RNA–Protein interactions for RNA: ENST00000483809.1

HBP1-211, Transcript of HMG-box transcription factor 1, human

TSL 2

Gene HBP1, Length 582 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HBP1-211	ENST00000483809	AEBP2	Q6ZN18	517 aa	Predicted RBP	21.08	■□□□□ 0.97
HBP1-211	ENST00000483809	CHIC1	Q5VXU3	224 aa		20.18	■□□□□ 0.82
HBP1-211	ENST00000483809	SENP3	Q9H4L4	574 aa	Predicted RBP	17.93	■□□□□ 0.46
HBP1-211	ENST00000483809	PHF23	Q9BUL5	403 aa	Predicted RBP	17.72	■□□□□ 0.43
HBP1-211	ENST00000483809	FOXD1	Q16676	465 aa		16.7	■□□□□ 0.26
HBP1-211	ENST00000483809	PLPPR3	Q6T4P5	718 aa		16.39	■□□□□ 0.21
HBP1-211	ENST00000483809	PPP6R1	Q9UPN7	881 aa		15.76	■□□□□ 0.11
HBP1-211	ENST00000483809	ADRA2B	P18089	450 aa		15.72	■□□□□ 0.11
HBP1-211	ENST00000483809	PIAS4	Q8N2W9	510 aa	Predicted RBP	15.65	■□□□□ 0.1
HBP1-211	ENST00000483809	MSH5	O43196	834 aa		15.54	■□□□□ 0.08
HBP1-211	ENST00000483809	POTED	Q86YR6	584 aa		14.87	□□□□□ -0.03
HBP1-211	ENST00000483809	PPP4R3CP	Q6ZMV5	832 aa		14.42	□□□□□ -0.1
HBP1-211	ENST00000483809	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.38	□□□□□ -0.11
HBP1-211	ENST00000483809	SCAF1	Q9H7N4	1312 aa	Known RBP	14.35	□□□□□ -0.11
HBP1-211	ENST00000483809	DMRT2	Q9Y5R5	561 aa		14.25	□□□□□ -0.13
HBP1-211	ENST00000483809	KCNA4	P22459	653 aa		14.17	□□□□□ -0.14
HBP1-211	ENST00000483809	NCBP3	Q53F19	620 aa	Known RBP	14.09	□□□□□ -0.15
HBP1-211	ENST00000483809	CNKSR2	Q8WXI2	1034 aa		14.04	□□□□□ -0.16
HBP1-211	ENST00000483809	NPM3	O75607	178 aa	Known RBP	13.88	□□□□□ -0.19
HBP1-211	ENST00000483809	HOXD11	P31277	338 aa	Predicted RBP	13.8	□□□□□ -0.2
HBP1-211	ENST00000483809	RNF216	Q9NWF9	866 aa	Predicted RBP	13.76	□□□□□ -0.21
HBP1-211	ENST00000483809	DNAJC5B	Q9UF47	199 aa		13.65	□□□□□ -0.22
HBP1-211	ENST00000483809	DCAF8L1	A6NGE4	600 aa		13.64	□□□□□ -0.23
HBP1-211	ENST00000483809	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.51	□□□□□ -0.25
HBP1-211	ENST00000483809	RNF39	Q9H2S5	420 aa		13.29	□□□□□ -0.28
HBP1-211	ENST00000483809	CACNB1	Q02641	598 aa	Predicted RBP	13.22	□□□□□ -0.29
HBP1-211	ENST00000483809	EHMT2	Q96KQ7	1210 aa		13.14	□□□□□ -0.31
HBP1-211	ENST00000483809	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.13	□□□□□ -0.31	1e-6	■■□□□ 11.9
HBP1-211	ENST00000483809	SLC4A2	P04920	1241 aa		13.09	□□□□□ -0.31
HBP1-211	ENST00000483809	C1QBP	Q07021	282 aa	Known RBP	13.09	□□□□□ -0.31
HBP1-211	ENST00000483809	CSRNP3	Q8WYN3	585 aa		13.06	□□□□□ -0.32
HBP1-211	ENST00000483809	FOXD4L1	Q9NU39	408 aa		13.06	□□□□□ -0.32
HBP1-211	ENST00000483809	ZBTB22	O15209	634 aa		13.05	□□□□□ -0.32
HBP1-211	ENST00000483809		U3KPZ7	1027 aa	Predicted RBP	12.91	□□□□□ -0.34
HBP1-211	ENST00000483809	MYCN	P04198	464 aa	Predicted RBP	12.84	□□□□□ -0.35
HBP1-211	ENST00000483809	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.7	□□□□□ -0.38
HBP1-211	ENST00000483809	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.7	□□□□□ -0.38
HBP1-211	ENST00000483809	ATXN8OS	P0DMR3	200 aa		12.66	□□□□□ -0.38
HBP1-211	ENST00000483809	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.66	□□□□□ -0.38
HBP1-211	ENST00000483809	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.65	□□□□□ -0.38
HBP1-211	ENST00000483809	CAPN15	O75808	1086 aa		12.61	□□□□□ -0.39
HBP1-211	ENST00000483809	APLP2	Q06481	763 aa		12.55	□□□□□ -0.4
HBP1-211	ENST00000483809	DSG3	P32926	999 aa		12.5	□□□□□ -0.41
HBP1-211	ENST00000483809	TRH	P20396	242 aa	Predicted RBP	12.46	□□□□□ -0.41
HBP1-211	ENST00000483809	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.43	□□□□□ -0.42
HBP1-211	ENST00000483809	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.43	□□□□□ -0.42
HBP1-211	ENST00000483809	ABCB7	O75027	752 aa		12.36	□□□□□ -0.43
HBP1-211	ENST00000483809	POLA2	Q14181	598 aa		12.17	□□□□□ -0.46
HBP1-211	ENST00000483809	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.99	□□□□□ -0.49
HBP1-211	ENST00000483809	MKRN4P	Q13434	485 aa	Predicted RBP	11.93	□□□□□ -0.5
HBP1-211	ENST00000483809	FBLN2	P98095	1184 aa		11.91	□□□□□ -0.5
HBP1-211	ENST00000483809	RBM42	Q9BTD8	480 aa	Known RBP	11.91	□□□□□ -0.5
HBP1-211	ENST00000483809	OSCAR	Q8IYS5	282 aa		11.79	□□□□□ -0.52
HBP1-211	ENST00000483809	FKBP8	Q14318	412 aa		11.75	□□□□□ -0.53
HBP1-211	ENST00000483809	SPDYE4	A6NLX3	237 aa		11.68	□□□□□ -0.54
HBP1-211	ENST00000483809	POTEH	Q6S545	545 aa		11.68	□□□□□ -0.54
HBP1-211	ENST00000483809	AKT1S1	Q96B36	256 aa		11.68	□□□□□ -0.54
HBP1-211	ENST00000483809	SPDYE2B	A6NHP3	402 aa		11.66	□□□□□ -0.54
HBP1-211	ENST00000483809	SPDYE6	P0CI01	402 aa		11.66	□□□□□ -0.54
HBP1-211	ENST00000483809	SPDYE2	Q495Y8	402 aa		11.66	□□□□□ -0.54
HBP1-211	ENST00000483809	PROM2	Q8N271	834 aa		11.63	□□□□□ -0.55
HBP1-211	ENST00000483809	SSUH2	Q9Y2M2	353 aa		11.61	□□□□□ -0.55
HBP1-211	ENST00000483809	CHRDL2	Q6WN34	429 aa		11.59	□□□□□ -0.55
HBP1-211	ENST00000483809	REM2	Q8IYK8	340 aa	Predicted RBP	11.58	□□□□□ -0.56
HBP1-211	ENST00000483809	ZNF692	Q9BU19	519 aa	Predicted RBP	11.56	□□□□□ -0.56
HBP1-211	ENST00000483809	PITPNM1	O00562	1244 aa		11.47	□□□□□ -0.57
HBP1-211	ENST00000483809	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
HBP1-211	ENST00000483809	FBXO3	Q9UK99	471 aa		11.38	□□□□□ -0.59
HBP1-211	ENST00000483809	PIP4P2	Q8N4L2	257 aa		11.36	□□□□□ -0.59
HBP1-211	ENST00000483809	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.33	□□□□□ -0.6
HBP1-211	ENST00000483809	FXR2	P51116	673 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
HBP1-211	ENST00000483809	STAG3	Q9UJ98	1225 aa		11.31	□□□□□ -0.6
HBP1-211	ENST00000483809	CLEC11A	Q9Y240	323 aa		11.3	□□□□□ -0.6
HBP1-211	ENST00000483809	VASP	P50552	380 aa	Predicted RBP	11.19	□□□□□ -0.62
HBP1-211	ENST00000483809	PRKAR2A	P13861	404 aa	Known RBP	11.16	□□□□□ -0.62
HBP1-211	ENST00000483809	PRR29	P0C7W0	189 aa		11.13	□□□□□ -0.63
HBP1-211	ENST00000483809	HAX1	O00165	279 aa		11.09	□□□□□ -0.63
HBP1-211	ENST00000483809	CHADL	Q6NUI6	762 aa		11.08	□□□□□ -0.64
HBP1-211	ENST00000483809	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.04	□□□□□ -0.64
HBP1-211	ENST00000483809	SP7	Q8TDD2	431 aa	Predicted RBP	11.04	□□□□□ -0.64
HBP1-211	ENST00000483809	MIER1	Q8N108	512 aa		11.02	□□□□□ -0.65
HBP1-211	ENST00000483809	PLCD3	Q8N3E9	789 aa		11.01	□□□□□ -0.65
HBP1-211	ENST00000483809	CREBZF	Q9NS37	354 aa		11.01	□□□□□ -0.65
HBP1-211	ENST00000483809	PLEKHG5	O94827	1062 aa		10.99	□□□□□ -0.65
HBP1-211	ENST00000483809	EVX2	Q03828	476 aa		10.99	□□□□□ -0.65
HBP1-211	ENST00000483809	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.98	□□□□□ -0.65
HBP1-211	ENST00000483809	C19orf67	A6NJJ6	358 aa		10.95	□□□□□ -0.66
HBP1-211	ENST00000483809	MNX1	P50219	401 aa	Predicted RBP	10.94	□□□□□ -0.66
HBP1-211	ENST00000483809	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.93	□□□□□ -0.66
HBP1-211	ENST00000483809	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.93	□□□□□ -0.66
HBP1-211	ENST00000483809	SPOCK2	Q92563	424 aa		10.9	□□□□□ -0.66
HBP1-211	ENST00000483809	KLHL34	Q8N239	644 aa		10.89	□□□□□ -0.67
HBP1-211	ENST00000483809	RTN4	Q9NQC3	1192 aa	Known RBP	10.83	□□□□□ -0.68
HBP1-211	ENST00000483809	NPM1	P06748	294 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
HBP1-211	ENST00000483809	CD44	P16070	742 aa	Known RBP	10.82	□□□□□ -0.68
HBP1-211	ENST00000483809	NUBP1	P53384	320 aa		10.82	□□□□□ -0.68
HBP1-211	ENST00000483809	GABBR2	O75899	941 aa		10.73	□□□□□ -0.69
HBP1-211	ENST00000483809	PKD2	Q13563	968 aa		10.73	□□□□□ -0.69
HBP1-211	ENST00000483809	GSE1	Q14687	1217 aa		10.72	□□□□□ -0.69
HBP1-211	ENST00000483809	RASEF	Q8IZ41	740 aa		10.71	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms