Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 BX005040.4-201ENST00000637145 1518 ntBASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 AC009053.2-201ENST00000563701 2365 ntBASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
H2AFB1P0C5Y9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 AC012313.1-201ENST00000593393 3059 ntBASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
H2AFB1P0C5Y9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 AC009113.1-201ENST00000570267 2443 ntBASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 RARRES2P2-201ENST00000394842 485 ntBASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFB1P0C5Y9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFB1P0C5Y9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2AFB1P0C5Y9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2AFB1P0C5Y9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2AFB1P0C5Y9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms