Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.64■□□□□ 0.09
TRGV3P03979 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.64■□□□□ 0.09
TRGV3P03979 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.64■□□□□ 0.09
TRGV3P03979 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.64■□□□□ 0.09
TRGV3P03979 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.64■□□□□ 0.09
TRGV3P03979 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.64■□□□□ 0.09
TRGV3P03979 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.64■□□□□ 0.09
TRGV3P03979 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRGV3P03979 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 PTBP1P-201ENST00000554374 1601 ntBASIC15.64■□□□□ 0.09
TRGV3P03979 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.63■□□□□ 0.09
TRGV3P03979 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV3P03979 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV3P03979 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV3P03979 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV3P03979 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
TRGV3P03979 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV3P03979 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV3P03979 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV3P03979 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV3P03979 KRT18P6-201ENST00000555540 1265 ntBASIC15.63■□□□□ 0.09
TRGV3P03979 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV3P03979 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV3P03979 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV3P03979 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV3P03979 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRGV3P03979 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV3P03979 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV3P03979 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRGV3P03979 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV3P03979 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRGV3P03979 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 KRT16P6-202ENST00000425692 1426 ntBASIC15.62■□□□□ 0.09
TRGV3P03979 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRGV3P03979 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.62■□□□□ 0.09
TRGV3P03979 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 PNMA6B-201ENST00000538162 1200 ntBASIC15.62■□□□□ 0.09
TRGV3P03979 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.62■□□□□ 0.09
TRGV3P03979 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.62■□□□□ 0.09
TRGV3P03979 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.62■□□□□ 0.09
TRGV3P03979 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRGV3P03979 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.62■□□□□ 0.09
TRGV3P03979 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRGV3P03979 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRGV3P03979 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV3P03979 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.61■□□□□ 0.09
TRGV3P03979 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.61■□□□□ 0.09
TRGV3P03979 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.61■□□□□ 0.09
TRGV3P03979 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.61■□□□□ 0.09
TRGV3P03979 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.61■□□□□ 0.09
TRGV3P03979 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.61■□□□□ 0.09
TRGV3P03979 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.61■□□□□ 0.09
TRGV3P03979 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRGV3P03979 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.61■□□□□ 0.09
TRGV3P03979 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.61■□□□□ 0.09
TRGV3P03979 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.61■□□□□ 0.09
TRGV3P03979 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.61■□□□□ 0.09
TRGV3P03979 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.61■□□□□ 0.09
TRGV3P03979 AC005829.2-201ENST00000571422 1056 ntBASIC15.61■□□□□ 0.09
TRGV3P03979 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
TRGV3P03979 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV3P03979 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms