Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 ME2-206ENST00000638410 2289 ntTSL 5 BASIC11.61□□□□□ -0.55
RPS28P62857 ME2-210ENST00000639255 2262 ntTSL 5 BASIC11.61□□□□□ -0.55
RPS28P62857 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.61□□□□□ -0.55
RPS28P62857 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC11.61□□□□□ -0.55
RPS28P62857 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
RPS28P62857 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC11.61□□□□□ -0.55
RPS28P62857 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RPS28P62857 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RPS28P62857 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.61□□□□□ -0.55
RPS28P62857 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RPS28P62857 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPS28P62857 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RPS28P62857 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
RPS28P62857 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
RPS28P62857 POLI-202ENST00000406285 2030 ntTSL 2 BASIC11.6□□□□□ -0.55
RPS28P62857 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.6□□□□□ -0.55
RPS28P62857 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
RPS28P62857 AC023824.1-201ENST00000562945 2975 ntBASIC11.6□□□□□ -0.55
RPS28P62857 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 AP004607.7-201ENST00000527152 1677 ntBASIC11.6□□□□□ -0.55
RPS28P62857 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RPS28P62857 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC11.6□□□□□ -0.55
RPS28P62857 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RPS28P62857 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
RPS28P62857 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC11.6□□□□□ -0.55
RPS28P62857 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.6□□□□□ -0.55
RPS28P62857 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
RPS28P62857 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.6□□□□□ -0.55
RPS28P62857 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPS28P62857 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC11.6□□□□□ -0.55
RPS28P62857 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC11.6□□□□□ -0.55
RPS28P62857 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
RPS28P62857 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
RPS28P62857 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RPS28P62857 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
RPS28P62857 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC11.59□□□□□ -0.55
RPS28P62857 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
RPS28P62857 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
RPS28P62857 AC100803.2-201ENST00000562459 1963 ntBASIC11.59□□□□□ -0.55
RPS28P62857 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
RPS28P62857 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.59□□□□□ -0.55
RPS28P62857 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.59□□□□□ -0.55
RPS28P62857 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.59□□□□□ -0.55
RPS28P62857 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RPS28P62857 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
RPS28P62857 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC11.59□□□□□ -0.55
RPS28P62857 EFTUD1P1-204ENST00000560401 1798 ntBASIC11.59□□□□□ -0.55
RPS28P62857 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.59□□□□□ -0.55
RPS28P62857 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
RPS28P62857 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RPS28P62857 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPS28P62857 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms