Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.71■□□□□ 0.75
SF3A2Q15428 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SF3A2Q15428 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 CRYGFP-201ENST00000418459 633 ntBASIC19.71■□□□□ 0.75
SF3A2Q15428 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.71■□□□□ 0.75
SF3A2Q15428 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SF3A2Q15428 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SF3A2Q15428 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SF3A2Q15428 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.71■□□□□ 0.75
SF3A2Q15428 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3A2Q15428 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.7■□□□□ 0.74
SF3A2Q15428 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3A2Q15428 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SF3A2Q15428 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.7■□□□□ 0.74
SF3A2Q15428 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.7■□□□□ 0.74
SF3A2Q15428 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.7■□□□□ 0.74
SF3A2Q15428 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.7■□□□□ 0.74
SF3A2Q15428 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3A2Q15428 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.7■□□□□ 0.74
SF3A2Q15428 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.7■□□□□ 0.74
SF3A2Q15428 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.7■□□□□ 0.74
SF3A2Q15428 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.7■□□□□ 0.74
SF3A2Q15428 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.7■□□□□ 0.74
SF3A2Q15428 C2orf69P3-201ENST00000565542 1120 ntBASIC19.7■□□□□ 0.74
SF3A2Q15428 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3A2Q15428 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.7■□□□□ 0.74
SF3A2Q15428 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SF3A2Q15428 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SF3A2Q15428 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
SF3A2Q15428 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SF3A2Q15428 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SF3A2Q15428 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SF3A2Q15428 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.7■□□□□ 0.74
SF3A2Q15428 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SF3A2Q15428 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SF3A2Q15428 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3A2Q15428 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SF3A2Q15428 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.69■□□□□ 0.74
SF3A2Q15428 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SF3A2Q15428 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.69■□□□□ 0.74
SF3A2Q15428 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SF3A2Q15428 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SF3A2Q15428 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.69■□□□□ 0.74
SF3A2Q15428 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.69■□□□□ 0.74
SF3A2Q15428 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.69■□□□□ 0.74
SF3A2Q15428 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3A2Q15428 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3A2Q15428 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3A2Q15428 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SF3A2Q15428 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3A2Q15428 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SF3A2Q15428 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3A2Q15428 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3A2Q15428 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.68■□□□□ 0.74
SF3A2Q15428 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3A2Q15428 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3A2Q15428 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SF3A2Q15428 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3A2Q15428 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SF3A2Q15428 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SF3A2Q15428 AC063952.2-201ENST00000498792 1227 ntBASIC19.68■□□□□ 0.74
SF3A2Q15428 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SF3A2Q15428 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SF3A2Q15428 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.68■□□□□ 0.74
SF3A2Q15428 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3A2Q15428 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.68■□□□□ 0.74
SF3A2Q15428 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3A2Q15428 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3A2Q15428 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SF3A2Q15428 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SF3A2Q15428 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SF3A2Q15428 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.67■□□□□ 0.74
SF3A2Q15428 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SF3A2Q15428 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SF3A2Q15428 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SF3A2Q15428 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SF3A2Q15428 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
SF3A2Q15428 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.67■□□□□ 0.74
SF3A2Q15428 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
SF3A2Q15428 LINC01238-205ENST00000567549 1107 ntBASIC19.67■□□□□ 0.74
SF3A2Q15428 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.67■□□□□ 0.74
SF3A2Q15428 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SF3A2Q15428 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.67■□□□□ 0.74
SF3A2Q15428 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.67■□□□□ 0.74
SF3A2Q15428 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.67■□□□□ 0.74
SF3A2Q15428 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SF3A2Q15428 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.67■□□□□ 0.74
SF3A2Q15428 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms