Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RNA5SP206-201ENST00000516703 121 ntBASIC11.88□□□□□ -0.51
SMARCA4P51532 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SMARCA4P51532 AL512624.1-201ENST00000613638 469 ntBASIC11.88□□□□□ -0.51
SMARCA4P51532 AC120057.5-201ENST00000623840 154 ntBASIC11.88□□□□□ -0.51
SMARCA4P51532 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
SMARCA4P51532 LINC02495-203ENST00000636704 242 ntBASIC11.88□□□□□ -0.51
SMARCA4P51532 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SMARCA4P51532 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC11.88□□□□□ -0.51
SMARCA4P51532 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC11.88□□□□□ -0.51
SMARCA4P51532 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC11.88□□□□□ -0.51
SMARCA4P51532 SEMA4D-202ENST00000356444 4503 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SMARCA4P51532 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SMARCA4P51532 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC11.88□□□□□ -0.51
SMARCA4P51532 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SMARCA4P51532 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC11.87□□□□□ -0.51
SMARCA4P51532 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMARCA4P51532 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC11.87□□□□□ -0.51
SMARCA4P51532 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SMARCA4P51532 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMARCA4P51532 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC11.87□□□□□ -0.51
SMARCA4P51532 MIR130B-202ENST00000385018 82 ntBASIC11.87□□□□□ -0.51
SMARCA4P51532 AC011352.2-201ENST00000514574 1016 ntBASIC11.87□□□□□ -0.51
SMARCA4P51532 RNA5SP340-201ENST00000517132 107 ntBASIC11.87□□□□□ -0.51
SMARCA4P51532 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC11.87□□□□□ -0.51
SMARCA4P51532 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC11.87□□□□□ -0.51
SMARCA4P51532 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SMARCA4P51532 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMARCA4P51532 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
SMARCA4P51532 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SMARCA4P51532 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SMARCA4P51532 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC11.87□□□□□ -0.51
SMARCA4P51532 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SMARCA4P51532 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMARCA4P51532 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SMARCA4P51532 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SMARCA4P51532 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC11.86□□□□□ -0.51
SMARCA4P51532 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SMARCA4P51532 NPM1P19-201ENST00000450070 712 ntBASIC11.86□□□□□ -0.51
SMARCA4P51532 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
SMARCA4P51532 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC11.86□□□□□ -0.51
SMARCA4P51532 FAM27E2-201ENST00000619668 403 ntBASIC11.86□□□□□ -0.51
SMARCA4P51532 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC11.86□□□□□ -0.51
SMARCA4P51532 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC11.86□□□□□ -0.51
SMARCA4P51532 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC11.86□□□□□ -0.51
SMARCA4P51532 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC11.86□□□□□ -0.51
SMARCA4P51532 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SMARCA4P51532 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 RNA5SP477-201ENST00000362639 119 ntBASIC11.86□□□□□ -0.51
SMARCA4P51532 AC087752.1-201ENST00000391360 558 ntBASIC11.86□□□□□ -0.51
SMARCA4P51532 RN7SKP271-201ENST00000410528 320 ntBASIC11.86□□□□□ -0.51
SMARCA4P51532 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC11.86□□□□□ -0.51
SMARCA4P51532 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC11.86□□□□□ -0.51
SMARCA4P51532 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC11.86□□□□□ -0.51
SMARCA4P51532 AC004232.1-201ENST00000571388 208 ntBASIC11.86□□□□□ -0.51
SMARCA4P51532 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC11.86□□□□□ -0.51
SMARCA4P51532 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC11.86□□□□□ -0.51
SMARCA4P51532 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMARCA4P51532 ANKRD20A11P-206ENST00000451663 3717 ntBASIC11.85□□□□□ -0.51
SMARCA4P51532 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC11.85□□□□□ -0.51
SMARCA4P51532 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
SMARCA4P51532 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC11.85□□□□□ -0.51
SMARCA4P51532 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC11.85□□□□□ -0.51
SMARCA4P51532 SMG1P5-202ENST00000529428 4219 ntBASIC11.85□□□□□ -0.51
SMARCA4P51532 SMG1P2-201ENST00000566127 4221 ntBASIC11.85□□□□□ -0.51
SMARCA4P51532 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC11.85□□□□□ -0.51
SMARCA4P51532 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC11.85□□□□□ -0.51
SMARCA4P51532 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SMARCA4P51532 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 GTF2IP6-201ENST00000583143 541 ntBASIC11.85□□□□□ -0.51
SMARCA4P51532 AC005229.3-201ENST00000603438 323 ntBASIC11.85□□□□□ -0.51
SMARCA4P51532 AL356986.1-201ENST00000604085 341 ntBASIC11.85□□□□□ -0.51
SMARCA4P51532 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SMARCA4P51532 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMARCA4P51532 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMARCA4P51532 OFD1P15Y-201ENST00000411536 1392 ntBASIC11.84□□□□□ -0.51
SMARCA4P51532 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms