RNA–Protein interactions for RNA: ENST00000356444.6

SEMA4D-202, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA4D, Length 4,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-202ENST00000356444 SUPT5HO00267 1087 aaKnown RBP16.3■□□□□ 0.2
SEMA4D-202ENST00000356444 DCAF8L2P0C7V8 631 aa16.26■□□□□ 0.19
SEMA4D-202ENST00000356444 PELP1Q8IZL8 1130 aaKnown RBP16.03■□□□□ 0.16
SEMA4D-202ENST00000356444 PCGF6Q9BYE7 350 aa15.99■□□□□ 0.15
SEMA4D-202ENST00000356444 SHROOM4Q9ULL8 1493 aa15.85■□□□□ 0.13
SEMA4D-202ENST00000356444 NISCHQ9Y2I1 1504 aa15.8■□□□□ 0.12
SEMA4D-202ENST00000356444 MYT1Q01538 1121 aa15.72■□□□□ 0.11
SEMA4D-202ENST00000356444 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
SEMA4D-202ENST00000356444 CENPBP07199 599 aaPredicted RBP15.58■□□□□ 0.08
SEMA4D-202ENST00000356444 HRCP23327 699 aa15.56■□□□□ 0.08
SEMA4D-202ENST00000356444 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
SEMA4D-202ENST00000356444 PPARGC1BQ86YN6 1023 aaKnown RBP15.36■□□□□ 0.05
SEMA4D-202ENST00000356444 FAM9AQ8IZU1 332 aaPredicted RBP15.35■□□□□ 0.05
SEMA4D-202ENST00000356444 TTBK1Q5TCY1 1321 aaPredicted RBP15.29■□□□□ 0.04
SEMA4D-202ENST00000356444 CCER1Q8TC90 406 aaPredicted RBP15.29■□□□□ 0.04
SEMA4D-202ENST00000356444 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.03
SEMA4D-202ENST00000356444 ERICH6Q7L0X2 663 aa15.21■□□□□ 0.03
SEMA4D-202ENST00000356444 TRIM26Q12899 539 aaPredicted RBP15.13■□□□□ 0.01
SEMA4D-202ENST00000356444 APLP2Q06481 763 aa15.05■□□□□ 0
SEMA4D-202ENST00000356444 TRIM41Q8WV44 630 aa14.96□□□□□ -0.01
SEMA4D-202ENST00000356444 LOC105371045A0A1W2PR82 267 aa14.94□□□□□ -0.02
SEMA4D-202ENST00000356444 NEFLP07196 543 aa14.91□□□□□ -0.02
SEMA4D-202ENST00000356444 CHIC1Q5VXU3 224 aa14.87□□□□□ -0.03
SEMA4D-202ENST00000356444 GTF3C3Q9Y5Q9 886 aa14.87□□□□□ -0.03
SEMA4D-202ENST00000356444 DIEXFQ68CQ4 756 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-202ENST00000356444 RANGAP1P46060 587 aaPredicted RBP14.73□□□□□ -0.05
SEMA4D-202ENST00000356444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
SEMA4D-202ENST00000356444 ACIN1Q9UKV3 1341 aaKnown RBP14.67□□□□□ -0.06
SEMA4D-202ENST00000356444 UBTFP17480 764 aaKnown RBP14.64□□□□□ -0.07
SEMA4D-202ENST00000356444 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
SEMA4D-202ENST00000356444 HNRNPUL2Q1KMD3 747 aaKnown RBP14.49□□□□□ -0.09
SEMA4D-202ENST00000356444 BCANQ96GW7 911 aa14.47□□□□□ -0.09
SEMA4D-202ENST00000356444 NEUROD1Q13562 356 aa14.44□□□□□ -0.1
SEMA4D-202ENST00000356444 RTL5Q5HYW3 569 aaPredicted RBP14.38□□□□□ -0.11
SEMA4D-202ENST00000356444 ATP1B4Q9UN42 357 aaPredicted RBP14.37□□□□□ -0.11
SEMA4D-202ENST00000356444 ZNF316A6NFI3 1004 aaPredicted RBP14.33□□□□□ -0.12
SEMA4D-202ENST00000356444 ITGAEP38570 1179 aa14.33□□□□□ -0.12
SEMA4D-202ENST00000356444 DAXXQ9UER7 740 aaPredicted RBP14.32□□□□□ -0.12
SEMA4D-202ENST00000356444 CNGB1Q14028 1251 aaPredicted RBP14.2□□□□□ -0.14
SEMA4D-202ENST00000356444 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
SEMA4D-202ENST00000356444 POLR3GLQ9BT43 218 aa14.13□□□□□ -0.15
SEMA4D-202ENST00000356444 FKBP8Q14318 412 aa14.07□□□□□ -0.16
SEMA4D-202ENST00000356444 EIF5BO60841 1220 aaKnown RBP14.05□□□□□ -0.16
SEMA4D-202ENST00000356444 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
SEMA4D-202ENST00000356444 CLSPNQ9HAW4 1339 aa14.02□□□□□ -0.17
SEMA4D-202ENST00000356444 ANP32EQ9BTT0 268 aa14.01□□□□□ -0.17
SEMA4D-202ENST00000356444 ANP32CO43423 234 aa14□□□□□ -0.17
SEMA4D-202ENST00000356444 MIER1Q8N108 512 aa14□□□□□ -0.17
SEMA4D-202ENST00000356444 BCL11AQ9H165 835 aa13.94□□□□□ -0.18
SEMA4D-202ENST00000356444 ANP32AP39687 249 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-202ENST00000356444 NBR1Q14596 966 aa13.9□□□□□ -0.18
SEMA4D-202ENST00000356444 MYT1LQ9UL68 1186 aa13.88□□□□□ -0.19
SEMA4D-202ENST00000356444 MYO15BQ96JP2 1530 aa13.86□□□□□ -0.19
SEMA4D-202ENST00000356444 NPM2Q86SE8 214 aaKnown RBP13.86□□□□□ -0.19
SEMA4D-202ENST00000356444 FAM50AQ14320 339 aaKnown RBP13.83□□□□□ -0.2
SEMA4D-202ENST00000356444 TRIM52Q96A61 297 aa13.81□□□□□ -0.2
SEMA4D-202ENST00000356444 DDX10Q13206 875 aaKnown RBP13.79□□□□□ -0.2
SEMA4D-202ENST00000356444 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
SEMA4D-202ENST00000356444 ZBTB47Q9UFB7 747 aaPredicted RBP13.73□□□□□ -0.21
SEMA4D-202ENST00000356444 IRX6P78412 446 aaPredicted RBP13.72□□□□□ -0.21
SEMA4D-202ENST00000356444 SUPT16HQ9Y5B9 1047 aaKnown RBP13.71□□□□□ -0.22
SEMA4D-202ENST00000356444 GLIPR1L2Q4G1C9 344 aa13.7□□□□□ -0.22
SEMA4D-202ENST00000356444 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
SEMA4D-202ENST00000356444 RTN4Q9NQC3 1192 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-202ENST00000356444 FAM9BQ8IZU0 186 aa13.62□□□□□ -0.23
SEMA4D-202ENST00000356444 CCDC136Q96JN2 1154 aa13.62□□□□□ -0.23
SEMA4D-202ENST00000356444 ZNF326Q5BKZ1 582 aaKnown RBP13.6□□□□□ -0.23
SEMA4D-202ENST00000356444 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
SEMA4D-202ENST00000356444 HIRIP3Q9BW71 556 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-202ENST00000356444 RBM19Q9Y4C8 960 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-202ENST00000356444 ARXQ96QS3 562 aa13.54□□□□□ -0.24
SEMA4D-202ENST00000356444 TSHZ2Q9NRE2 1034 aa13.54□□□□□ -0.24
SEMA4D-202ENST00000356444 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-202ENST00000356444 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-202ENST00000356444 SALL2Q9Y467 1007 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-202ENST00000356444 CANXP27824 592 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-202ENST00000356444 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
SEMA4D-202ENST00000356444 MRS2Q9HD23 443 aa13.45□□□□□ -0.26
SEMA4D-202ENST00000356444 NEFMP07197 916 aa13.44□□□□□ -0.26
SEMA4D-202ENST00000356444 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-202ENST00000356444 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
SEMA4D-202ENST00000356444 LAS1LQ9Y4W2 734 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-202ENST00000356444 P3H3Q8IVL6 736 aa13.38□□□□□ -0.27
SEMA4D-202ENST00000356444 PPP4R2Q9NY27 417 aa13.36□□□□□ -0.27
SEMA4D-202ENST00000356444 B4GALNT3Q6L9W6 998 aa13.36□□□□□ -0.27
SEMA4D-202ENST00000356444 TMC1Q8TDI8 760 aa13.35□□□□□ -0.27
SEMA4D-202ENST00000356444 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
SEMA4D-202ENST00000356444 ERICH6BQ5W0A0 696 aa13.34□□□□□ -0.27
SEMA4D-202ENST00000356444 UPF2Q9HAU5 1272 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-202ENST00000356444 SENP3-EIF4A1A0A087X0R7 540 aa13.34□□□□□ -0.27
SEMA4D-202ENST00000356444 PPM1GO15355 546 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-202ENST00000356444 HSP90AA1P07900 732 aaKnown RBP13.33□□□□□ -0.27
SEMA4D-202ENST00000356444 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
SEMA4D-202ENST00000356444 NAP1L5Q96NT1 182 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-202ENST00000356444 TRIM44Q96DX7 344 aaPredicted RBP13.23□□□□□ -0.29
SEMA4D-202ENST00000356444 CEP162Q5TB80 1403 aa13.23□□□□□ -0.29
SEMA4D-202ENST00000356444 EIF4G2P78344 907 aaKnown RBP eCLIP13.21□□□□□ -0.29
SEMA4D-202ENST00000356444 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.21□□□□□ -0.29
SEMA4D-202ENST00000356444 ZCCHC6Q5VYS8 1495 aaKnown RBP13.2□□□□□ -0.3
SEMA4D-202ENST00000356444 ARID3CA6NKF2 412 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms