Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 PHB-214ENST00000614445 1952 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.392e-8■■■□□ 15.5
LARP4Q71RC2 FLNA-216ENST00000490936 5374 ntTSL 1 (best)15.11■□□□□ 0.013e-8■■■□□ 15.5
LARP4Q71RC2 FLNA-217ENST00000498411 368 ntTSL 314.75□□□□□ -0.053e-8■■■□□ 15.5
LARP4Q71RC2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.233e-8■■■□□ 15.5
LARP4Q71RC2 FLNA-206ENST00000420627 8225 ntTSL 512.34□□□□□ -0.433e-8■■■□□ 15.5
LARP4Q71RC2 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.473e-8■■■□□ 15.5
LARP4Q71RC2 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.523e-8■■■□□ 15.5
LARP4Q71RC2 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.63e-8■■■□□ 15.5
LARP4Q71RC2 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.16□□□□□ -0.623e-8■■■□□ 15.5
LARP4Q71RC2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.48■□□□□ 0.232e-9■■■□□ 15.5
LARP4Q71RC2 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC11.37□□□□□ -0.592e-9■■■□□ 15.5
LARP4Q71RC2 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.04■□□□□ 0.81e-10■■■□□ 15.5
LARP4Q71RC2 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.66■□□□□ 0.261e-10■■■□□ 15.5
LARP4Q71RC2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.011e-10■■■□□ 15.5
LARP4Q71RC2 PRC1-206ENST00000555455 830 ntTSL 311.04□□□□□ -0.641e-10■■■□□ 15.5
LARP4Q71RC2 PRC1-217ENST00000560423 755 ntTSL 36.09□□□□□ -1.431e-10■■■□□ 15.5
LARP4Q71RC2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.65□□□□□ -1.671e-10■■■□□ 15.5
LARP4Q71RC2 AAMP-210ENST00000494720 1134 ntTSL 219.76■□□□□ 0.754e-9■■■□□ 15.4
LARP4Q71RC2 DCXR-213ENST00000580320 915 ntTSL 220.14■□□□□ 0.814e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-206ENST00000578273 877 ntTSL 520.06■□□□□ 0.84e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-210ENST00000579334 1251 ntTSL 519.8■□□□□ 0.764e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-214ENST00000580750 1076 ntTSL 519.41■□□□□ 0.74e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-207ENST00000578885 968 ntTSL 519.2■□□□□ 0.664e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.634e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-218ENST00000582900 676 ntTSL 318.54■□□□□ 0.564e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-212ENST00000579842 715 ntTSL 318.54■□□□□ 0.564e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-215ENST00000581584 766 ntTSL 317.91■□□□□ 0.464e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-208ENST00000579004 341 ntTSL 311.44□□□□□ -0.584e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-216ENST00000582074 631 ntTSL 310.53□□□□□ -0.724e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-202ENST00000577286 553 ntTSL 210.49□□□□□ -0.734e-8■■■□□ 15.4
LARP4Q71RC2 DCXR-203ENST00000577532 573 ntTSL 37.02□□□□□ -1.294e-8■■■□□ 15.4
LARP4Q71RC2 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC11.76□□□□□ -0.534e-78■■■□□ 15.4
LARP4Q71RC2 GPX3-202ENST00000517973 612 ntTSL 3 BASIC11.51□□□□□ -0.572e-9■■■□□ 15.4
LARP4Q71RC2 MRPL17-202ENST00000529958 1002 ntTSL 214.5□□□□□ -0.095e-7■■■□□ 15.4
LARP4Q71RC2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.185e-7■■■□□ 15.4
LARP4Q71RC2 MRPL17-204ENST00000532676 303 ntTSL 36.07□□□□□ -1.445e-7■■■□□ 15.4
LARP4Q71RC2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.654e-7■■■□□ 15.4
LARP4Q71RC2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.554e-7■■■□□ 15.4
LARP4Q71RC2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.174e-7■■■□□ 15.4
LARP4Q71RC2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.43□□□□□ -0.16e-13■■■□□ 15.4
LARP4Q71RC2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.212e-17■■■□□ 15.4
LARP4Q71RC2 PFDN5-207ENST00000549759 559 ntTSL 311.93□□□□□ -0.52e-17■■■□□ 15.4
LARP4Q71RC2 PFDN5-204ENST00000547130 559 ntTSL 211.11□□□□□ -0.632e-17■■■□□ 15.4
LARP4Q71RC2 PFDN5-216ENST00000552341 1980 ntTSL 210.67□□□□□ -0.72e-17■■■□□ 15.4
LARP4Q71RC2 PFDN5-212ENST00000550880 595 ntTSL 29.97□□□□□ -0.812e-17■■■□□ 15.4
LARP4Q71RC2 PFDN5-201ENST00000243040 564 ntTSL 1 (best)9.8□□□□□ -0.842e-17■■■□□ 15.4
LARP4Q71RC2 PFDN5-218ENST00000552742 571 ntTSL 39.04□□□□□ -0.962e-17■■■□□ 15.4
LARP4Q71RC2 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC8.64□□□□□ -1.032e-17■■■□□ 15.4
LARP4Q71RC2 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.25□□□□□ -1.252e-17■■■□□ 15.4
LARP4Q71RC2 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.252e-17■■■□□ 15.4
LARP4Q71RC2 OAZ1-203ENST00000586054 2832 nt20.49■□□□□ 0.873e-11■■■□□ 15.4
LARP4Q71RC2 NDUFA11-203ENST00000591160 604 ntTSL 318.31■□□□□ 0.522e-13■■■□□ 15.4
LARP4Q71RC2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.485e-7■■■□□ 15.4
LARP4Q71RC2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.385e-7■■■□□ 15.4
LARP4Q71RC2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.031e-11■■■□□ 15.4
LARP4Q71RC2 MSH5-SAPCD1-208ENST00000498473 2216 ntAPPRIS ALT2 TSL 1 (best)16.12■□□□□ 0.177e-7■■■□□ 15.4
LARP4Q71RC2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.097e-7■■■□□ 15.4
LARP4Q71RC2 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.287e-7■■■□□ 15.4
LARP4Q71RC2 MSH5-SAPCD1-205ENST00000476085 950 ntAPPRIS ALT2 TSL 211.09□□□□□ -0.637e-7■■■□□ 15.4
LARP4Q71RC2 MSH5-SAPCD1-207ENST00000493662 3991 ntAPPRIS P5 TSL 1 (best) BASIC10.3□□□□□ -0.767e-7■■■□□ 15.4
LARP4Q71RC2 AL121845.2-202ENST00000476221 446 ntTSL 516.26■□□□□ 0.195e-8■■■□□ 15.4
LARP4Q71RC2 ANP32E-207ENST00000534437 616 ntTSL 35.34□□□□□ -1.553e-11■■■□□ 15.4
LARP4Q71RC2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.77□□□□□ -1.973e-11■■■□□ 15.4
LARP4Q71RC2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.536e-7■■■□□ 15.4
LARP4Q71RC2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.75■□□□□ 0.276e-7■■■□□ 15.4
LARP4Q71RC2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.266e-7■■■□□ 15.4
LARP4Q71RC2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.166e-7■■■□□ 15.4
LARP4Q71RC2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.67■□□□□ 0.16e-7■■■□□ 15.4
LARP4Q71RC2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.046e-7■■■□□ 15.4
LARP4Q71RC2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.1□□□□□ -0.156e-7■■■□□ 15.4
LARP4Q71RC2 CTSD-209ENST00000637158 1200 ntTSL 516.49■□□□□ 0.239e-21■■■□□ 15.4
LARP4Q71RC2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.3■□□□□ 0.525e-6■■■□□ 15.4
LARP4Q71RC2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.055e-6■■■□□ 15.4
LARP4Q71RC2 CCT4-203ENST00000461540 638 ntTSL 35.14□□□□□ -1.595e-6■■■□□ 15.4
LARP4Q71RC2 PHB2-208ENST00000543465 1518 ntTSL 520.99■□□□□ 0.954e-10■■■□□ 15.4
LARP4Q71RC2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.81■□□□□ 0.64e-10■■■□□ 15.4
LARP4Q71RC2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.484e-10■■■□□ 15.4
LARP4Q71RC2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.04■□□□□ 0.324e-10■■■□□ 15.4
LARP4Q71RC2 LAMTOR5-205ENST00000531779 569 ntTSL 220.19■□□□□ 0.822e-7■■■□□ 15.4
LARP4Q71RC2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.183e-13■■■□□ 15.4
LARP4Q71RC2 CSDE1-217ENST00000534699 2667 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.892e-7■■■□□ 15.4
LARP4Q71RC2 CPNE7-205ENST00000529800 519 ntTSL 59□□□□□ -0.973e-13■■■□□ 15.4
LARP4Q71RC2 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.06□□□□□ -1.122e-7■■■□□ 15.4
LARP4Q71RC2 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.22□□□□□ -1.252e-7■■■□□ 15.4
LARP4Q71RC2 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.99□□□□□ -1.292e-8■■■□□ 15.4
LARP4Q71RC2 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.56□□□□□ -1.362e-8■■■□□ 15.4
LARP4Q71RC2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.372e-8■■■□□ 15.4
LARP4Q71RC2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.4□□□□□ -1.382e-7■■■□□ 15.4
LARP4Q71RC2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.51□□□□□ -1.532e-8■■■□□ 15.4
LARP4Q71RC2 RPS5-207ENST00000599232 1747 nt16.73■□□□□ 0.272e-23■■■□□ 15.4
LARP4Q71RC2 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.958e-9■■■□□ 15.4
LARP4Q71RC2 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.998e-9■■■□□ 15.4
LARP4Q71RC2 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.078e-9■■■□□ 15.4
LARP4Q71RC2 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC8.76□□□□□ -1.011e-8■■■□□ 15.4
LARP4Q71RC2 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.511e-8■■■□□ 15.4
LARP4Q71RC2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.07■□□□□ 0.481e-6■■■□□ 15.4
LARP4Q71RC2 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.412e-31■■■□□ 15.4
LARP4Q71RC2 UQCRB-205ENST00000518876 3968 ntTSL 1 (best)6.62□□□□□ -1.352e-31■■■□□ 15.4
LARP4Q71RC2 UQCRB-203ENST00000517603 1041 ntTSL 1 (best)6.52□□□□□ -1.372e-31■■■□□ 15.4
LARP4Q71RC2 UQCRB-207ENST00000521036 982 ntTSL 26.2□□□□□ -1.422e-31■■■□□ 15.4
Retrieved 100 of 15,922 protein–RNA pairs in 195.5 ms