RNA–Protein interactions for RNA: ENST00000456208.2

LRRC3B-205, Transcript of leucine rich repeat containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC3B, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3B-205ENST00000456208 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
LRRC3B-205ENST00000456208 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
LRRC3B-205ENST00000456208 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
LRRC3B-205ENST00000456208 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
LRRC3B-205ENST00000456208 FOXD1Q16676 465 aa21.89■■□□□ 1.09
LRRC3B-205ENST00000456208 POTEDQ86YR6 584 aa20.81■□□□□ 0.92
LRRC3B-205ENST00000456208 MSH5O43196 834 aa20.75■□□□□ 0.91
LRRC3B-205ENST00000456208 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
LRRC3B-205ENST00000456208 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
LRRC3B-205ENST00000456208 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
LRRC3B-205ENST00000456208 ADRA2BP18089 450 aa20.05■□□□□ 0.8
LRRC3B-205ENST00000456208 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
LRRC3B-205ENST00000456208 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.55
LRRC3B-205ENST00000456208 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
LRRC3B-205ENST00000456208 CACNB1Q02641 598 aaPredicted RBP17.99■□□□□ 0.47
LRRC3B-205ENST00000456208 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
LRRC3B-205ENST00000456208 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
LRRC3B-205ENST00000456208 HOXD11P31277 338 aaPredicted RBP17.75■□□□□ 0.43
LRRC3B-205ENST00000456208 RNF39Q9H2S5 420 aa17.62■□□□□ 0.41
LRRC3B-205ENST00000456208 CNKSR2Q8WXI2 1034 aa17.58■□□□□ 0.41
LRRC3B-205ENST00000456208 RNF216Q9NWF9 866 aaPredicted RBP17.53■□□□□ 0.4
LRRC3B-205ENST00000456208 C1QBPQ07021 282 aaKnown RBP17.4■□□□□ 0.38
LRRC3B-205ENST00000456208 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
LRRC3B-205ENST00000456208 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
LRRC3B-205ENST00000456208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.3
LRRC3B-205ENST00000456208 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
LRRC3B-205ENST00000456208 U3KPZ7 1027 aaPredicted RBP16.46■□□□□ 0.23
LRRC3B-205ENST00000456208 CAPN15O75808 1086 aa16.36■□□□□ 0.21
LRRC3B-205ENST00000456208 DSG3P32926 999 aa16.34■□□□□ 0.21
LRRC3B-205ENST00000456208 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
LRRC3B-205ENST00000456208 POTEHQ6S545 545 aa16.26■□□□□ 0.19
LRRC3B-205ENST00000456208 APLP2Q06481 763 aa16.13■□□□□ 0.17
LRRC3B-205ENST00000456208 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
LRRC3B-205ENST00000456208 KCNA4P22459 653 aa16.01■□□□□ 0.15
LRRC3B-205ENST00000456208 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
LRRC3B-205ENST00000456208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
LRRC3B-205ENST00000456208 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
LRRC3B-205ENST00000456208 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
LRRC3B-205ENST00000456208 ABCB7O75027 752 aa15.88■□□□□ 0.13
LRRC3B-205ENST00000456208 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
LRRC3B-205ENST00000456208 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
LRRC3B-205ENST00000456208 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
LRRC3B-205ENST00000456208 POLA2Q14181 598 aa15.47■□□□□ 0.07
LRRC3B-205ENST00000456208 CHRDL2Q6WN34 429 aa15.44■□□□□ 0.06
LRRC3B-205ENST00000456208 ZBTB12Q9Y330 459 aaPredicted RBP15.24■□□□□ 0.03
LRRC3B-205ENST00000456208 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
LRRC3B-205ENST00000456208 FOXD4L1Q9NU39 408 aa15.15■□□□□ 0.02
LRRC3B-205ENST00000456208 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
LRRC3B-205ENST00000456208 SP7Q8TDD2 431 aaPredicted RBP15.07■□□□□ 0
LRRC3B-205ENST00000456208 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
LRRC3B-205ENST00000456208 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
LRRC3B-205ENST00000456208 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
LRRC3B-205ENST00000456208 PIP4P2Q8N4L2 257 aa14.96□□□□□ -0.01
LRRC3B-205ENST00000456208 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
LRRC3B-205ENST00000456208 FXR2P51116 673 aaKnown RBP eCLIP14.85□□□□□ -0.03
LRRC3B-205ENST00000456208 HAX1O00165 279 aa14.82□□□□□ -0.04
LRRC3B-205ENST00000456208 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
LRRC3B-205ENST00000456208 SPDYE2BA6NHP3 402 aa14.69□□□□□ -0.06
LRRC3B-205ENST00000456208 SPDYE6P0CI01 402 aa14.69□□□□□ -0.06
LRRC3B-205ENST00000456208 SPDYE2Q495Y8 402 aa14.69□□□□□ -0.06
LRRC3B-205ENST00000456208 ZBTB22O15209 634 aa14.67□□□□□ -0.06
LRRC3B-205ENST00000456208 FBLN2P98095 1184 aa14.67□□□□□ -0.06
LRRC3B-205ENST00000456208 SPDYE1Q8NFV5 336 aaPredicted RBP14.54□□□□□ -0.08
LRRC3B-205ENST00000456208 EVX2Q03828 476 aa14.51□□□□□ -0.09
LRRC3B-205ENST00000456208 PRKAR2AP13861 404 aaKnown RBP14.49□□□□□ -0.09
LRRC3B-205ENST00000456208 CLEC11AQ9Y240 323 aa14.46□□□□□ -0.09
LRRC3B-205ENST00000456208 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
LRRC3B-205ENST00000456208 SSUH2Q9Y2M2 353 aa14.42□□□□□ -0.1
LRRC3B-205ENST00000456208 MKRN4PQ13434 485 aaPredicted RBP14.39□□□□□ -0.11
LRRC3B-205ENST00000456208 C19orf67A6NJJ6 358 aa14.39□□□□□ -0.11
LRRC3B-205ENST00000456208 GABBR2O75899 941 aa14.25□□□□□ -0.13
LRRC3B-205ENST00000456208 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
LRRC3B-205ENST00000456208 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
LRRC3B-205ENST00000456208 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
LRRC3B-205ENST00000456208 LHX8Q68G74 356 aa14.13□□□□□ -0.15
LRRC3B-205ENST00000456208 CLCN6P51797 869 aa14.05□□□□□ -0.16
LRRC3B-205ENST00000456208 CD44P16070 742 aaKnown RBP14.01□□□□□ -0.17
LRRC3B-205ENST00000456208 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
LRRC3B-205ENST00000456208 POTEIP0CG38 1075 aa13.89□□□□□ -0.19
LRRC3B-205ENST00000456208 DCBLD2Q96PD2 775 aa13.82□□□□□ -0.2
LRRC3B-205ENST00000456208 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
LRRC3B-205ENST00000456208 ZNF579Q8NAF0 562 aaKnown RBP13.8□□□□□ -0.2
LRRC3B-205ENST00000456208 ZRANB1Q9UGI0 708 aa13.75□□□□□ -0.21
LRRC3B-205ENST00000456208 CREBZFQ9NS37 354 aa13.72□□□□□ -0.21
LRRC3B-205ENST00000456208 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
LRRC3B-205ENST00000456208 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
LRRC3B-205ENST00000456208 GALR2O43603 387 aaPredicted RBP13.59□□□□□ -0.23
LRRC3B-205ENST00000456208 SPDYE4A6NLX3 237 aa13.58□□□□□ -0.24
LRRC3B-205ENST00000456208 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
LRRC3B-205ENST00000456208 PLSCR2Q9NRY7 297 aa13.5□□□□□ -0.25
LRRC3B-205ENST00000456208 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
LRRC3B-205ENST00000456208 PHF12Q96QT6 1004 aa13.48□□□□□ -0.25
LRRC3B-205ENST00000456208 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
LRRC3B-205ENST00000456208 POTEB2H3BUK9 544 aa13.41□□□□□ -0.26
LRRC3B-205ENST00000456208 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
LRRC3B-205ENST00000456208 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
LRRC3B-205ENST00000456208 C7P10643 843 aa13.32□□□□□ -0.28
LRRC3B-205ENST00000456208 SLC39A7Q92504 469 aa13.32□□□□□ -0.28
LRRC3B-205ENST00000456208 POTEMA6NI47 508 aa13.3□□□□□ -0.28
LRRC3B-205ENST00000456208 MS4A3Q96HJ5 214 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms