Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 NOC2LP1-202ENST00000452600 2235 ntBASIC17.17■□□□□ 0.34
HLA-DQB1P01920 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 KRT8P36-201ENST00000489121 1440 ntBASIC17.17■□□□□ 0.34
HLA-DQB1P01920 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 AC008175.2-201ENST00000612840 297 ntBASIC17.17■□□□□ 0.34
HLA-DQB1P01920 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB1P01920 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 AC008764.7-201ENST00000593779 1081 ntBASIC17.16■□□□□ 0.34
HLA-DQB1P01920 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB1P01920 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 AC245052.3-201ENST00000450182 901 ntBASIC17.15■□□□□ 0.34
HLA-DQB1P01920 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 TSPY26P-201ENST00000476365 1326 ntBASIC17.15■□□□□ 0.34
HLA-DQB1P01920 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB1P01920 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
HLA-DQB1P01920 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HLA-DQB1P01920 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HLA-DQB1P01920 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms