RNA–Protein interactions for RNA: ENST00000560423.5

PRC1-217, Transcript of protein regulator of cytokinesis 1, humanhuman

TSL 3

Gene PRC1, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRC1-217ENST00000560423 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
PRC1-217ENST00000560423 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
PRC1-217ENST00000560423 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
PRC1-217ENST00000560423 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
PRC1-217ENST00000560423 FOXD1Q16676 465 aa17.44■□□□□ 0.38
PRC1-217ENST00000560423 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
PRC1-217ENST00000560423 MSH5O43196 834 aa16.3■□□□□ 0.2
PRC1-217ENST00000560423 PPP6R1Q9UPN7 881 aa16.26■□□□□ 0.19
PRC1-217ENST00000560423 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
PRC1-217ENST00000560423 ADRA2BP18089 450 aa16.19■□□□□ 0.18
PRC1-217ENST00000560423 POTEDQ86YR6 584 aa16.15■□□□□ 0.18
PRC1-217ENST00000560423 NISCHQ9Y2I1 1504 aa15.99■□□□□ 0.15
PRC1-217ENST00000560423 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
PRC1-217ENST00000560423 DMRT2Q9Y5R5 561 aa14.78□□□□□ -0.04
PRC1-217ENST00000560423 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
PRC1-217ENST00000560423 PPP4R3CPQ6ZMV5 832 aa14.43□□□□□ -0.1
PRC1-217ENST00000560423 ABCC9O60706 1549 aa14.32□□□□□ -0.12
PRC1-217ENST00000560423 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
PRC1-217ENST00000560423 HOXD11P31277 338 aaPredicted RBP14.2□□□□□ -0.14
PRC1-217ENST00000560423 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
PRC1-217ENST00000560423 CACNB1Q02641 598 aaPredicted RBP14.11□□□□□ -0.15
PRC1-217ENST00000560423 CCDC180Q9P1Z9 1646 aa14.1□□□□□ -0.15
PRC1-217ENST00000560423 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
PRC1-217ENST00000560423 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
PRC1-217ENST00000560423 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
PRC1-217ENST00000560423 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
PRC1-217ENST00000560423 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
PRC1-217ENST00000560423 NPM3O75607 178 aaKnown RBP13.64□□□□□ -0.23
PRC1-217ENST00000560423 DCAF8L2P0C7V8 631 aa13.64□□□□□ -0.23
PRC1-217ENST00000560423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.53□□□□□ -0.242e-8■■■□□ 18
PRC1-217ENST00000560423 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRC1-217ENST00000560423 RB1CC1Q8TDY2 1594 aa13.46□□□□□ -0.25
PRC1-217ENST00000560423 NACADO15069 1562 aa13.4□□□□□ -0.26
PRC1-217ENST00000560423 KCNA4P22459 653 aa13.31□□□□□ -0.28
PRC1-217ENST00000560423 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
PRC1-217ENST00000560423 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
PRC1-217ENST00000560423 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
PRC1-217ENST00000560423 MYO15BQ96JP2 1530 aa13.2□□□□□ -0.3
PRC1-217ENST00000560423 UNC13AQ9UPW8 1703 aa13.18□□□□□ -0.3
PRC1-217ENST00000560423 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
PRC1-217ENST00000560423 DCAF1Q9Y4B6 1507 aa13.09□□□□□ -0.31
PRC1-217ENST00000560423 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
PRC1-217ENST00000560423 CAPN15O75808 1086 aa13.07□□□□□ -0.32
PRC1-217ENST00000560423 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
PRC1-217ENST00000560423 DSG3P32926 999 aa13.02□□□□□ -0.33
PRC1-217ENST00000560423 CC2D2AQ9P2K1 1620 aa12.84□□□□□ -0.35
PRC1-217ENST00000560423 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
PRC1-217ENST00000560423 CECR2Q9BXF3 1484 aa12.83□□□□□ -0.36
PRC1-217ENST00000560423 EIF4G1Q04637 1599 aaKnown RBP12.82□□□□□ -0.36
PRC1-217ENST00000560423 SHROOM4Q9ULL8 1493 aa12.79□□□□□ -0.36
PRC1-217ENST00000560423 ABCB7O75027 752 aa12.79□□□□□ -0.36
PRC1-217ENST00000560423 APLP2Q06481 763 aa12.78□□□□□ -0.36
PRC1-217ENST00000560423 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
PRC1-217ENST00000560423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
PRC1-217ENST00000560423 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
PRC1-217ENST00000560423 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
PRC1-217ENST00000560423 POTEHQ6S545 545 aa12.63□□□□□ -0.39
PRC1-217ENST00000560423 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
PRC1-217ENST00000560423 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
PRC1-217ENST00000560423 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
PRC1-217ENST00000560423 ATAD2BQ9ULI0 1458 aa12.47□□□□□ -0.41
PRC1-217ENST00000560423 POLA2Q14181 598 aa12.47□□□□□ -0.41
PRC1-217ENST00000560423 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
PRC1-217ENST00000560423 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
PRC1-217ENST00000560423 SMARCA4P51532 1647 aa12.4□□□□□ -0.42
PRC1-217ENST00000560423 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
PRC1-217ENST00000560423 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
PRC1-217ENST00000560423 NESP48681 1621 aa12.37□□□□□ -0.43
PRC1-217ENST00000560423 BAZ1AQ9NRL2 1556 aaPredicted RBP12.31□□□□□ -0.44
PRC1-217ENST00000560423 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
PRC1-217ENST00000560423 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
PRC1-217ENST00000560423 HMGXB3Q12766 1538 aa12.28□□□□□ -0.44
PRC1-217ENST00000560423 ZBTB22O15209 634 aa12.25□□□□□ -0.45
PRC1-217ENST00000560423 ERCC6Q03468 1493 aa12.24□□□□□ -0.45
PRC1-217ENST00000560423 DNAJC5Q9H3Z4 198 aa12.24□□□□□ -0.45
PRC1-217ENST00000560423 PEG3Q9GZU2 1588 aa12.23□□□□□ -0.45
PRC1-217ENST00000560423 WIZO95785 1651 aa12.2□□□□□ -0.46
PRC1-217ENST00000560423 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
PRC1-217ENST00000560423 RSF1Q96T23 1441 aaPredicted RBP12.18□□□□□ -0.46
PRC1-217ENST00000560423 CUX2O14529 1486 aa12.14□□□□□ -0.47
PRC1-217ENST00000560423 ZBTB12Q9Y330 459 aaPredicted RBP12.14□□□□□ -0.47
PRC1-217ENST00000560423 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
PRC1-217ENST00000560423 OSCARQ8IYS5 282 aa12.08□□□□□ -0.48
PRC1-217ENST00000560423 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
PRC1-217ENST00000560423 LAMC3Q9Y6N6 1575 aa12.07□□□□□ -0.48
PRC1-217ENST00000560423 THOC2Q8NI27 1593 aaKnown RBP12.05□□□□□ -0.48
PRC1-217ENST00000560423 PDS5BQ9NTI5 1447 aa12.05□□□□□ -0.48
PRC1-217ENST00000560423 KIF21AQ7Z4S6 1674 aa12.03□□□□□ -0.48
PRC1-217ENST00000560423 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
PRC1-217ENST00000560423 REM2Q8IYK8 340 aaPredicted RBP12□□□□□ -0.49
PRC1-217ENST00000560423 CFTRP13569 1480 aa11.98□□□□□ -0.49
PRC1-217ENST00000560423 TOP2AP11388 1531 aaKnown RBP11.97□□□□□ -0.49
PRC1-217ENST00000560423 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.49
PRC1-217ENST00000560423 FANCD2Q9BXW9 1451 aa11.96□□□□□ -0.49
PRC1-217ENST00000560423 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
PRC1-217ENST00000560423 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
PRC1-217ENST00000560423 CEP164Q9UPV0 1460 aa11.91□□□□□ -0.5
PRC1-217ENST00000560423 WDR62O43379 1518 aa11.91□□□□□ -0.5
PRC1-217ENST00000560423 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
PRC1-217ENST00000560423 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms