RNA–Protein interactions for RNA: ENST00000324411.8

HKR1-201, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HKR1, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-201ENST00000324411 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
HKR1-201ENST00000324411 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
HKR1-201ENST00000324411 ZCCHC6Q5VYS8 1495 aaKnown RBP13.51□□□□□ -0.25
HKR1-201ENST00000324411 HRCP23327 699 aa13.5□□□□□ -0.25
HKR1-201ENST00000324411 PPARGC1BQ86YN6 1023 aaKnown RBP13.32□□□□□ -0.28
HKR1-201ENST00000324411 DCAF1Q9Y4B6 1507 aa13.27□□□□□ -0.29
HKR1-201ENST00000324411 SHROOM4Q9ULL8 1493 aa13.26□□□□□ -0.29
HKR1-201ENST00000324411 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
HKR1-201ENST00000324411 SUPT5HO00267 1087 aaKnown RBP13.24□□□□□ -0.29
HKR1-201ENST00000324411 DCAF8L2P0C7V8 631 aa13.13□□□□□ -0.31
HKR1-201ENST00000324411 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
HKR1-201ENST00000324411 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
HKR1-201ENST00000324411 CHIC1Q5VXU3 224 aa13□□□□□ -0.33
HKR1-201ENST00000324411 ABCC9O60706 1549 aa12.99□□□□□ -0.33
HKR1-201ENST00000324411 NACADO15069 1562 aa12.9□□□□□ -0.34
HKR1-201ENST00000324411 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
HKR1-201ENST00000324411 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
HKR1-201ENST00000324411 LOC105371045A0A1W2PR82 267 aa12.78□□□□□ -0.36
HKR1-201ENST00000324411 RB1CC1Q8TDY2 1594 aa12.75□□□□□ -0.37
HKR1-201ENST00000324411 TRIM26Q12899 539 aaPredicted RBP12.73□□□□□ -0.37
HKR1-201ENST00000324411 ZEB1P37275 1124 aaPredicted RBP12.61□□□□□ -0.39
HKR1-201ENST00000324411 MYT1Q01538 1121 aa12.54□□□□□ -0.4
HKR1-201ENST00000324411 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
HKR1-201ENST00000324411 RSF1Q96T23 1441 aaPredicted RBP12.51□□□□□ -0.41
HKR1-201ENST00000324411 ACIN1Q9UKV3 1341 aaKnown RBP12.49□□□□□ -0.41
HKR1-201ENST00000324411 NEUROD1Q13562 356 aa12.49□□□□□ -0.41
HKR1-201ENST00000324411 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.41
HKR1-201ENST00000324411 GTF3C3Q9Y5Q9 886 aa12.43□□□□□ -0.42
HKR1-201ENST00000324411 MROH2BQ7Z745 1585 aa12.41□□□□□ -0.42
HKR1-201ENST00000324411 BICRAQ9NZM4 1560 aa12.41□□□□□ -0.42
HKR1-201ENST00000324411 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
HKR1-201ENST00000324411 WIZO95785 1651 aa12.31□□□□□ -0.44
HKR1-201ENST00000324411 EHMT2Q96KQ7 1210 aa12.29□□□□□ -0.44
HKR1-201ENST00000324411 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
HKR1-201ENST00000324411 CENPBP07199 599 aaPredicted RBP12.29□□□□□ -0.44
HKR1-201ENST00000324411 PABPN1Q86U42 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
HKR1-201ENST00000324411 FAM9AQ8IZU1 332 aaPredicted RBP12.28□□□□□ -0.44
HKR1-201ENST00000324411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
HKR1-201ENST00000324411 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
HKR1-201ENST00000324411 CCER1Q8TC90 406 aaPredicted RBP12.21□□□□□ -0.45
HKR1-201ENST00000324411 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
HKR1-201ENST00000324411 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
HKR1-201ENST00000324411 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.46
HKR1-201ENST00000324411 YTHDC1Q96MU7 727 aaKnown RBP12.13□□□□□ -0.47
HKR1-201ENST00000324411 SMARCA2P51531 1590 aa12.08□□□□□ -0.48
HKR1-201ENST00000324411 EIF4G1Q04637 1599 aaKnown RBP12.07□□□□□ -0.48
HKR1-201ENST00000324411 CCDC88BA6NC98 1476 aa12.07□□□□□ -0.48
HKR1-201ENST00000324411 ATAD2BQ9ULI0 1458 aa12.05□□□□□ -0.48
HKR1-201ENST00000324411 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
HKR1-201ENST00000324411 ZNF316A6NFI3 1004 aaPredicted RBP11.97□□□□□ -0.49
HKR1-201ENST00000324411 BAZ1BQ9UIG0 1483 aaKnown RBP11.97□□□□□ -0.49
HKR1-201ENST00000324411 MIER1Q8N108 512 aa11.95□□□□□ -0.5
HKR1-201ENST00000324411 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
HKR1-201ENST00000324411 HMGXB3Q12766 1538 aa11.91□□□□□ -0.5
HKR1-201ENST00000324411 BCL11AQ9H165 835 aa11.86□□□□□ -0.51
HKR1-201ENST00000324411 ABCC8Q09428 1581 aa11.85□□□□□ -0.51
HKR1-201ENST00000324411 ANP32EQ9BTT0 268 aa11.8□□□□□ -0.52
HKR1-201ENST00000324411 SUPT16HQ9Y5B9 1047 aaKnown RBP11.79□□□□□ -0.52
HKR1-201ENST00000324411 CC2D2AQ9P2K1 1620 aa11.77□□□□□ -0.52
HKR1-201ENST00000324411 TSHZ2Q9NRE2 1034 aa11.76□□□□□ -0.53
HKR1-201ENST00000324411 WRNQ14191 1432 aaPredicted RBP eCLIP11.74□□□□□ -0.53
HKR1-201ENST00000324411 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
HKR1-201ENST00000324411 SYNJ1O43426 1573 aa11.72□□□□□ -0.53
HKR1-201ENST00000324411 CFTRP13569 1480 aa11.7□□□□□ -0.54
HKR1-201ENST00000324411 HNRNPUL2Q1KMD3 747 aaKnown RBP11.69□□□□□ -0.54
HKR1-201ENST00000324411 SOGA1O94964 1423 aa11.67□□□□□ -0.54
HKR1-201ENST00000324411 CEP162Q5TB80 1403 aa11.66□□□□□ -0.54
HKR1-201ENST00000324411 EEA1Q15075 1411 aa11.65□□□□□ -0.54
HKR1-201ENST00000324411 TOP2BQ02880 1626 aa11.65□□□□□ -0.55
HKR1-201ENST00000324411 PRDM2Q13029 1718 aa11.64□□□□□ -0.55
HKR1-201ENST00000324411 BIVM-ERCC5R4GMW8 1640 aa11.64□□□□□ -0.55
HKR1-201ENST00000324411 RUSC2Q8N2Y8 1516 aa11.63□□□□□ -0.55
HKR1-201ENST00000324411 CLSPNQ9HAW4 1339 aa11.63□□□□□ -0.55
HKR1-201ENST00000324411 CADPSQ9ULU8 1353 aa11.62□□□□□ -0.55
HKR1-201ENST00000324411 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
HKR1-201ENST00000324411 BCANQ96GW7 911 aa11.59□□□□□ -0.55
HKR1-201ENST00000324411 CUX1P39880 1505 aa11.59□□□□□ -0.55
HKR1-201ENST00000324411 UBTFP17480 764 aaKnown RBP11.58□□□□□ -0.56
HKR1-201ENST00000324411 TNIKQ9UKE5 1360 aa11.54□□□□□ -0.56
HKR1-201ENST00000324411 PRKCSHP14314 528 aaPredicted RBP11.53□□□□□ -0.56
HKR1-201ENST00000324411 KIF21BO75037 1637 aa11.51□□□□□ -0.57
HKR1-201ENST00000324411 KCNH8Q96L42 1107 aa11.51□□□□□ -0.57
HKR1-201ENST00000324411 GOLGA3Q08378 1498 aa11.5□□□□□ -0.57
HKR1-201ENST00000324411 DNAJC5BQ9UF47 199 aa11.5□□□□□ -0.57
HKR1-201ENST00000324411 CEP164Q9UPV0 1460 aa11.49□□□□□ -0.57
HKR1-201ENST00000324411 FKBP8Q14318 412 aa11.49□□□□□ -0.57
HKR1-201ENST00000324411 FANCD2Q9BXW9 1451 aa11.48□□□□□ -0.57
HKR1-201ENST00000324411 RBM19Q9Y4C8 960 aaKnown RBP11.48□□□□□ -0.57
HKR1-201ENST00000324411 LAMC3Q9Y6N6 1575 aa11.48□□□□□ -0.57
HKR1-201ENST00000324411 NESP48681 1621 aa11.47□□□□□ -0.57
HKR1-201ENST00000324411 KIF27Q86VH2 1401 aa11.43□□□□□ -0.58
HKR1-201ENST00000324411 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
HKR1-201ENST00000324411 RAPGEF2Q9Y4G8 1499 aa11.42□□□□□ -0.58
HKR1-201ENST00000324411 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
HKR1-201ENST00000324411 ITGAEP38570 1179 aa11.42□□□□□ -0.58
HKR1-201ENST00000324411 DNMBPQ6XZF7 1577 aa11.42□□□□□ -0.58
HKR1-201ENST00000324411 MSH5O43196 834 aa11.41□□□□□ -0.58
HKR1-201ENST00000324411 ERICH3Q5RHP9 1530 aa11.4□□□□□ -0.58
HKR1-201ENST00000324411 DHX57Q6P158 1386 aaKnown RBP11.39□□□□□ -0.59
HKR1-201ENST00000324411 TOPBP1Q92547 1522 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms