RNA–Protein interactions for RNA: ENST00000600408.1

KCNN4-206, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 2

Gene KCNN4, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-206ENST00000600408 NISCHQ9Y2I1 1504 aa41.79■■■■■ 4.28
KCNN4-206ENST00000600408 CCDC180Q9P1Z9 1646 aa37.09■■■■□ 3.53
KCNN4-206ENST00000600408 ABCC9O60706 1549 aa35.99■■■■□ 3.35
KCNN4-206ENST00000600408 ZCCHC6Q5VYS8 1495 aaKnown RBP34.86■■■■□ 3.17
KCNN4-206ENST00000600408 NACADO15069 1562 aa34.83■■■■□ 3.17
KCNN4-206ENST00000600408 DCAF8L2P0C7V8 631 aa34.82■■■■□ 3.16
KCNN4-206ENST00000600408 RB1CC1Q8TDY2 1594 aa34.81■■■■□ 3.16
KCNN4-206ENST00000600408 MYO15BQ96JP2 1530 aa34.71■■■■□ 3.15
KCNN4-206ENST00000600408 DCAF1Q9Y4B6 1507 aa34.63■■■■□ 3.13
KCNN4-206ENST00000600408 UNC13AQ9UPW8 1703 aa33.89■■■■□ 3.02
KCNN4-206ENST00000600408 SCRIBQ14160 1630 aa33.8■■■■□ 3
KCNN4-206ENST00000600408 PABPN1Q86U42 306 aaKnown RBP eCLIP33.64■■■□□ 2.98
KCNN4-206ENST00000600408 BICRAQ9NZM4 1560 aa33.63■■■□□ 2.97
KCNN4-206ENST00000600408 SHROOM4Q9ULL8 1493 aa33.48■■■□□ 2.95
KCNN4-206ENST00000600408 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
KCNN4-206ENST00000600408 DNAJC5BQ9UF47 199 aa32.7■■■□□ 2.83
KCNN4-206ENST00000600408 CC2D2AQ9P2K1 1620 aa32.57■■■□□ 2.8
KCNN4-206ENST00000600408 CECR2Q9BXF3 1484 aa32.45■■■□□ 2.79
KCNN4-206ENST00000600408 BAZ1AQ9NRL2 1556 aaPredicted RBP32.42■■■□□ 2.78
KCNN4-206ENST00000600408 SMARCA4P51532 1647 aa32.37■■■□□ 2.77
KCNN4-206ENST00000600408 SMARCA2P51531 1590 aa32.18■■■□□ 2.74
KCNN4-206ENST00000600408 MROH2BQ7Z745 1585 aa32.16■■■□□ 2.74
KCNN4-206ENST00000600408 ATAD2BQ9ULI0 1458 aa32.13■■■□□ 2.73
KCNN4-206ENST00000600408 NCAPD3P42695 1498 aa32.1■■■□□ 2.73
KCNN4-206ENST00000600408 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.72
KCNN4-206ENST00000600408 HMGXB3Q12766 1538 aa31.99■■■□□ 2.71
KCNN4-206ENST00000600408 BAZ1BQ9UIG0 1483 aaKnown RBP31.93■■■□□ 2.7
KCNN4-206ENST00000600408 RSF1Q96T23 1441 aaPredicted RBP31.91■■■□□ 2.7
KCNN4-206ENST00000600408 WIZO95785 1651 aa31.82■■■□□ 2.68
KCNN4-206ENST00000600408 TOP2AP11388 1531 aaKnown RBP31.57■■■□□ 2.64
KCNN4-206ENST00000600408 SUPT5HO00267 1087 aaKnown RBP31.29■■■□□ 2.6
KCNN4-206ENST00000600408 LAMC3Q9Y6N6 1575 aa31.25■■■□□ 2.59
KCNN4-206ENST00000600408 CADPSQ9ULU8 1353 aa31.18■■■□□ 2.58
KCNN4-206ENST00000600408 NESP48681 1621 aa31.17■■■□□ 2.58
KCNN4-206ENST00000600408 CCDC88BA6NC98 1476 aa31.15■■■□□ 2.58
KCNN4-206ENST00000600408 ERCC6Q03468 1493 aa31.08■■■□□ 2.57
KCNN4-206ENST00000600408 PDS5BQ9NTI5 1447 aa31.06■■■□□ 2.56
KCNN4-206ENST00000600408 CFTRP13569 1480 aa31.04■■■□□ 2.56
KCNN4-206ENST00000600408 KIF21AQ7Z4S6 1674 aa30.84■■■□□ 2.53
KCNN4-206ENST00000600408 FANCD2Q9BXW9 1451 aa30.82■■■□□ 2.53
KCNN4-206ENST00000600408 PRDM2Q13029 1718 aa30.82■■■□□ 2.52
KCNN4-206ENST00000600408 CEP164Q9UPV0 1460 aa30.79■■■□□ 2.52
KCNN4-206ENST00000600408 THOC2Q8NI27 1593 aaKnown RBP30.69■■■□□ 2.5
KCNN4-206ENST00000600408 MRC2Q9UBG0 1479 aa30.69■■■□□ 2.5
KCNN4-206ENST00000600408 CUX2O14529 1486 aa30.67■■■□□ 2.5
KCNN4-206ENST00000600408 WDR62O43379 1518 aa30.56■■■□□ 2.48
KCNN4-206ENST00000600408 URB2Q14146 1524 aaKnown RBP30.45■■■□□ 2.47
KCNN4-206ENST00000600408 ABCC8Q09428 1581 aa30.45■■■□□ 2.46
KCNN4-206ENST00000600408 DNMBPQ6XZF7 1577 aa30.35■■■□□ 2.45
KCNN4-206ENST00000600408 TOPBP1Q92547 1522 aa30.34■■■□□ 2.45
KCNN4-206ENST00000600408 CUX1P39880 1505 aa30.18■■■□□ 2.42
KCNN4-206ENST00000600408 IFT140Q96RY7 1462 aa30.14■■■□□ 2.42
KCNN4-206ENST00000600408 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
KCNN4-206ENST00000600408 POLA1P09884 1462 aaPredicted RBP30.09■■■□□ 2.41
KCNN4-206ENST00000600408 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
KCNN4-206ENST00000600408 TOP2BQ02880 1626 aa30.02■■■□□ 2.4
KCNN4-206ENST00000600408 BIVM-ERCC5R4GMW8 1640 aa30■■■□□ 2.39
KCNN4-206ENST00000600408 SOGA1O94964 1423 aa30■■■□□ 2.39
KCNN4-206ENST00000600408 SYNJ1O43426 1573 aa29.98■■■□□ 2.39
KCNN4-206ENST00000600408 TARBP1Q13395 1621 aaKnown RBP29.96■■■□□ 2.39
KCNN4-206ENST00000600408 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
KCNN4-206ENST00000600408 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
KCNN4-206ENST00000600408 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
KCNN4-206ENST00000600408 EIF4G3O43432 1585 aaKnown RBP29.83■■■□□ 2.37
KCNN4-206ENST00000600408 ABCA10Q8WWZ4 1543 aa29.81■■■□□ 2.36
KCNN4-206ENST00000600408 AQRO60306 1485 aaKnown RBP eCLIP29.76■■■□□ 2.358e-7■■■□□ 17
KCNN4-206ENST00000600408 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.35
KCNN4-206ENST00000600408 GAPVD1Q14C86 1478 aa29.67■■■□□ 2.34
KCNN4-206ENST00000600408 ABCA5Q8WWZ7 1642 aa29.64■■■□□ 2.34
KCNN4-206ENST00000600408 GRIN2BQ13224 1484 aa29.64■■■□□ 2.34
KCNN4-206ENST00000600408 TRIM41Q8WV44 630 aa29.6■■■□□ 2.33
KCNN4-206ENST00000600408 PBRM1Q86U86 1689 aa29.56■■■□□ 2.32
KCNN4-206ENST00000600408 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
KCNN4-206ENST00000600408 SNAPC4Q5SXM2 1469 aa29.54■■■□□ 2.32
KCNN4-206ENST00000600408 KIF27Q86VH2 1401 aa29.52■■■□□ 2.32
KCNN4-206ENST00000600408 ERICH3Q5RHP9 1530 aa29.48■■■□□ 2.31
KCNN4-206ENST00000600408 OSCARQ8IYS5 282 aa29.44■■■□□ 2.3
KCNN4-206ENST00000600408 SYNJ2O15056 1496 aa29.42■■■□□ 2.3
KCNN4-206ENST00000600408 FBLN2P98095 1184 aa29.42■■■□□ 2.3
KCNN4-206ENST00000600408 CHMP7Q8WUX9 453 aaPredicted RBP29.4■■■□□ 2.3
KCNN4-206ENST00000600408 CHD1O14646 1710 aa29.38■■■□□ 2.29
KCNN4-206ENST00000600408 DNAJC5Q9H3Z4 198 aa29.38■■■□□ 2.29
KCNN4-206ENST00000600408 ADAMTS12P58397 1594 aa29.35■■■□□ 2.29
KCNN4-206ENST00000600408 FHAD1B1AJZ9 1412 aa29.35■■■□□ 2.29
KCNN4-206ENST00000600408 CHIC1Q5VXU3 224 aa29.31■■■□□ 2.28
KCNN4-206ENST00000600408 IGF1RP08069 1367 aa29.28■■■□□ 2.28
KCNN4-206ENST00000600408 CUL7Q14999 1698 aa29.27■■■□□ 2.28
KCNN4-206ENST00000600408 GRIN2AQ12879 1464 aa29.24■■■□□ 2.27
KCNN4-206ENST00000600408 RUSC2Q8N2Y8 1516 aa29.17■■■□□ 2.26
KCNN4-206ENST00000600408 CARMIL1Q5VZK9 1371 aa29.16■■■□□ 2.26
KCNN4-206ENST00000600408 EEA1Q15075 1411 aa29.14■■■□□ 2.26
KCNN4-206ENST00000600408 NUP160Q12769 1436 aa29.1■■■□□ 2.25
KCNN4-206ENST00000600408 CLASP1Q7Z460 1538 aa29.09■■■□□ 2.25
KCNN4-206ENST00000600408 CEP170Q5SW79 1584 aa29.04■■■□□ 2.24
KCNN4-206ENST00000600408 RAPGEF2Q9Y4G8 1499 aa29.03■■■□□ 2.24
KCNN4-206ENST00000600408 CSRNP3Q8WYN3 585 aa29■■■□□ 2.23
KCNN4-206ENST00000600408 PRXQ9BXM0 1461 aa28.95■■■□□ 2.22
KCNN4-206ENST00000600408 ARHGEF11O15085 1522 aa28.91■■■□□ 2.22
KCNN4-206ENST00000600408 KIAA0586Q9BVV6 1533 aa28.9■■■□□ 2.22
KCNN4-206ENST00000600408 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms