RNA–Protein interactions for RNA: ENST00000573778.6

P4HB-217, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 5

Gene P4HB, Length 688 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-217ENST00000573778 NISCHQ9Y2I1 1504 aa47.79■■■■■ 5.24
P4HB-217ENST00000573778 CCDC180Q9P1Z9 1646 aa42.34■■■■■ 4.37
P4HB-217ENST00000573778 ABCC9O60706 1549 aa41.21■■■■■ 4.19
P4HB-217ENST00000573778 DCAF8L2P0C7V8 631 aa39.95■■■■□ 3.99
P4HB-217ENST00000573778 ZCCHC6Q5VYS8 1495 aaKnown RBP39.85■■■■□ 3.97
P4HB-217ENST00000573778 NACADO15069 1562 aa39.82■■■■□ 3.97
P4HB-217ENST00000573778 RB1CC1Q8TDY2 1594 aa39.8■■■■□ 3.96
P4HB-217ENST00000573778 MYO15BQ96JP2 1530 aa39.67■■■■□ 3.94
P4HB-217ENST00000573778 DCAF1Q9Y4B6 1507 aa39.58■■■■□ 3.93
P4HB-217ENST00000573778 UNC13AQ9UPW8 1703 aa38.66■■■■□ 3.78
P4HB-217ENST00000573778 SCRIBQ14160 1630 aa38.64■■■■□ 3.78
P4HB-217ENST00000573778 PABPN1Q86U42 306 aaKnown RBP eCLIP38.58■■■■□ 3.77
P4HB-217ENST00000573778 BICRAQ9NZM4 1560 aa38.44■■■■□ 3.74
P4HB-217ENST00000573778 SHROOM4Q9ULL8 1493 aa38.25■■■■□ 3.71
P4HB-217ENST00000573778 DNAJC5BQ9UF47 199 aa37.51■■■■□ 3.6
P4HB-217ENST00000573778 EIF4G1Q04637 1599 aaKnown RBP37.49■■■■□ 3.59
P4HB-217ENST00000573778 CC2D2AQ9P2K1 1620 aa37.25■■■■□ 3.55
P4HB-217ENST00000573778 CECR2Q9BXF3 1484 aa37.14■■■■□ 3.54
P4HB-217ENST00000573778 BAZ1AQ9NRL2 1556 aaPredicted RBP37.06■■■■□ 3.52
P4HB-217ENST00000573778 SMARCA4P51532 1647 aa36.99■■■■□ 3.51
P4HB-217ENST00000573778 SMARCA2P51531 1590 aa36.78■■■■□ 3.48
P4HB-217ENST00000573778 MROH2BQ7Z745 1585 aa36.78■■■■□ 3.48
P4HB-217ENST00000573778 ATAD2BQ9ULI0 1458 aa36.77■■■■□ 3.48
P4HB-217ENST00000573778 NCAPD3P42695 1498 aa36.74■■■■□ 3.47
P4HB-217ENST00000573778 PEG3Q9GZU2 1588 aa36.64■■■■□ 3.46
P4HB-217ENST00000573778 HMGXB3Q12766 1538 aa36.56■■■■□ 3.44
P4HB-217ENST00000573778 BAZ1BQ9UIG0 1483 aaKnown RBP36.52■■■■□ 3.44
P4HB-217ENST00000573778 RSF1Q96T23 1441 aaPredicted RBP36.51■■■■□ 3.44
P4HB-217ENST00000573778 WIZO95785 1651 aa36.36■■■■□ 3.41
P4HB-217ENST00000573778 TOP2AP11388 1531 aaKnown RBP36.08■■■■□ 3.37
P4HB-217ENST00000573778 SUPT5HO00267 1087 aaKnown RBP35.87■■■■□ 3.33
P4HB-217ENST00000573778 LAMC3Q9Y6N6 1575 aa35.72■■■■□ 3.31
P4HB-217ENST00000573778 CADPSQ9ULU8 1353 aa35.71■■■■□ 3.31
P4HB-217ENST00000573778 NESP48681 1621 aa35.68■■■■□ 3.3
P4HB-217ENST00000573778 CCDC88BA6NC98 1476 aa35.66■■■■□ 3.3
P4HB-217ENST00000573778 ERCC6Q03468 1493 aa35.6■■■■□ 3.29
P4HB-217ENST00000573778 PDS5BQ9NTI5 1447 aa35.56■■■■□ 3.28
P4HB-217ENST00000573778 CFTRP13569 1480 aa35.52■■■■□ 3.28
P4HB-217ENST00000573778 FANCD2Q9BXW9 1451 aa35.28■■■■□ 3.24
P4HB-217ENST00000573778 CEP164Q9UPV0 1460 aa35.22■■■■□ 3.23
P4HB-217ENST00000573778 KIF21AQ7Z4S6 1674 aa35.21■■■■□ 3.23
P4HB-217ENST00000573778 PRDM2Q13029 1718 aa35.13■■■■□ 3.21
P4HB-217ENST00000573778 MRC2Q9UBG0 1479 aa35.1■■■■□ 3.21
P4HB-217ENST00000573778 CUX2O14529 1486 aa35.09■■■■□ 3.21
P4HB-217ENST00000573778 THOC2Q8NI27 1593 aaKnown RBP35.07■■■■□ 3.2
P4HB-217ENST00000573778 WDR62O43379 1518 aa34.93■■■■□ 3.18
P4HB-217ENST00000573778 URB2Q14146 1524 aaKnown RBP34.84■■■■□ 3.17
P4HB-217ENST00000573778 ABCC8Q09428 1581 aa34.83■■■■□ 3.17
P4HB-217ENST00000573778 TOPBP1Q92547 1522 aa34.71■■■■□ 3.15
P4HB-217ENST00000573778 DNMBPQ6XZF7 1577 aa34.7■■■■□ 3.14
P4HB-217ENST00000573778 CUX1P39880 1505 aa34.5■■■■□ 3.11
P4HB-217ENST00000573778 IFT140Q96RY7 1462 aa34.49■■■■□ 3.11
P4HB-217ENST00000573778 WRNQ14191 1432 aaPredicted RBP eCLIP34.47■■■■□ 3.11
P4HB-217ENST00000573778 POLA1P09884 1462 aaPredicted RBP34.43■■■■□ 3.1
P4HB-217ENST00000573778 FGD5Q6ZNL6 1462 aa34.39■■■■□ 3.1
P4HB-217ENST00000573778 SOGA1O94964 1423 aa34.36■■■■□ 3.09
P4HB-217ENST00000573778 TOP2BQ02880 1626 aa34.3■■■■□ 3.08
P4HB-217ENST00000573778 RAD54L2Q9Y4B4 1467 aa34.26■■■■□ 3.07
P4HB-217ENST00000573778 BIVM-ERCC5R4GMW8 1640 aa34.26■■■■□ 3.07
P4HB-217ENST00000573778 SYNJ1O43426 1573 aa34.25■■■■□ 3.07
P4HB-217ENST00000573778 TARBP1Q13395 1621 aaKnown RBP34.24■■■■□ 3.07
P4HB-217ENST00000573778 ZNF608Q9ULD9 1512 aaPredicted RBP34.2■■■■□ 3.07
P4HB-217ENST00000573778 WDR97A6NE52 1622 aa34.1■■■■□ 3.05
P4HB-217ENST00000573778 TDRD9Q8NDG6 1382 aaKnown RBP34.1■■■■□ 3.05
P4HB-217ENST00000573778 AQRO60306 1485 aaKnown RBP eCLIP34.09■■■■□ 3.055e-9■■■■□ 23.7
P4HB-217ENST00000573778 ABCA10Q8WWZ4 1543 aa34.09■■■■□ 3.05
P4HB-217ENST00000573778 EIF4G3O43432 1585 aaKnown RBP34.08■■■■□ 3.05
P4HB-217ENST00000573778 GAPVD1Q14C86 1478 aa33.95■■■■□ 3.03
P4HB-217ENST00000573778 GRIN2BQ13224 1484 aa33.93■■■■□ 3.02
P4HB-217ENST00000573778 TRIM41Q8WV44 630 aa33.92■■■■□ 3.02
P4HB-217ENST00000573778 ABCA5Q8WWZ7 1642 aa33.86■■■■□ 3.01
P4HB-217ENST00000573778 MAGI1Q96QZ7 1491 aaPredicted RBP33.81■■■■□ 3
P4HB-217ENST00000573778 SNAPC4Q5SXM2 1469 aa33.8■■■■□ 3
P4HB-217ENST00000573778 KIF27Q86VH2 1401 aa33.79■■■■□ 3
P4HB-217ENST00000573778 FBLN2P98095 1184 aa33.75■■■□□ 2.99
P4HB-217ENST00000573778 OSCARQ8IYS5 282 aa33.75■■■□□ 2.99
P4HB-217ENST00000573778 PBRM1Q86U86 1689 aa33.74■■■□□ 2.99
P4HB-217ENST00000573778 CHMP7Q8WUX9 453 aaPredicted RBP33.71■■■□□ 2.99
P4HB-217ENST00000573778 ERICH3Q5RHP9 1530 aa33.7■■■□□ 2.99
P4HB-217ENST00000573778 DNAJC5Q9H3Z4 198 aa33.7■■■□□ 2.99
P4HB-217ENST00000573778 SYNJ2O15056 1496 aa33.66■■■□□ 2.98
P4HB-217ENST00000573778 FHAD1B1AJZ9 1412 aa33.59■■■□□ 2.97
P4HB-217ENST00000573778 CHIC1Q5VXU3 224 aa33.58■■■□□ 2.97
P4HB-217ENST00000573778 CHD1O14646 1710 aa33.54■■■□□ 2.96
P4HB-217ENST00000573778 IGF1RP08069 1367 aa33.54■■■□□ 2.96
P4HB-217ENST00000573778 ADAMTS12P58397 1594 aa33.54■■■□□ 2.96
P4HB-217ENST00000573778 GRIN2AQ12879 1464 aa33.45■■■□□ 2.95
P4HB-217ENST00000573778 CUL7Q14999 1698 aa33.42■■■□□ 2.94
P4HB-217ENST00000573778 CARMIL1Q5VZK9 1371 aa33.4■■■□□ 2.94
P4HB-217ENST00000573778 RUSC2Q8N2Y8 1516 aa33.38■■■□□ 2.93
P4HB-217ENST00000573778 EEA1Q15075 1411 aa33.34■■■□□ 2.93
P4HB-217ENST00000573778 NUP160Q12769 1436 aa33.28■■■□□ 2.92
P4HB-217ENST00000573778 CLASP1Q7Z460 1538 aa33.25■■■□□ 2.91
P4HB-217ENST00000573778 CSRNP3Q8WYN3 585 aa33.23■■■□□ 2.91
P4HB-217ENST00000573778 RAPGEF2Q9Y4G8 1499 aa33.22■■■□□ 2.91
P4HB-217ENST00000573778 CEP170Q5SW79 1584 aa33.2■■■□□ 2.91
P4HB-217ENST00000573778 FAM9AQ8IZU1 332 aaPredicted RBP33.14■■■□□ 2.9
P4HB-217ENST00000573778 PRXQ9BXM0 1461 aa33.12■■■□□ 2.89
P4HB-217ENST00000573778 ARHGEF11O15085 1522 aa33.08■■■□□ 2.89
P4HB-217ENST00000573778 KIAA0586Q9BVV6 1533 aa33.07■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms