11.47□□□□□ -0.57
NPIPB6-201ENST00000532254 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
NPIPB6-201ENST00000532254 C1QBPQ07021 282 aaKnown RBP11.45□□□□□ -0.58
NPIPB6-201ENST00000532254 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
NPIPB6-201ENST00000532254 NCAPD3P42695 1498 aa11.44□□□□□ -0.58
NPIPB6-201ENST00000532254 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
NPIPB6-201ENST00000532254 KIF27Q86VH2 1401 aa11.4□□□□□ -0.58
NPIPB6-201ENST00000532254 CUX1P39880 1505 aa11.4□□□□□ -0.59
NPIPB6-201ENST00000532254 MIER1Q8N108 512 aa11.39□□□□□ -0.59
NPIPB6-201ENST00000532254 RRBP1Q9P2E9 1410 aaKnown RBP11.39□□□□□ -0.59
NPIPB6-201ENST00000532254 DHX57Q6P158 1386 aaKnown RBP11.38□□□□□ -0.59
NPIPB6-201ENST00000532254 CFTRP13569 1480 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms