RNA–Protein interactions for RNA: ENST00000343344.8

MYOCD-201, Transcript of myocardin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MYOCD, Length 2,817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYOCD-201ENST00000343344 NISCHQ9Y2I1 1504 aa16.1■□□□□ 0.17
MYOCD-201ENST00000343344 SHROOM4Q9ULL8 1493 aa13.87□□□□□ -0.19
MYOCD-201ENST00000343344 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
MYOCD-201ENST00000343344 CCDC180Q9P1Z9 1646 aa13.65□□□□□ -0.22
MYOCD-201ENST00000343344 ZCCHC6Q5VYS8 1495 aaKnown RBP13.57□□□□□ -0.24
MYOCD-201ENST00000343344 SUPT5HO00267 1087 aaKnown RBP13.57□□□□□ -0.24
MYOCD-201ENST00000343344 DCAF1Q9Y4B6 1507 aa13.12□□□□□ -0.31
MYOCD-201ENST00000343344 CHIC1Q5VXU3 224 aa13.05□□□□□ -0.32
MYOCD-201ENST00000343344 MYO15BQ96JP2 1530 aa12.94□□□□□ -0.34
MYOCD-201ENST00000343344 ABCC9O60706 1549 aa12.92□□□□□ -0.34
MYOCD-201ENST00000343344 SCRIBQ14160 1630 aa12.92□□□□□ -0.34
MYOCD-201ENST00000343344 HRCP23327 699 aa12.88□□□□□ -0.35
MYOCD-201ENST00000343344 RSF1Q96T23 1441 aaPredicted RBP12.74□□□□□ -0.37
MYOCD-201ENST00000343344 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
MYOCD-201ENST00000343344 PPARGC1BQ86YN6 1023 aaKnown RBP12.69□□□□□ -0.38
MYOCD-201ENST00000343344 NACADO15069 1562 aa12.69□□□□□ -0.38
MYOCD-201ENST00000343344 PCGF6Q9BYE7 350 aa12.64□□□□□ -0.39
MYOCD-201ENST00000343344 CECR2Q9BXF3 1484 aa12.63□□□□□ -0.39
MYOCD-201ENST00000343344 AEBP2Q6ZN18 517 aaPredicted RBP12.61□□□□□ -0.39
MYOCD-201ENST00000343344 TRIM41Q8WV44 630 aa12.59□□□□□ -0.39
MYOCD-201ENST00000343344 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
MYOCD-201ENST00000343344 FAM9AQ8IZU1 332 aaPredicted RBP12.57□□□□□ -0.4
MYOCD-201ENST00000343344 MROH2BQ7Z745 1585 aa12.55□□□□□ -0.4
MYOCD-201ENST00000343344 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
MYOCD-201ENST00000343344 PELP1Q8IZL8 1130 aaKnown RBP12.52□□□□□ -0.4
MYOCD-201ENST00000343344 WIZO95785 1651 aa12.48□□□□□ -0.41
MYOCD-201ENST00000343344 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
MYOCD-201ENST00000343344 BAZ1AQ9NRL2 1556 aaPredicted RBP12.36□□□□□ -0.43
MYOCD-201ENST00000343344 TRIM26Q12899 539 aaPredicted RBP12.34□□□□□ -0.43
MYOCD-201ENST00000343344 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
MYOCD-201ENST00000343344 SMARCA4P51532 1647 aa12.27□□□□□ -0.44
MYOCD-201ENST00000343344 CCDC88BA6NC98 1476 aa12.24□□□□□ -0.45
MYOCD-201ENST00000343344 TOP2AP11388 1531 aaKnown RBP12.23□□□□□ -0.45
MYOCD-201ENST00000343344 ABCC8Q09428 1581 aa12.2□□□□□ -0.46
MYOCD-201ENST00000343344 SCAF1Q9H7N4 1312 aaKnown RBP12.2□□□□□ -0.46
MYOCD-201ENST00000343344 ZEB1P37275 1124 aaPredicted RBP12.19□□□□□ -0.46
MYOCD-201ENST00000343344 BICRAQ9NZM4 1560 aa12.18□□□□□ -0.46
MYOCD-201ENST00000343344 SMARCA2P51531 1590 aa12.17□□□□□ -0.46
MYOCD-201ENST00000343344 EIF4G1Q04637 1599 aaKnown RBP12.16□□□□□ -0.46
MYOCD-201ENST00000343344 TTBK1Q5TCY1 1321 aaPredicted RBP12.1□□□□□ -0.47
MYOCD-201ENST00000343344 SOGA1O94964 1423 aa12.08□□□□□ -0.48
MYOCD-201ENST00000343344 MYT1Q01538 1121 aa12.07□□□□□ -0.48
MYOCD-201ENST00000343344 UBTFP17480 764 aaKnown RBP12.05□□□□□ -0.48
MYOCD-201ENST00000343344 RUSC2Q8N2Y8 1516 aa12.03□□□□□ -0.48
MYOCD-201ENST00000343344 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.48
MYOCD-201ENST00000343344 ATAD2BQ9ULI0 1458 aa12.01□□□□□ -0.49
MYOCD-201ENST00000343344 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
MYOCD-201ENST00000343344 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
MYOCD-201ENST00000343344 PEG3Q9GZU2 1588 aa11.97□□□□□ -0.49
MYOCD-201ENST00000343344 CEP162Q5TB80 1403 aa11.96□□□□□ -0.49
MYOCD-201ENST00000343344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.94□□□□□ -0.5
MYOCD-201ENST00000343344 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
MYOCD-201ENST00000343344 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
MYOCD-201ENST00000343344 TNIKQ9UKE5 1360 aa11.92□□□□□ -0.5
MYOCD-201ENST00000343344 EEA1Q15075 1411 aa11.91□□□□□ -0.5
MYOCD-201ENST00000343344 SYNJ1O43426 1573 aa11.9□□□□□ -0.5
MYOCD-201ENST00000343344 CCER1Q8TC90 406 aaPredicted RBP11.89□□□□□ -0.51
MYOCD-201ENST00000343344 GOLGA3Q08378 1498 aa11.87□□□□□ -0.51
MYOCD-201ENST00000343344 NEUROD1Q13562 356 aa11.85□□□□□ -0.51
MYOCD-201ENST00000343344 ACIN1Q9UKV3 1341 aaKnown RBP11.83□□□□□ -0.52
MYOCD-201ENST00000343344 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
MYOCD-201ENST00000343344 CLIP1P30622 1438 aa11.77□□□□□ -0.53
MYOCD-201ENST00000343344 GTF3C3Q9Y5Q9 886 aa11.77□□□□□ -0.53
MYOCD-201ENST00000343344 NCAPD3P42695 1498 aa11.77□□□□□ -0.53
MYOCD-201ENST00000343344 RAPGEF2Q9Y4G8 1499 aa11.77□□□□□ -0.53
MYOCD-201ENST00000343344 APLP2Q06481 763 aa11.74□□□□□ -0.53
MYOCD-201ENST00000343344 PHF23Q9BUL5 403 aaPredicted RBP11.74□□□□□ -0.53
MYOCD-201ENST00000343344 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
MYOCD-201ENST00000343344 KIF21BO75037 1637 aa11.73□□□□□ -0.53
MYOCD-201ENST00000343344 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
MYOCD-201ENST00000343344 HMGXB3Q12766 1538 aa11.72□□□□□ -0.53
MYOCD-201ENST00000343344 DIEXFQ68CQ4 756 aaKnown RBP11.7□□□□□ -0.54
MYOCD-201ENST00000343344 CENPBP07199 599 aaPredicted RBP11.68□□□□□ -0.54
MYOCD-201ENST00000343344 CUX1P39880 1505 aa11.68□□□□□ -0.54
MYOCD-201ENST00000343344 VPS8Q8N3P4 1428 aa11.67□□□□□ -0.54
MYOCD-201ENST00000343344 BIVM-ERCC5R4GMW8 1640 aa11.66□□□□□ -0.54
MYOCD-201ENST00000343344 CFTRP13569 1480 aa11.65□□□□□ -0.54
MYOCD-201ENST00000343344 KIF27Q86VH2 1401 aa11.63□□□□□ -0.55
MYOCD-201ENST00000343344 PRXQ9BXM0 1461 aa11.61□□□□□ -0.55
MYOCD-201ENST00000343344 CADPSQ9ULU8 1353 aa11.59□□□□□ -0.55
MYOCD-201ENST00000343344 KANK4Q5T7N3 995 aaPredicted RBP11.57□□□□□ -0.56
MYOCD-201ENST00000343344 CUX2O14529 1486 aa11.56□□□□□ -0.56
MYOCD-201ENST00000343344 ERICH3Q5RHP9 1530 aa11.56□□□□□ -0.56
MYOCD-201ENST00000343344 CC2D2AQ9P2K1 1620 aa11.55□□□□□ -0.56
MYOCD-201ENST00000343344 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
MYOCD-201ENST00000343344 ARAP1Q96P48 1450 aa11.55□□□□□ -0.56
MYOCD-201ENST00000343344 YTHDC1Q96MU7 727 aaKnown RBP11.53□□□□□ -0.56
MYOCD-201ENST00000343344 IGF1RP08069 1367 aa11.52□□□□□ -0.57
MYOCD-201ENST00000343344 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
MYOCD-201ENST00000343344 ITGAEP38570 1179 aa11.5□□□□□ -0.57
MYOCD-201ENST00000343344 P3H3Q8IVL6 736 aa11.5□□□□□ -0.57
MYOCD-201ENST00000343344 ATP1B4Q9UN42 357 aaPredicted RBP11.49□□□□□ -0.57
MYOCD-201ENST00000343344 CARMIL1Q5VZK9 1371 aa11.49□□□□□ -0.57
MYOCD-201ENST00000343344 FANCD2Q9BXW9 1451 aa11.48□□□□□ -0.57
MYOCD-201ENST00000343344 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
MYOCD-201ENST00000343344 NESP48681 1621 aa11.47□□□□□ -0.57
MYOCD-201ENST00000343344 PRDM2Q13029 1718 aa11.47□□□□□ -0.57
MYOCD-201ENST00000343344 RAD54L2Q9Y4B4 1467 aa11.45□□□□□ -0.58
MYOCD-201ENST00000343344 MIER1Q8N108 512 aa11.43□□□□□ -0.58
MYOCD-201ENST00000343344 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms