RNA–Protein interactions for RNA: ENST00000560585.5

GCNT3-209, Transcript of glucosaminyl (N-acetyl) transferase 3, mucin type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCNT3, Length 2,360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT3-209ENST00000560585 NISCHQ9Y2I1 1504 aa15.31■□□□□ 0.04
GCNT3-209ENST00000560585 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
GCNT3-209ENST00000560585 ABCC9O60706 1549 aa13.27□□□□□ -0.28
GCNT3-209ENST00000560585 SHROOM4Q9ULL8 1493 aa13.1□□□□□ -0.31
GCNT3-209ENST00000560585 HRCP23327 699 aa13.07□□□□□ -0.32
GCNT3-209ENST00000560585 ZCCHC6Q5VYS8 1495 aaKnown RBP13.02□□□□□ -0.33
GCNT3-209ENST00000560585 AEBP2Q6ZN18 517 aaPredicted RBP12.98□□□□□ -0.33
GCNT3-209ENST00000560585 SUPT5HO00267 1087 aaKnown RBP12.94□□□□□ -0.34
GCNT3-209ENST00000560585 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
GCNT3-209ENST00000560585 PELP1Q8IZL8 1130 aaKnown RBP12.79□□□□□ -0.36
GCNT3-209ENST00000560585 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
GCNT3-209ENST00000560585 PPARGC1BQ86YN6 1023 aaKnown RBP12.74□□□□□ -0.37
GCNT3-209ENST00000560585 CHIC1Q5VXU3 224 aa12.72□□□□□ -0.37
GCNT3-209ENST00000560585 RB1CC1Q8TDY2 1594 aa12.69□□□□□ -0.38
GCNT3-209ENST00000560585 NACADO15069 1562 aa12.69□□□□□ -0.38
GCNT3-209ENST00000560585 PCGF6Q9BYE7 350 aa12.68□□□□□ -0.38
GCNT3-209ENST00000560585 DCAF1Q9Y4B6 1507 aa12.61□□□□□ -0.39
GCNT3-209ENST00000560585 UNC13AQ9UPW8 1703 aa12.52□□□□□ -0.41
GCNT3-209ENST00000560585 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
GCNT3-209ENST00000560585 SCRIBQ14160 1630 aa12.42□□□□□ -0.42
GCNT3-209ENST00000560585 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
GCNT3-209ENST00000560585 BICRAQ9NZM4 1560 aa12.4□□□□□ -0.42
GCNT3-209ENST00000560585 MYT1Q01538 1121 aa12.34□□□□□ -0.43
GCNT3-209ENST00000560585 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
GCNT3-209ENST00000560585 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
GCNT3-209ENST00000560585 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
GCNT3-209ENST00000560585 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
GCNT3-209ENST00000560585 RSF1Q96T23 1441 aaPredicted RBP12.18□□□□□ -0.46
GCNT3-209ENST00000560585 ACIN1Q9UKV3 1341 aaKnown RBP12.09□□□□□ -0.47
GCNT3-209ENST00000560585 TRIM41Q8WV44 630 aa12.07□□□□□ -0.48
GCNT3-209ENST00000560585 EIF4G1Q04637 1599 aaKnown RBP12.03□□□□□ -0.48
GCNT3-209ENST00000560585 NEUROD1Q13562 356 aa12.03□□□□□ -0.48
GCNT3-209ENST00000560585 CECR2Q9BXF3 1484 aa11.99□□□□□ -0.49
GCNT3-209ENST00000560585 CC2D2AQ9P2K1 1620 aa11.98□□□□□ -0.49
GCNT3-209ENST00000560585 GTF3C3Q9Y5Q9 886 aa11.96□□□□□ -0.49
GCNT3-209ENST00000560585 FAM9AQ8IZU1 332 aaPredicted RBP11.92□□□□□ -0.5
GCNT3-209ENST00000560585 MROH2BQ7Z745 1585 aa11.89□□□□□ -0.51
GCNT3-209ENST00000560585 CENPBP07199 599 aaPredicted RBP11.89□□□□□ -0.51
GCNT3-209ENST00000560585 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
GCNT3-209ENST00000560585 WIZO95785 1651 aa11.85□□□□□ -0.51
GCNT3-209ENST00000560585 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
GCNT3-209ENST00000560585 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
GCNT3-209ENST00000560585 ATAD2BQ9ULI0 1458 aa11.79□□□□□ -0.52
GCNT3-209ENST00000560585 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.52
GCNT3-209ENST00000560585 NCAPD3P42695 1498 aa11.75□□□□□ -0.53
GCNT3-209ENST00000560585 WRNQ14191 1432 aaPredicted RBP eCLIP11.72□□□□□ -0.53
GCNT3-209ENST00000560585 SMARCA2P51531 1590 aa11.71□□□□□ -0.53
GCNT3-209ENST00000560585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.54
GCNT3-209ENST00000560585 PEG3Q9GZU2 1588 aa11.7□□□□□ -0.54
GCNT3-209ENST00000560585 CCER1Q8TC90 406 aaPredicted RBP11.7□□□□□ -0.54
GCNT3-209ENST00000560585 TOP2AP11388 1531 aaKnown RBP11.7□□□□□ -0.54
GCNT3-209ENST00000560585 BAZ1BQ9UIG0 1483 aaKnown RBP11.66□□□□□ -0.54
GCNT3-209ENST00000560585 HMGXB3Q12766 1538 aa11.66□□□□□ -0.54
GCNT3-209ENST00000560585 ABCC8Q09428 1581 aa11.64□□□□□ -0.55
GCNT3-209ENST00000560585 CEP162Q5TB80 1403 aa11.64□□□□□ -0.55
GCNT3-209ENST00000560585 CCDC88BA6NC98 1476 aa11.64□□□□□ -0.55
GCNT3-209ENST00000560585 TTBK1Q5TCY1 1321 aaPredicted RBP11.62□□□□□ -0.55
GCNT3-209ENST00000560585 EEA1Q15075 1411 aa11.61□□□□□ -0.55
GCNT3-209ENST00000560585 TNIKQ9UKE5 1360 aa11.61□□□□□ -0.55
GCNT3-209ENST00000560585 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
GCNT3-209ENST00000560585 SOGA1O94964 1423 aa11.56□□□□□ -0.56
GCNT3-209ENST00000560585 YTHDC1Q96MU7 727 aaKnown RBP11.55□□□□□ -0.56
GCNT3-209ENST00000560585 NESP48681 1621 aa11.54□□□□□ -0.56
GCNT3-209ENST00000560585 GOLGA3Q08378 1498 aa11.52□□□□□ -0.57
GCNT3-209ENST00000560585 CSRNP3Q8WYN3 585 aa11.5□□□□□ -0.57
GCNT3-209ENST00000560585 MIER1Q8N108 512 aa11.49□□□□□ -0.57
GCNT3-209ENST00000560585 BCL11AQ9H165 835 aa11.49□□□□□ -0.57
GCNT3-209ENST00000560585 RUSC2Q8N2Y8 1516 aa11.48□□□□□ -0.57
GCNT3-209ENST00000560585 ANP32EQ9BTT0 268 aa11.46□□□□□ -0.58
GCNT3-209ENST00000560585 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
GCNT3-209ENST00000560585 KIF21BO75037 1637 aa11.45□□□□□ -0.58
GCNT3-209ENST00000560585 CEP164Q9UPV0 1460 aa11.43□□□□□ -0.58
GCNT3-209ENST00000560585 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
GCNT3-209ENST00000560585 LAMC3Q9Y6N6 1575 aa11.4□□□□□ -0.58
GCNT3-209ENST00000560585 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.59
GCNT3-209ENST00000560585 SYNJ1O43426 1573 aa11.39□□□□□ -0.59
GCNT3-209ENST00000560585 TSHZ2Q9NRE2 1034 aa11.38□□□□□ -0.59
GCNT3-209ENST00000560585 SUPT16HQ9Y5B9 1047 aaKnown RBP11.38□□□□□ -0.59
GCNT3-209ENST00000560585 CLIP1P30622 1438 aa11.37□□□□□ -0.59
GCNT3-209ENST00000560585 VPS8Q8N3P4 1428 aa11.37□□□□□ -0.59
GCNT3-209ENST00000560585 ERCC6Q03468 1493 aa11.36□□□□□ -0.59
GCNT3-209ENST00000560585 KIF21AQ7Z4S6 1674 aa11.36□□□□□ -0.59
GCNT3-209ENST00000560585 CFTRP13569 1480 aa11.36□□□□□ -0.59
GCNT3-209ENST00000560585 PDS5BQ9NTI5 1447 aa11.32□□□□□ -0.6
GCNT3-209ENST00000560585 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
GCNT3-209ENST00000560585 FANCD2Q9BXW9 1451 aa11.29□□□□□ -0.6
GCNT3-209ENST00000560585 SENP3Q9H4L4 574 aaPredicted RBP11.29□□□□□ -0.6
GCNT3-209ENST00000560585 RAPGEF2Q9Y4G8 1499 aa11.29□□□□□ -0.6
GCNT3-209ENST00000560585 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.61
GCNT3-209ENST00000560585 APLP2Q06481 763 aa11.26□□□□□ -0.61
GCNT3-209ENST00000560585 TOP2BQ02880 1626 aa11.25□□□□□ -0.61
GCNT3-209ENST00000560585 PRDM2Q13029 1718 aa11.25□□□□□ -0.61
GCNT3-209ENST00000560585 ERICH3Q5RHP9 1530 aa11.23□□□□□ -0.61
GCNT3-209ENST00000560585 BIVM-ERCC5R4GMW8 1640 aa11.22□□□□□ -0.61
GCNT3-209ENST00000560585 MRC2Q9UBG0 1479 aa11.21□□□□□ -0.61
GCNT3-209ENST00000560585 URB2Q14146 1524 aaKnown RBP11.2□□□□□ -0.62
GCNT3-209ENST00000560585 DHX57Q6P158 1386 aaKnown RBP11.19□□□□□ -0.62
GCNT3-209ENST00000560585 CUX2O14529 1486 aa11.18□□□□□ -0.62
GCNT3-209ENST00000560585 ARAP1Q96P48 1450 aa11.18□□□□□ -0.62
GCNT3-209ENST00000560585 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms