Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 RAB11A-207ENST00000568850 551 ntTSL 412.19□□□□□ -0.461e-14■■■□□ 15.2
SND1Q7KZF4 PLA2G2A-204ENST00000469162 871 ntTSL 316.82■□□□□ 0.282e-6■■■□□ 15.2
SND1Q7KZF4 PLA2G2A-207ENST00000496748 1306 ntTSL 513.06□□□□□ -0.322e-6■■■□□ 15.2
SND1Q7KZF4 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.322e-6■■■□□ 15.2
SND1Q7KZF4 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.532e-6■■■□□ 15.2
SND1Q7KZF4 PLA2G2A-205ENST00000482011 735 ntTSL 1 (best)11.73□□□□□ -0.532e-6■■■□□ 15.2
SND1Q7KZF4 PLA2G2A-206ENST00000491964 903 ntTSL 310.54□□□□□ -0.722e-6■■■□□ 15.2
SND1Q7KZF4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.435e-7■■■□□ 15.2
SND1Q7KZF4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.955e-7■■■□□ 15.2
SND1Q7KZF4 CIDEB-206ENST00000556756 248 ntTSL 510.7□□□□□ -0.75e-7■■■□□ 15.2
SND1Q7KZF4 CIDEB-203ENST00000554411 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.765e-7■■■□□ 15.2
SND1Q7KZF4 C4BPB-208ENST00000492730 564 ntTSL 46.24□□□□□ -1.412e-7■■■□□ 15.2
SND1Q7KZF4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.563e-7■■■□□ 15.2
SND1Q7KZF4 PTK7-208ENST00000470019 4016 ntTSL 516.18■□□□□ 0.183e-7■■■□□ 15.2
SND1Q7KZF4 PTK7-201ENST00000230418 3958 ntTSL 1 (best)15.84■□□□□ 0.133e-7■■■□□ 15.2
SND1Q7KZF4 PTK7-215ENST00000487673 5282 ntTSL 215.63■□□□□ 0.093e-7■■■□□ 15.2
SND1Q7KZF4 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC15.56■□□□□ 0.083e-7■■■□□ 15.2
SND1Q7KZF4 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC15.34■□□□□ 0.053e-7■■■□□ 15.2
SND1Q7KZF4 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC14.39□□□□□ -0.113e-7■■■□□ 15.2
SND1Q7KZF4 PTK7-213ENST00000481273 3436 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.443e-7■■■□□ 15.2
SND1Q7KZF4 DDB1-208ENST00000537120 1215 ntTSL 28.68□□□□□ -1.022e-7■■■□□ 15.2
SND1Q7KZF4 ATAD1-203ENST00000495903 671 ntTSL 38.42□□□□□ -1.061e-7■■■□□ 15.2
SND1Q7KZF4 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.187e-7■■■□□ 15.2
SND1Q7KZF4 NT5E-203ENST00000369651 3918 ntTSL 2 BASIC12.76□□□□□ -0.377e-7■■■□□ 15.2
SND1Q7KZF4 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC9.25□□□□□ -0.932e-6■■■□□ 15.2
SND1Q7KZF4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.22e-6■■■□□ 15.2
SND1Q7KZF4 SEPT5-212ENST00000470814 2353 ntTSL 521.4■■□□□ 1.022e-16■■■□□ 15.2
SND1Q7KZF4 SEPT5-211ENST00000455843 4113 ntTSL 1 (best)16.35■□□□□ 0.212e-16■■■□□ 15.2
SND1Q7KZF4 RHCE-210ENST00000533771 581 ntTSL 316.33■□□□□ 0.22e-9■■■□□ 15.2
SND1Q7KZF4 RHCE-208ENST00000527187 1441 ntTSL 1 (best)15.88■□□□□ 0.132e-9■■■□□ 15.2
SND1Q7KZF4 C2-217ENST00000497706 1609 ntTSL 515.55■□□□□ 0.082e-10■■■□□ 15.2
SND1Q7KZF4 GUSB-204ENST00000446111 933 ntTSL 1 (best)24.41■■□□□ 1.52e-6■■■□□ 15.2
SND1Q7KZF4 RARRES2-204ENST00000478771 1907 ntTSL 223.33■■□□□ 1.337e-7■■■□□ 15.2
SND1Q7KZF4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.087e-7■■■□□ 15.2
SND1Q7KZF4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.087e-7■■■□□ 15.2
SND1Q7KZF4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.687e-7■■■□□ 15.2
SND1Q7KZF4 RARRES2-203ENST00000467793 583 ntTSL 316.51■□□□□ 0.237e-7■■■□□ 15.2
SND1Q7KZF4 SC5D-206ENST00000528991 346 ntTSL 35.63□□□□□ -1.511e-6■■■□□ 15.2
SND1Q7KZF4 ADAM10-208ENST00000475898 674 ntTSL 410.01□□□□□ -0.818e-7■■■□□ 15.1
SND1Q7KZF4 ADAM10-209ENST00000481164 750 ntTSL 37.8□□□□□ -1.168e-7■■■□□ 15.1
SND1Q7KZF4 WARS-207ENST00000553524 707 ntTSL 320.79■□□□□ 0.925e-7■■■□□ 15.1
SND1Q7KZF4 WARS-239ENST00000557239 471 ntTSL 417.63■□□□□ 0.415e-7■■■□□ 15.1
SND1Q7KZF4 WARS-235ENST00000556698 640 ntTSL 410.78□□□□□ -0.685e-7■■■□□ 15.1
SND1Q7KZF4 CPE-204ENST00000511992 563 ntTSL 58.14□□□□□ -1.112e-8■■■□□ 15.1
SND1Q7KZF4 KCNN4-208ENST00000601549 1093 ntTSL 318.94■□□□□ 0.621e-6■■■□□ 15.1
SND1Q7KZF4 KCNN4-206ENST00000600408 648 ntTSL 218.17■□□□□ 0.51e-6■■■□□ 15.1
SND1Q7KZF4 FGG-206ENST00000443553 789 ntTSL 59.55□□□□□ -0.885e-32■■■□□ 15.1
SND1Q7KZF4 ERGIC3-219ENST00000496172 781 ntTSL 210.84□□□□□ -0.672e-8■■■□□ 15.1
SND1Q7KZF4 KRT19-202ENST00000455635 641 ntTSL 319.62■□□□□ 0.732e-10■■■□□ 15.1
SND1Q7KZF4 PTDSS1-201ENST00000337004 2366 ntTSL 1 (best)23.73■■□□□ 1.393e-6■■■□□ 15.1
SND1Q7KZF4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.653e-6■■■□□ 15.1
SND1Q7KZF4 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC12.22□□□□□ -0.453e-6■■■□□ 15.1
SND1Q7KZF4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.22■□□□□ 0.677e-7■■■□□ 15.1
SND1Q7KZF4 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC13.26□□□□□ -0.292e-6■■■□□ 15.1
SND1Q7KZF4 PSAT1-202ENST00000376588 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.432e-6■■■□□ 15.1
SND1Q7KZF4 TF-209ENST00000475382 586 ntTSL 49.57□□□□□ -0.882e-19■■■□□ 15.1
SND1Q7KZF4 TF-214ENST00000498622 719 ntTSL 28.44□□□□□ -1.062e-19■■■□□ 15.1
SND1Q7KZF4 SLC6A6-201ENST00000452151 284 ntTSL 57.3□□□□□ -1.242e-7■■■□□ 15.1
SND1Q7KZF4 COL9A3-202ENST00000452372 596 ntTSL 520.66■□□□□ 0.99e-18■■■□□ 15.1
SND1Q7KZF4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.544e-7■■■□□ 15.1
SND1Q7KZF4 UQCRC1-203ENST00000415995 1387 ntTSL 516.69■□□□□ 0.264e-7■■■□□ 15.1
SND1Q7KZF4 UQCRC1-204ENST00000460105 622 ntTSL 215.64■□□□□ 0.094e-7■■■□□ 15.1
SND1Q7KZF4 UQCRC1-207ENST00000471189 955 ntTSL 313.66□□□□□ -0.224e-7■■■□□ 15.1
SND1Q7KZF4 CBX3-206ENST00000481057 860 ntTSL 210.79□□□□□ -0.685e-6■■■□□ 15.1
SND1Q7KZF4 ACTR3-205ENST00000478928 5965 ntTSL 23.19□□□□□ -1.94e-8■■■□□ 15.1
SND1Q7KZF4 P4HB-217ENST00000573778 688 ntTSL 520.82■□□□□ 0.922e-22■■■□□ 15.1
SND1Q7KZF4 P4HB-218ENST00000574007 1053 ntTSL 214.41□□□□□ -0.12e-22■■■□□ 15.1
SND1Q7KZF4 HSPA8-213ENST00000530391 648 ntTSL 321.44■■□□□ 1.029e-22■■■□□ 15.1
SND1Q7KZF4 HSPA8-219ENST00000532780 1194 ntTSL 218.63■□□□□ 0.572e-21■■■□□ 15.1
SND1Q7KZF4 HSPA8-210ENST00000527387 579 ntTSL 414.15□□□□□ -0.148e-22■■■□□ 15.1
SND1Q7KZF4 HSPA8-206ENST00000525624 1048 ntTSL 513.99□□□□□ -0.178e-22■■■□□ 15.1
SND1Q7KZF4 HSPA8-217ENST00000532182 674 ntTSL 411.61□□□□□ -0.559e-22■■■□□ 15.1
SND1Q7KZF4 HSPA8-216ENST00000532167 570 ntTSL 49.46□□□□□ -0.91e-21■■■□□ 15.1
SND1Q7KZF4 HSPA8-205ENST00000525463 583 ntTSL 56.89□□□□□ -1.311e-21■■■□□ 15.1
SND1Q7KZF4 HSPA8-204ENST00000524590 536 ntTSL 55.16□□□□□ -1.589e-22■■■□□ 15.1
SND1Q7KZF4 HSPA8-223ENST00000534567 588 ntTSL 44.72□□□□□ -1.658e-22■■■□□ 15.1
SND1Q7KZF4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.451e-7■■■□□ 15.1
SND1Q7KZF4 LMNB1-203ENST00000460265 3475 ntTSL 1 (best)16.81■□□□□ 0.281e-7■■■□□ 15.1
SND1Q7KZF4 LMNB1-208ENST00000504788 1801 ntTSL 25.07□□□□□ -1.61e-7■■■□□ 15.1
SND1Q7KZF4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.183e-6■■■□□ 15.1
SND1Q7KZF4 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.133e-6■■■□□ 15.1
SND1Q7KZF4 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.983e-6■■■□□ 15.1
SND1Q7KZF4 HBP1-214ENST00000498408 2332 ntTSL 27.1□□□□□ -1.273e-6■■■□□ 15.1
SND1Q7KZF4 HBP1-211ENST00000483809 582 ntTSL 27.05□□□□□ -1.283e-6■■■□□ 15.1
SND1Q7KZF4 HBP1-203ENST00000463202 2646 ntTSL 1 (best)5.58□□□□□ -1.523e-6■■■□□ 15.1
SND1Q7KZF4 HBP1-202ENST00000461963 581 ntTSL 55.08□□□□□ -1.63e-6■■■□□ 15.1
SND1Q7KZF4 FXYD5-206ENST00000496493 729 ntTSL 312.87□□□□□ -0.353e-12■■■□□ 15.1
SND1Q7KZF4 FXYD5-213ENST00000592290 883 ntTSL 37.82□□□□□ -1.163e-12■■■□□ 15.1
SND1Q7KZF4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.62■□□□□ 0.574e-8■■■□□ 15.1
SND1Q7KZF4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.284e-8■■■□□ 15.1
SND1Q7KZF4 SLC43A3-217ENST00000530005 1434 ntTSL 1 (best)19.96■□□□□ 0.794e-10■■■□□ 15
SND1Q7KZF4 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.853e-7■■■□□ 15
SND1Q7KZF4 KIAA1161-202ENST00000379142 480 ntTSL 518.82■□□□□ 0.63e-10■■■□□ 15
SND1Q7KZF4 ILVBL-204ENST00000527093 1090 ntTSL 1 (best)19.62■□□□□ 0.732e-7■■■□□ 15
SND1Q7KZF4 PROC-202ENST00000402125 779 ntTSL 219.15■□□□□ 0.662e-12■■■□□ 15
SND1Q7KZF4 SLC37A4-215ENST00000534384 554 ntTSL 415.23■□□□□ 0.031e-9■■■□□ 15
SND1Q7KZF4 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC8.58□□□□□ -1.048e-8■■■□□ 15
SND1Q7KZF4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.84■□□□□ 0.612e-8■■■□□ 15
SND1Q7KZF4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.192e-8■■■□□ 15
SND1Q7KZF4 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.082e-8■■■□□ 15
Retrieved 100 of 13,567 protein–RNA pairs in 132.6 ms