RNA–Protein interactions for RNA: ENST00000609366.5

LINC00635-221, long intergenic non-protein coding RNA 635, humanhuman

TSL 5 BASIC

Gene LINC00635, Length 784 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00635-221ENST00000609366 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
LINC00635-221ENST00000609366 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
LINC00635-221ENST00000609366 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
LINC00635-221ENST00000609366 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
LINC00635-221ENST00000609366 FOXD1Q16676 465 aa18.95■□□□□ 0.62
LINC00635-221ENST00000609366 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
LINC00635-221ENST00000609366 NISCHQ9Y2I1 1504 aa18.25■□□□□ 0.51
LINC00635-221ENST00000609366 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
LINC00635-221ENST00000609366 ADRA2BP18089 450 aa17.79■□□□□ 0.44
LINC00635-221ENST00000609366 PIAS4Q8N2W9 510 aaPredicted RBP17.71■□□□□ 0.43
LINC00635-221ENST00000609366 MSH5O43196 834 aa17.61■□□□□ 0.41
LINC00635-221ENST00000609366 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
LINC00635-221ENST00000609366 ABCC9O60706 1549 aa17.09■□□□□ 0.33
LINC00635-221ENST00000609366 CCDC180Q9P1Z9 1646 aa16.59■□□□□ 0.25
LINC00635-221ENST00000609366 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
LINC00635-221ENST00000609366 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
LINC00635-221ENST00000609366 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
LINC00635-221ENST00000609366 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
LINC00635-221ENST00000609366 PPP4R3CPQ6ZMV5 832 aa16.05■□□□□ 0.16
LINC00635-221ENST00000609366 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
LINC00635-221ENST00000609366 NACADO15069 1562 aa15.82■□□□□ 0.12
LINC00635-221ENST00000609366 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
LINC00635-221ENST00000609366 CNKSR2Q8WXI2 1034 aa15.7■□□□□ 0.1
LINC00635-221ENST00000609366 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
LINC00635-221ENST00000609366 BICRAQ9NZM4 1560 aa15.61■□□□□ 0.09
LINC00635-221ENST00000609366 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
LINC00635-221ENST00000609366 DCAF8L2P0C7V8 631 aa15.55■□□□□ 0.08
LINC00635-221ENST00000609366 RNF216Q9NWF9 866 aaPredicted RBP15.52■□□□□ 0.08
LINC00635-221ENST00000609366 DNAJC5Q9H3Z4 198 aa15.5■□□□□ 0.07
LINC00635-221ENST00000609366 CECR2Q9BXF3 1484 aa15.46■□□□□ 0.06
LINC00635-221ENST00000609366 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
LINC00635-221ENST00000609366 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
LINC00635-221ENST00000609366 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
LINC00635-221ENST00000609366 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
LINC00635-221ENST00000609366 SHROOM4Q9ULL8 1493 aa15.38■□□□□ 0.05
LINC00635-221ENST00000609366 ZCCHC6Q5VYS8 1495 aaKnown RBP15.3■□□□□ 0.04
LINC00635-221ENST00000609366 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
LINC00635-221ENST00000609366 EIF4G1Q04637 1599 aaKnown RBP15.27■□□□□ 0.03
LINC00635-221ENST00000609366 KCNA4P22459 653 aa15.13■□□□□ 0.01
LINC00635-221ENST00000609366 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
LINC00635-221ENST00000609366 CACNB1Q02641 598 aaPredicted RBP15.1■□□□□ 0.01
LINC00635-221ENST00000609366 SCRIBQ14160 1630 aa15.09■□□□□ 0.01
LINC00635-221ENST00000609366 RNF39Q9H2S5 420 aa15.08■□□□□ 0
LINC00635-221ENST00000609366 CUX2O14529 1486 aa14.95□□□□□ -0.02
LINC00635-221ENST00000609366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.03
LINC00635-221ENST00000609366 C1QBPQ07021 282 aaKnown RBP14.83□□□□□ -0.04
LINC00635-221ENST00000609366 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
LINC00635-221ENST00000609366 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
LINC00635-221ENST00000609366 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
LINC00635-221ENST00000609366 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
LINC00635-221ENST00000609366 SLC4A2P04920 1241 aa14.56□□□□□ -0.08
LINC00635-221ENST00000609366 NESP48681 1621 aa14.54□□□□□ -0.08
LINC00635-221ENST00000609366 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
LINC00635-221ENST00000609366 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
LINC00635-221ENST00000609366 HMGXB3Q12766 1538 aa14.47□□□□□ -0.09
LINC00635-221ENST00000609366 SMARCA2P51531 1590 aa14.42□□□□□ -0.1
LINC00635-221ENST00000609366 LAMC3Q9Y6N6 1575 aa14.36□□□□□ -0.11
LINC00635-221ENST00000609366 SMARCA4P51532 1647 aa14.34□□□□□ -0.11
LINC00635-221ENST00000609366 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
LINC00635-221ENST00000609366 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
LINC00635-221ENST00000609366 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
LINC00635-221ENST00000609366 PDS5BQ9NTI5 1447 aa14.29□□□□□ -0.12
LINC00635-221ENST00000609366 CAPN15O75808 1086 aa14.27□□□□□ -0.13
LINC00635-221ENST00000609366 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.13
LINC00635-221ENST00000609366 PEG3Q9GZU2 1588 aa14.23□□□□□ -0.13
LINC00635-221ENST00000609366 BAZ1AQ9NRL2 1556 aaPredicted RBP14.22□□□□□ -0.13
LINC00635-221ENST00000609366 MRC2Q9UBG0 1479 aa14.21□□□□□ -0.13
LINC00635-221ENST00000609366 WDR62O43379 1518 aa14.2□□□□□ -0.14
LINC00635-221ENST00000609366 DSG3P32926 999 aa14.18□□□□□ -0.14
LINC00635-221ENST00000609366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
LINC00635-221ENST00000609366 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
LINC00635-221ENST00000609366 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
LINC00635-221ENST00000609366 CADPSQ9ULU8 1353 aa14.13□□□□□ -0.15
LINC00635-221ENST00000609366 APLP2Q06481 763 aa14.1□□□□□ -0.15
LINC00635-221ENST00000609366 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
LINC00635-221ENST00000609366 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
LINC00635-221ENST00000609366 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
LINC00635-221ENST00000609366 MROH2BQ7Z745 1585 aa14.05□□□□□ -0.16
LINC00635-221ENST00000609366 CEP164Q9UPV0 1460 aa14.05□□□□□ -0.16
LINC00635-221ENST00000609366 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
LINC00635-221ENST00000609366 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
LINC00635-221ENST00000609366 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
LINC00635-221ENST00000609366 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
LINC00635-221ENST00000609366 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
LINC00635-221ENST00000609366 RSF1Q96T23 1441 aaPredicted RBP14.01□□□□□ -0.17
LINC00635-221ENST00000609366 FANCD2Q9BXW9 1451 aa13.99□□□□□ -0.17
LINC00635-221ENST00000609366 ABCB7O75027 752 aa13.98□□□□□ -0.17
LINC00635-221ENST00000609366 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
LINC00635-221ENST00000609366 ZBTB22O15209 634 aa13.93□□□□□ -0.18
LINC00635-221ENST00000609366 WIZO95785 1651 aa13.93□□□□□ -0.18
LINC00635-221ENST00000609366 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
LINC00635-221ENST00000609366 CFTRP13569 1480 aa13.88□□□□□ -0.19
LINC00635-221ENST00000609366 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
LINC00635-221ENST00000609366 CYB5RLQ6IPT4 315 aa13.85□□□□□ -0.19
LINC00635-221ENST00000609366 TOP2AP11388 1531 aaKnown RBP13.82□□□□□ -0.2
LINC00635-221ENST00000609366 ATF5Q9Y2D1 282 aaPredicted RBP13.82□□□□□ -0.2
LINC00635-221ENST00000609366 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
LINC00635-221ENST00000609366 ARAP1Q96P48 1450 aa13.8□□□□□ -0.2
LINC00635-221ENST00000609366 IFT140Q96RY7 1462 aa13.79□□□□□ -0.2
LINC00635-221ENST00000609366 POLA2Q14181 598 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms