RNA–Protein interactions for RNA: ENST00000321871.10

TMEM108-201, Transcript of transmembrane protein 108, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM108, Length 3,744 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM108-201ENST00000321871 NISCHQ9Y2I1 1504 aa14.59□□□□□ -0.07
TMEM108-201ENST00000321871 SHROOM4Q9ULL8 1493 aa13.58□□□□□ -0.23
TMEM108-201ENST00000321871 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
TMEM108-201ENST00000321871 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.26
TMEM108-201ENST00000321871 PCGF6Q9BYE7 350 aa13.01□□□□□ -0.33
TMEM108-201ENST00000321871 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
TMEM108-201ENST00000321871 PPARGC1BQ86YN6 1023 aaKnown RBP12.78□□□□□ -0.36
TMEM108-201ENST00000321871 HRCP23327 699 aa12.75□□□□□ -0.37
TMEM108-201ENST00000321871 CHIC1Q5VXU3 224 aa12.75□□□□□ -0.37
TMEM108-201ENST00000321871 LOC105371045A0A1W2PR82 267 aa12.7□□□□□ -0.38
TMEM108-201ENST00000321871 FAM9AQ8IZU1 332 aaPredicted RBP12.67□□□□□ -0.38
TMEM108-201ENST00000321871 MYO15BQ96JP2 1530 aa12.48□□□□□ -0.41
TMEM108-201ENST00000321871 TTBK1Q5TCY1 1321 aaPredicted RBP12.45□□□□□ -0.42
TMEM108-201ENST00000321871 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
TMEM108-201ENST00000321871 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
TMEM108-201ENST00000321871 ZCCHC6Q5VYS8 1495 aaKnown RBP12.26□□□□□ -0.45
TMEM108-201ENST00000321871 CCER1Q8TC90 406 aaPredicted RBP12.2□□□□□ -0.46
TMEM108-201ENST00000321871 ZEB1P37275 1124 aaPredicted RBP12.19□□□□□ -0.46
TMEM108-201ENST00000321871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.14□□□□□ -0.47
TMEM108-201ENST00000321871 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
TMEM108-201ENST00000321871 YTHDC1Q96MU7 727 aaKnown RBP12.05□□□□□ -0.48
TMEM108-201ENST00000321871 DCAF1Q9Y4B6 1507 aa12.04□□□□□ -0.48
TMEM108-201ENST00000321871 UBTFP17480 764 aaKnown RBP11.97□□□□□ -0.49
TMEM108-201ENST00000321871 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
TMEM108-201ENST00000321871 PELP1Q8IZL8 1130 aaKnown RBP11.95□□□□□ -0.5
TMEM108-201ENST00000321871 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
TMEM108-201ENST00000321871 DIEXFQ68CQ4 756 aaKnown RBP11.9□□□□□ -0.5
TMEM108-201ENST00000321871 GTF3C3Q9Y5Q9 886 aa11.87□□□□□ -0.51
TMEM108-201ENST00000321871 HNRNPUL2Q1KMD3 747 aaKnown RBP11.86□□□□□ -0.51
TMEM108-201ENST00000321871 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
TMEM108-201ENST00000321871 APLP2Q06481 763 aa11.83□□□□□ -0.52
TMEM108-201ENST00000321871 SCRIBQ14160 1630 aa11.83□□□□□ -0.52
TMEM108-201ENST00000321871 NEUROD1Q13562 356 aa11.83□□□□□ -0.52
TMEM108-201ENST00000321871 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
TMEM108-201ENST00000321871 RSF1Q96T23 1441 aaPredicted RBP11.79□□□□□ -0.52
TMEM108-201ENST00000321871 ABCC9O60706 1549 aa11.79□□□□□ -0.52
TMEM108-201ENST00000321871 ITGAEP38570 1179 aa11.66□□□□□ -0.54
TMEM108-201ENST00000321871 RB1CC1Q8TDY2 1594 aa11.64□□□□□ -0.55
TMEM108-201ENST00000321871 PABPN1Q86U42 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
TMEM108-201ENST00000321871 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
TMEM108-201ENST00000321871 CECR2Q9BXF3 1484 aa11.62□□□□□ -0.55
TMEM108-201ENST00000321871 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
TMEM108-201ENST00000321871 ATP1B4Q9UN42 357 aaPredicted RBP11.56□□□□□ -0.56
TMEM108-201ENST00000321871 MIER1Q8N108 512 aa11.56□□□□□ -0.56
TMEM108-201ENST00000321871 CEP162Q5TB80 1403 aa11.48□□□□□ -0.57
TMEM108-201ENST00000321871 MROH2BQ7Z745 1585 aa11.47□□□□□ -0.57
TMEM108-201ENST00000321871 BCANQ96GW7 911 aa11.46□□□□□ -0.57
TMEM108-201ENST00000321871 SOGA1O94964 1423 aa11.44□□□□□ -0.58
TMEM108-201ENST00000321871 ABCC8Q09428 1581 aa11.41□□□□□ -0.58
TMEM108-201ENST00000321871 CCDC88BA6NC98 1476 aa11.4□□□□□ -0.58
TMEM108-201ENST00000321871 MYT1Q01538 1121 aa11.38□□□□□ -0.59
TMEM108-201ENST00000321871 WIZO95785 1651 aa11.37□□□□□ -0.59
TMEM108-201ENST00000321871 TNIKQ9UKE5 1360 aa11.32□□□□□ -0.6
TMEM108-201ENST00000321871 RUSC2Q8N2Y8 1516 aa11.32□□□□□ -0.6
TMEM108-201ENST00000321871 FAM50AQ14320 339 aaKnown RBP11.31□□□□□ -0.6
TMEM108-201ENST00000321871 NEFLP07196 543 aa11.3□□□□□ -0.6
TMEM108-201ENST00000321871 CLIP1P30622 1438 aa11.3□□□□□ -0.6
TMEM108-201ENST00000321871 HIRIP3Q9BW71 556 aaPredicted RBP11.3□□□□□ -0.6
TMEM108-201ENST00000321871 CNGB1Q14028 1251 aaPredicted RBP11.29□□□□□ -0.6
TMEM108-201ENST00000321871 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
TMEM108-201ENST00000321871 DDX10Q13206 875 aaKnown RBP11.25□□□□□ -0.61
TMEM108-201ENST00000321871 GOLGA3Q08378 1498 aa11.24□□□□□ -0.61
TMEM108-201ENST00000321871 WRNQ14191 1432 aaPredicted RBP eCLIP11.23□□□□□ -0.61
TMEM108-201ENST00000321871 FKBP8Q14318 412 aa11.21□□□□□ -0.61
TMEM108-201ENST00000321871 NACADO15069 1562 aa11.21□□□□□ -0.62
TMEM108-201ENST00000321871 TRIM52Q96A61 297 aa11.21□□□□□ -0.62
TMEM108-201ENST00000321871 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
TMEM108-201ENST00000321871 KANK4Q5T7N3 995 aaPredicted RBP11.19□□□□□ -0.62
TMEM108-201ENST00000321871 SUPT16HQ9Y5B9 1047 aaKnown RBP11.19□□□□□ -0.62
TMEM108-201ENST00000321871 ERICH6Q7L0X2 663 aa11.18□□□□□ -0.62
TMEM108-201ENST00000321871 KCNH8Q96L42 1107 aa11.17□□□□□ -0.62
TMEM108-201ENST00000321871 EEA1Q15075 1411 aa11.15□□□□□ -0.62
TMEM108-201ENST00000321871 POLR3GLQ9BT43 218 aa11.13□□□□□ -0.63
TMEM108-201ENST00000321871 SIN3AQ96ST3 1273 aa11.13□□□□□ -0.63
TMEM108-201ENST00000321871 CEP164Q9UPV0 1460 aa11.12□□□□□ -0.63
TMEM108-201ENST00000321871 ANP32CO43423 234 aa11.1□□□□□ -0.63
TMEM108-201ENST00000321871 IRX6P78412 446 aaPredicted RBP11.1□□□□□ -0.63
TMEM108-201ENST00000321871 VPS8Q8N3P4 1428 aa11.09□□□□□ -0.63
TMEM108-201ENST00000321871 ARID3CA6NKF2 412 aa11.08□□□□□ -0.64
TMEM108-201ENST00000321871 RAPGEF2Q9Y4G8 1499 aa11.07□□□□□ -0.64
TMEM108-201ENST00000321871 TOP2AP11388 1531 aaKnown RBP11.07□□□□□ -0.64
TMEM108-201ENST00000321871 TSHZ2Q9NRE2 1034 aa11.03□□□□□ -0.64
TMEM108-201ENST00000321871 SMARCA2P51531 1590 aa11.02□□□□□ -0.64
TMEM108-201ENST00000321871 DHX57Q6P158 1386 aaKnown RBP11.02□□□□□ -0.65
TMEM108-201ENST00000321871 HNRNPUQ00839 825 aaKnown RBP eCLIP11.02□□□□□ -0.65
TMEM108-201ENST00000321871 SENP3-EIF4A1A0A087X0R7 540 aa11.01□□□□□ -0.65
TMEM108-201ENST00000321871 SMARCA4P51532 1647 aa10.99□□□□□ -0.65
TMEM108-201ENST00000321871 BAZ1BQ9UIG0 1483 aaKnown RBP10.99□□□□□ -0.65
TMEM108-201ENST00000321871 CHIC2Q9UKJ5 165 aa10.98□□□□□ -0.65
TMEM108-201ENST00000321871 CCNB3Q8WWL7 1395 aa10.98□□□□□ -0.65
TMEM108-201ENST00000321871 ANP32EQ9BTT0 268 aa10.97□□□□□ -0.65
TMEM108-201ENST00000321871 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
TMEM108-201ENST00000321871 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.66
TMEM108-201ENST00000321871 TONSLQ96HA7 1378 aa10.96□□□□□ -0.66
TMEM108-201ENST00000321871 FAM9BQ8IZU0 186 aa10.95□□□□□ -0.66
TMEM108-201ENST00000321871 RAB3GAP2Q9H2M9 1393 aa10.94□□□□□ -0.66
TMEM108-201ENST00000321871 CDK11AQ9UQ88 783 aaPredicted RBP10.94□□□□□ -0.66
TMEM108-201ENST00000321871 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
TMEM108-201ENST00000321871 KIF27Q86VH2 1401 aa10.9□□□□□ -0.66
TMEM108-201ENST00000321871 RBM19Q9Y4C8 960 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms