Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHB13Q9Y5F0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PCDHB13Q9Y5F0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB13Q9Y5F0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB13Q9Y5F0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHB13Q9Y5F0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.95■■□□□ 1.11
PCDHB13Q9Y5F0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHB13Q9Y5F0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 AL691432.2-201ENST00000607222 2038 ntBASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHB13Q9Y5F0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PCDHB13Q9Y5F0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 AC006557.6-201ENST00000623071 864 ntBASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB13Q9Y5F0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 AFG3L1P-217ENST00000557444 2447 ntBASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHB13Q9Y5F0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 KRT18P6-201ENST00000555540 1265 ntBASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms