RNA–Protein interactions for RNA: ENST00000549759.1

PFDN5-207, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-207ENST00000549759 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
PFDN5-207ENST00000549759 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
PFDN5-207ENST00000549759 ABCC9O60706 1549 aa26.28■■□□□ 1.8
PFDN5-207ENST00000549759 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
PFDN5-207ENST00000549759 ZCCHC6Q5VYS8 1495 aaKnown RBP25.37■■□□□ 1.65
PFDN5-207ENST00000549759 NACADO15069 1562 aa25.35■■□□□ 1.65
PFDN5-207ENST00000549759 RB1CC1Q8TDY2 1594 aa25.33■■□□□ 1.65
PFDN5-207ENST00000549759 MYO15BQ96JP2 1530 aa25.28■■□□□ 1.64
PFDN5-207ENST00000549759 DCAF1Q9Y4B6 1507 aa25.22■■□□□ 1.63
PFDN5-207ENST00000549759 PABPN1Q86U42 306 aaKnown RBP eCLIP24.7■■□□□ 1.54
PFDN5-207ENST00000549759 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
PFDN5-207ENST00000549759 UNC13AQ9UPW8 1703 aa24.48■■□□□ 1.51
PFDN5-207ENST00000549759 BICRAQ9NZM4 1560 aa24.46■■□□□ 1.51
PFDN5-207ENST00000549759 SHROOM4Q9ULL8 1493 aa24.35■■□□□ 1.49
PFDN5-207ENST00000549759 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
PFDN5-207ENST00000549759 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
PFDN5-207ENST00000549759 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.39
PFDN5-207ENST00000549759 CECR2Q9BXF3 1484 aa23.7■■□□□ 1.38
PFDN5-207ENST00000549759 BAZ1AQ9NRL2 1556 aaPredicted RBP23.61■■□□□ 1.37
PFDN5-207ENST00000549759 SMARCA4P51532 1647 aa23.52■■□□□ 1.36
PFDN5-207ENST00000549759 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
PFDN5-207ENST00000549759 MROH2BQ7Z745 1585 aa23.45■■□□□ 1.34
PFDN5-207ENST00000549759 NCAPD3P42695 1498 aa23.45■■□□□ 1.34
PFDN5-207ENST00000549759 SMARCA2P51531 1590 aa23.42■■□□□ 1.34
PFDN5-207ENST00000549759 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.32
PFDN5-207ENST00000549759 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
PFDN5-207ENST00000549759 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
PFDN5-207ENST00000549759 HMGXB3Q12766 1538 aa23.26■■□□□ 1.31
PFDN5-207ENST00000549759 WIZO95785 1651 aa23.13■■□□□ 1.29
PFDN5-207ENST00000549759 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
PFDN5-207ENST00000549759 TOP2AP11388 1531 aaKnown RBP22.97■■□□□ 1.27
PFDN5-207ENST00000549759 CADPSQ9ULU8 1353 aa22.82■■□□□ 1.24
PFDN5-207ENST00000549759 CCDC88BA6NC98 1476 aa22.76■■□□□ 1.23
PFDN5-207ENST00000549759 NESP48681 1621 aa22.75■■□□□ 1.23
PFDN5-207ENST00000549759 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
PFDN5-207ENST00000549759 PDS5BQ9NTI5 1447 aa22.71■■□□□ 1.23
PFDN5-207ENST00000549759 ERCC6Q03468 1493 aa22.7■■□□□ 1.22
PFDN5-207ENST00000549759 CFTRP13569 1480 aa22.66■■□□□ 1.22
PFDN5-207ENST00000549759 FANCD2Q9BXW9 1451 aa22.49■■□□□ 1.19
PFDN5-207ENST00000549759 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
PFDN5-207ENST00000549759 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
PFDN5-207ENST00000549759 CUX2O14529 1486 aa22.36■■□□□ 1.17
PFDN5-207ENST00000549759 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.17
PFDN5-207ENST00000549759 THOC2Q8NI27 1593 aaKnown RBP22.26■■□□□ 1.15
PFDN5-207ENST00000549759 WDR62O43379 1518 aa22.23■■□□□ 1.15
PFDN5-207ENST00000549759 ABCC8Q09428 1581 aa22.22■■□□□ 1.15
PFDN5-207ENST00000549759 PRDM2Q13029 1718 aa22.21■■□□□ 1.15
PFDN5-207ENST00000549759 URB2Q14146 1524 aaKnown RBP22.2■■□□□ 1.14
PFDN5-207ENST00000549759 TOPBP1Q92547 1522 aa22.11■■□□□ 1.13
PFDN5-207ENST00000549759 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.12
PFDN5-207ENST00000549759 WRNQ14191 1432 aaPredicted RBP eCLIP22■■□□□ 1.113e-8■□□□□ 9.6
PFDN5-207ENST00000549759 IFT140Q96RY7 1462 aa22■■□□□ 1.11
PFDN5-207ENST00000549759 CUX1P39880 1505 aa21.98■■□□□ 1.11
PFDN5-207ENST00000549759 SOGA1O94964 1423 aa21.96■■□□□ 1.11
PFDN5-207ENST00000549759 POLA1P09884 1462 aaPredicted RBP21.95■■□□□ 1.1
PFDN5-207ENST00000549759 FGD5Q6ZNL6 1462 aa21.92■■□□□ 1.1
PFDN5-207ENST00000549759 RAD54L2Q9Y4B4 1467 aa21.86■■□□□ 1.09
PFDN5-207ENST00000549759 TOP2BQ02880 1626 aa21.83■■□□□ 1.08
PFDN5-207ENST00000549759 ZNF608Q9ULD9 1512 aaPredicted RBP21.81■■□□□ 1.08
PFDN5-207ENST00000549759 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
PFDN5-207ENST00000549759 SYNJ1O43426 1573 aa21.79■■□□□ 1.08
PFDN5-207ENST00000549759 AQRO60306 1485 aaKnown RBP eCLIP21.78■■□□□ 1.086e-7■■■■■ 32.7
PFDN5-207ENST00000549759 TARBP1Q13395 1621 aaKnown RBP21.78■■□□□ 1.08
PFDN5-207ENST00000549759 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
PFDN5-207ENST00000549759 TRIM41Q8WV44 630 aa21.75■■□□□ 1.07
PFDN5-207ENST00000549759 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
PFDN5-207ENST00000549759 WDR97A6NE52 1622 aa21.67■■□□□ 1.06
PFDN5-207ENST00000549759 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
PFDN5-207ENST00000549759 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
PFDN5-207ENST00000549759 GRIN2BQ13224 1484 aa21.64■■□□□ 1.06
PFDN5-207ENST00000549759 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
PFDN5-207ENST00000549759 FBLN2P98095 1184 aa21.61■■□□□ 1.05
PFDN5-207ENST00000549759 CHMP7Q8WUX9 453 aaPredicted RBP21.59■■□□□ 1.05
PFDN5-207ENST00000549759 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
PFDN5-207ENST00000549759 DNAJC5Q9H3Z4 198 aa21.58■■□□□ 1.05
PFDN5-207ENST00000549759 SNAPC4Q5SXM2 1469 aa21.54■■□□□ 1.04
PFDN5-207ENST00000549759 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
PFDN5-207ENST00000549759 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
PFDN5-207ENST00000549759 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
PFDN5-207ENST00000549759 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
PFDN5-207ENST00000549759 IGF1RP08069 1367 aa21.47■■□□□ 1.03
PFDN5-207ENST00000549759 SYNJ2O15056 1496 aa21.46■■□□□ 1.03
PFDN5-207ENST00000549759 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
PFDN5-207ENST00000549759 PBRM1Q86U86 1689 aa21.38■■□□□ 1.01
PFDN5-207ENST00000549759 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
PFDN5-207ENST00000549759 GRIN2AQ12879 1464 aa21.32■■□□□ 1
PFDN5-207ENST00000549759 ADAMTS12P58397 1594 aa21.31■■□□□ 1
PFDN5-207ENST00000549759 RUSC2Q8N2Y8 1516 aa21.31■■□□□ 1
PFDN5-207ENST00000549759 CSRNP3Q8WYN3 585 aa21.3■■□□□ 1
PFDN5-207ENST00000549759 EEA1Q15075 1411 aa21.28■■□□□ 1
PFDN5-207ENST00000549759 CHD1O14646 1710 aa21.26■□□□□ 0.99
PFDN5-207ENST00000549759 FAM9AQ8IZU1 332 aaPredicted RBP21.24■□□□□ 0.99
PFDN5-207ENST00000549759 CUL7Q14999 1698 aa21.24■□□□□ 0.99
PFDN5-207ENST00000549759 NUP160Q12769 1436 aa21.22■□□□□ 0.99
PFDN5-207ENST00000549759 RAPGEF2Q9Y4G8 1499 aa21.2■□□□□ 0.98
PFDN5-207ENST00000549759 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
PFDN5-207ENST00000549759 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.98
PFDN5-207ENST00000549759 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
PFDN5-207ENST00000549759 CEP170Q5SW79 1584 aa21.12■□□□□ 0.97
PFDN5-207ENST00000549759 KIAA0586Q9BVV6 1533 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms