Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF31Q96EP0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF31Q96EP0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF31Q96EP0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF31Q96EP0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF31Q96EP0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF31Q96EP0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF31Q96EP0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF31Q96EP0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF31Q96EP0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF31Q96EP0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF31Q96EP0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF31Q96EP0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF31Q96EP0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF31Q96EP0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF31Q96EP0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF31Q96EP0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF31Q96EP0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF31Q96EP0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF31Q96EP0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF31Q96EP0 MIR4497-201ENST00000583208 89 ntBASIC19.16■□□□□ 0.66
RNF31Q96EP0 MIR2861-201ENST00000636310 90 ntBASIC19.16■□□□□ 0.66
RNF31Q96EP0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF31Q96EP0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF31Q96EP0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RNF31Q96EP0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF31Q96EP0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF31Q96EP0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF31Q96EP0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RNF31Q96EP0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF31Q96EP0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF31Q96EP0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF31Q96EP0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RNF31Q96EP0 MIR718-201ENST00000390190 70 ntBASIC19.15■□□□□ 0.66
RNF31Q96EP0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF31Q96EP0 ECEL1P3-201ENST00000427961 737 ntBASIC19.15■□□□□ 0.66
RNF31Q96EP0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF31Q96EP0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF31Q96EP0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF31Q96EP0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
RNF31Q96EP0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF31Q96EP0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF31Q96EP0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF31Q96EP0 AC007952.6-201ENST00000573168 2673 ntBASIC19.15■□□□□ 0.66
RNF31Q96EP0 AC003957.1-201ENST00000625108 2673 ntBASIC19.15■□□□□ 0.66
RNF31Q96EP0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF31Q96EP0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.14■□□□□ 0.66
RNF31Q96EP0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
RNF31Q96EP0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF31Q96EP0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF31Q96EP0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF31Q96EP0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF31Q96EP0 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.14■□□□□ 0.65
RNF31Q96EP0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF31Q96EP0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF31Q96EP0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF31Q96EP0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF31Q96EP0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF31Q96EP0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF31Q96EP0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF31Q96EP0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RNF31Q96EP0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF31Q96EP0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF31Q96EP0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RNF31Q96EP0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF31Q96EP0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF31Q96EP0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF31Q96EP0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF31Q96EP0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF31Q96EP0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF31Q96EP0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF31Q96EP0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF31Q96EP0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF31Q96EP0 KRT8P36-201ENST00000489121 1440 ntBASIC19.13■□□□□ 0.65
RNF31Q96EP0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF31Q96EP0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF31Q96EP0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF31Q96EP0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF31Q96EP0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF31Q96EP0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF31Q96EP0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF31Q96EP0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF31Q96EP0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF31Q96EP0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF31Q96EP0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF31Q96EP0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF31Q96EP0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF31Q96EP0 AIRN-201ENST00000601203 4374 ntBASIC19.12■□□□□ 0.65
RNF31Q96EP0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms