RNA–Protein interactions for RNA: ENST00000531091.5

AP002004.1-203, humanhuman

TSL 1 (best) BASIC

Gene AP002004.1, Length 1,768 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002004.1-203ENST00000531091 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.85
AP002004.1-203ENST00000531091 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
AP002004.1-203ENST00000531091 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
AP002004.1-203ENST00000531091 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
AP002004.1-203ENST00000531091 FOXD1Q16676 465 aa16.23■□□□□ 0.19
AP002004.1-203ENST00000531091 POTEDQ86YR6 584 aa16.15■□□□□ 0.18
AP002004.1-203ENST00000531091 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
AP002004.1-203ENST00000531091 NISCHQ9Y2I1 1504 aa15.28■□□□□ 0.04
AP002004.1-203ENST00000531091 MSH5O43196 834 aa15.23■□□□□ 0.03
AP002004.1-203ENST00000531091 PIAS4Q8N2W9 510 aaPredicted RBP15.14■□□□□ 0.01
AP002004.1-203ENST00000531091 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
AP002004.1-203ENST00000531091 ADRA2BP18089 450 aa15.07■□□□□ 0
AP002004.1-203ENST00000531091 KCNA4P22459 653 aa14.39□□□□□ -0.11
AP002004.1-203ENST00000531091 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
AP002004.1-203ENST00000531091 EHMT2Q96KQ7 1210 aa13.99□□□□□ -0.17
AP002004.1-203ENST00000531091 NCBP3Q53F19 620 aaKnown RBP13.9□□□□□ -0.18
AP002004.1-203ENST00000531091 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
AP002004.1-203ENST00000531091 MAPK8IP2Q13387 824 aaPredicted RBP13.85□□□□□ -0.19
AP002004.1-203ENST00000531091 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
AP002004.1-203ENST00000531091 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
AP002004.1-203ENST00000531091 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
AP002004.1-203ENST00000531091 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
AP002004.1-203ENST00000531091 CCDC180Q9P1Z9 1646 aa13.58□□□□□ -0.24
AP002004.1-203ENST00000531091 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
AP002004.1-203ENST00000531091 ABCC9O60706 1549 aa13.51□□□□□ -0.25
AP002004.1-203ENST00000531091 HOXD11P31277 338 aaPredicted RBP13.3□□□□□ -0.28
AP002004.1-203ENST00000531091 ZBTB22O15209 634 aa13.26□□□□□ -0.29
AP002004.1-203ENST00000531091 RNF216Q9NWF9 866 aaPredicted RBP13.25□□□□□ -0.29
AP002004.1-203ENST00000531091 DCAF8L1A6NGE4 600 aa13.19□□□□□ -0.3
AP002004.1-203ENST00000531091 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
AP002004.1-203ENST00000531091 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
AP002004.1-203ENST00000531091 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
AP002004.1-203ENST00000531091 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
AP002004.1-203ENST00000531091 RNF39Q9H2S5 420 aa12.98□□□□□ -0.33
AP002004.1-203ENST00000531091 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.34
AP002004.1-203ENST00000531091 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
AP002004.1-203ENST00000531091 NACADO15069 1562 aa12.85□□□□□ -0.35
AP002004.1-203ENST00000531091 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
AP002004.1-203ENST00000531091 MYO15BQ96JP2 1530 aa12.68□□□□□ -0.38
AP002004.1-203ENST00000531091 ZCCHC6Q5VYS8 1495 aaKnown RBP12.67□□□□□ -0.38
AP002004.1-203ENST00000531091 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
AP002004.1-203ENST00000531091 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
AP002004.1-203ENST00000531091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
AP002004.1-203ENST00000531091 DCAF1Q9Y4B6 1507 aa12.59□□□□□ -0.39
AP002004.1-203ENST00000531091 UNC13AQ9UPW8 1703 aa12.55□□□□□ -0.4
AP002004.1-203ENST00000531091 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
AP002004.1-203ENST00000531091 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
AP002004.1-203ENST00000531091 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
AP002004.1-203ENST00000531091 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
AP002004.1-203ENST00000531091 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
AP002004.1-203ENST00000531091 SHROOM4Q9ULL8 1493 aa12.31□□□□□ -0.44
AP002004.1-203ENST00000531091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
AP002004.1-203ENST00000531091 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
AP002004.1-203ENST00000531091 SAMD1Q6SPF0 538 aaPredicted RBP12.28□□□□□ -0.44
AP002004.1-203ENST00000531091 FKBP8Q14318 412 aa12.25□□□□□ -0.45
AP002004.1-203ENST00000531091 POTEHQ6S545 545 aa12.2□□□□□ -0.46
AP002004.1-203ENST00000531091 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
AP002004.1-203ENST00000531091 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
AP002004.1-203ENST00000531091 CAPN15O75808 1086 aa12.18□□□□□ -0.46
AP002004.1-203ENST00000531091 CC2D2AQ9P2K1 1620 aa12.17□□□□□ -0.46
AP002004.1-203ENST00000531091 DSG3P32926 999 aa12.14□□□□□ -0.47
AP002004.1-203ENST00000531091 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
AP002004.1-203ENST00000531091 APLP2Q06481 763 aa12.07□□□□□ -0.48
AP002004.1-203ENST00000531091 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
AP002004.1-203ENST00000531091 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
AP002004.1-203ENST00000531091 TRHP20396 242 aaPredicted RBP11.96□□□□□ -0.49
AP002004.1-203ENST00000531091 AMER1Q5JTC6 1135 aaPredicted RBP11.92□□□□□ -0.5
AP002004.1-203ENST00000531091 ABCB7O75027 752 aa11.87□□□□□ -0.51
AP002004.1-203ENST00000531091 NCAPD3P42695 1498 aa11.87□□□□□ -0.51
AP002004.1-203ENST00000531091 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
AP002004.1-203ENST00000531091 ATAD2BQ9ULI0 1458 aa11.86□□□□□ -0.51
AP002004.1-203ENST00000531091 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
AP002004.1-203ENST00000531091 SMARCA2P51531 1590 aa11.83□□□□□ -0.52
AP002004.1-203ENST00000531091 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
AP002004.1-203ENST00000531091 POLA2Q14181 598 aa11.79□□□□□ -0.52
AP002004.1-203ENST00000531091 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
AP002004.1-203ENST00000531091 BAZ1BQ9UIG0 1483 aaKnown RBP11.77□□□□□ -0.53
AP002004.1-203ENST00000531091 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
AP002004.1-203ENST00000531091 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
AP002004.1-203ENST00000531091 FBLN2P98095 1184 aa11.74□□□□□ -0.53
AP002004.1-203ENST00000531091 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.53
AP002004.1-203ENST00000531091 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
AP002004.1-203ENST00000531091 WIZO95785 1651 aa11.65□□□□□ -0.55
AP002004.1-203ENST00000531091 NESP48681 1621 aa11.64□□□□□ -0.55
AP002004.1-203ENST00000531091 FBXO3Q9UK99 471 aa11.62□□□□□ -0.55
AP002004.1-203ENST00000531091 RSF1Q96T23 1441 aaPredicted RBP11.61□□□□□ -0.55
AP002004.1-203ENST00000531091 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
AP002004.1-203ENST00000531091 PROM2Q8N271 834 aa11.57□□□□□ -0.56
AP002004.1-203ENST00000531091 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
AP002004.1-203ENST00000531091 SLC24A1O60721 1099 aa11.55□□□□□ -0.56
AP002004.1-203ENST00000531091 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
AP002004.1-203ENST00000531091 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
AP002004.1-203ENST00000531091 CUX2O14529 1486 aa11.54□□□□□ -0.56
AP002004.1-203ENST00000531091 PDS5BQ9NTI5 1447 aa11.53□□□□□ -0.56
AP002004.1-203ENST00000531091 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
AP002004.1-203ENST00000531091 VASPP50552 380 aaPredicted RBP11.47□□□□□ -0.57
AP002004.1-203ENST00000531091 KIF21AQ7Z4S6 1674 aa11.45□□□□□ -0.58
AP002004.1-203ENST00000531091 THOC2Q8NI27 1593 aaKnown RBP11.43□□□□□ -0.58
AP002004.1-203ENST00000531091 CFTRP13569 1480 aa11.41□□□□□ -0.58
AP002004.1-203ENST00000531091 CCDC88BA6NC98 1476 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms