Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.79■□□□□ 0.6
URB1O60287 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
URB1O60287 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.79■□□□□ 0.6
URB1O60287 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.79■□□□□ 0.6
URB1O60287 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
URB1O60287 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
URB1O60287 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.79■□□□□ 0.6
URB1O60287 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.79■□□□□ 0.6
URB1O60287 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.79■□□□□ 0.6
URB1O60287 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
URB1O60287 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.79■□□□□ 0.6
URB1O60287 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.79■□□□□ 0.6
URB1O60287 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.79■□□□□ 0.6
URB1O60287 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
URB1O60287 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.79■□□□□ 0.6
URB1O60287 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.79■□□□□ 0.6
URB1O60287 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
URB1O60287 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
URB1O60287 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.78■□□□□ 0.6
URB1O60287 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
URB1O60287 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
URB1O60287 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
URB1O60287 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
URB1O60287 TSPY14P-201ENST00000303979 915 ntBASIC18.78■□□□□ 0.6
URB1O60287 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
URB1O60287 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.78■□□□□ 0.6
URB1O60287 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.78■□□□□ 0.6
URB1O60287 AC026271.3-201ENST00000571884 352 ntBASIC18.78■□□□□ 0.6
URB1O60287 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.78■□□□□ 0.6
URB1O60287 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.78■□□□□ 0.6
URB1O60287 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.78■□□□□ 0.6
URB1O60287 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.78■□□□□ 0.6
URB1O60287 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.78■□□□□ 0.6
URB1O60287 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
URB1O60287 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
URB1O60287 FAM99A-202ENST00000538190 1989 ntBASIC18.78■□□□□ 0.6
URB1O60287 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
URB1O60287 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.78■□□□□ 0.6
URB1O60287 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
URB1O60287 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
URB1O60287 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.77■□□□□ 0.6
URB1O60287 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.77■□□□□ 0.6
URB1O60287 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
URB1O60287 EGLN1P1-201ENST00000531623 762 ntBASIC18.77■□□□□ 0.6
URB1O60287 CLEC4GP1-201ENST00000596555 870 ntBASIC18.77■□□□□ 0.6
URB1O60287 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.77■□□□□ 0.6
URB1O60287 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
URB1O60287 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
URB1O60287 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.77■□□□□ 0.6
URB1O60287 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
URB1O60287 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
URB1O60287 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.77■□□□□ 0.6
URB1O60287 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.77■□□□□ 0.6
URB1O60287 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
URB1O60287 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.77■□□□□ 0.6
URB1O60287 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
URB1O60287 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
URB1O60287 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
URB1O60287 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
URB1O60287 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
URB1O60287 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
URB1O60287 AC011506.1-201ENST00000474329 610 ntBASIC18.77■□□□□ 0.6
URB1O60287 AC097488.1-201ENST00000507834 756 ntBASIC18.77■□□□□ 0.6
URB1O60287 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
URB1O60287 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.77■□□□□ 0.6
URB1O60287 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
URB1O60287 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
URB1O60287 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
URB1O60287 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
URB1O60287 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.77■□□□□ 0.59
URB1O60287 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
URB1O60287 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
URB1O60287 HMGA1P5-201ENST00000412453 271 ntBASIC18.76■□□□□ 0.59
URB1O60287 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.76■□□□□ 0.59
URB1O60287 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.76■□□□□ 0.59
URB1O60287 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
URB1O60287 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.76■□□□□ 0.59
URB1O60287 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.76■□□□□ 0.59
URB1O60287 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms