RNA–Protein interactions for RNA: ENST00000591497.5

PTPN2-212, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5 BASIC

Gene PTPN2, Length 3,390 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-212ENST00000591497 NISCHQ9Y2I1 1504 aa15.38■□□□□ 0.05
PTPN2-212ENST00000591497 CCDC180Q9P1Z9 1646 aa13.77□□□□□ -0.2
PTPN2-212ENST00000591497 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
PTPN2-212ENST00000591497 DCAF1Q9Y4B6 1507 aa13.01□□□□□ -0.33
PTPN2-212ENST00000591497 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
PTPN2-212ENST00000591497 ZCCHC6Q5VYS8 1495 aaKnown RBP12.94□□□□□ -0.34
PTPN2-212ENST00000591497 NACADO15069 1562 aa12.77□□□□□ -0.36
PTPN2-212ENST00000591497 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
PTPN2-212ENST00000591497 CHIC1Q5VXU3 224 aa12.6□□□□□ -0.39
PTPN2-212ENST00000591497 ABCC9O60706 1549 aa12.58□□□□□ -0.4
PTPN2-212ENST00000591497 SHROOM4Q9ULL8 1493 aa12.44□□□□□ -0.42
PTPN2-212ENST00000591497 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
PTPN2-212ENST00000591497 SCRIBQ14160 1630 aa12.2□□□□□ -0.46
PTPN2-212ENST00000591497 UNC13AQ9UPW8 1703 aa12.2□□□□□ -0.46
PTPN2-212ENST00000591497 DCAF8L2P0C7V8 631 aa12.19□□□□□ -0.46
PTPN2-212ENST00000591497 PLPPR3Q6T4P5 718 aa12.13□□□□□ -0.47
PTPN2-212ENST00000591497 BICRAQ9NZM4 1560 aa12.06□□□□□ -0.48
PTPN2-212ENST00000591497 BAZ1AQ9NRL2 1556 aaPredicted RBP11.99□□□□□ -0.49
PTPN2-212ENST00000591497 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
PTPN2-212ENST00000591497 AEBP2Q6ZN18 517 aaPredicted RBP11.9□□□□□ -0.51
PTPN2-212ENST00000591497 PEG3Q9GZU2 1588 aa11.89□□□□□ -0.51
PTPN2-212ENST00000591497 SMARCA4P51532 1647 aa11.87□□□□□ -0.51
PTPN2-212ENST00000591497 SMARCA2P51531 1590 aa11.83□□□□□ -0.52
PTPN2-212ENST00000591497 DAXXQ9UER7 740 aaPredicted RBP11.81□□□□□ -0.52
PTPN2-212ENST00000591497 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
PTPN2-212ENST00000591497 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
PTPN2-212ENST00000591497 EIF4G1Q04637 1599 aaKnown RBP11.75□□□□□ -0.53
PTPN2-212ENST00000591497 TOP2AP11388 1531 aaKnown RBP11.72□□□□□ -0.53
PTPN2-212ENST00000591497 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
PTPN2-212ENST00000591497 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
PTPN2-212ENST00000591497 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
PTPN2-212ENST00000591497 NCBP3Q53F19 620 aaKnown RBP11.67□□□□□ -0.54
PTPN2-212ENST00000591497 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
PTPN2-212ENST00000591497 PABPN1Q86U42 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTPN2-212ENST00000591497 WIZO95785 1651 aa11.6□□□□□ -0.55
PTPN2-212ENST00000591497 BAZ1BQ9UIG0 1483 aaKnown RBP11.6□□□□□ -0.55
PTPN2-212ENST00000591497 CC2D2AQ9P2K1 1620 aa11.55□□□□□ -0.56
PTPN2-212ENST00000591497 KCNA4P22459 653 aa11.55□□□□□ -0.56
PTPN2-212ENST00000591497 PRKCSHP14314 528 aaPredicted RBP11.51□□□□□ -0.57
PTPN2-212ENST00000591497 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
PTPN2-212ENST00000591497 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
PTPN2-212ENST00000591497 PHF23Q9BUL5 403 aaPredicted RBP11.46□□□□□ -0.57
PTPN2-212ENST00000591497 SUPT5HO00267 1087 aaKnown RBP11.42□□□□□ -0.58
PTPN2-212ENST00000591497 AMER1Q5JTC6 1135 aaPredicted RBP11.42□□□□□ -0.58
PTPN2-212ENST00000591497 CCDC88BA6NC98 1476 aa11.39□□□□□ -0.59
PTPN2-212ENST00000591497 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
PTPN2-212ENST00000591497 CFTRP13569 1480 aa11.33□□□□□ -0.6
PTPN2-212ENST00000591497 APLP2Q06481 763 aa11.27□□□□□ -0.6
PTPN2-212ENST00000591497 ABCC8Q09428 1581 aa11.27□□□□□ -0.61
PTPN2-212ENST00000591497 CADPSQ9ULU8 1353 aa11.27□□□□□ -0.61
PTPN2-212ENST00000591497 TIMELESSQ9UNS1 1208 aa11.25□□□□□ -0.61
PTPN2-212ENST00000591497 PDS5BQ9NTI5 1447 aa11.22□□□□□ -0.61
PTPN2-212ENST00000591497 BIVM-ERCC5R4GMW8 1640 aa11.21□□□□□ -0.61
PTPN2-212ENST00000591497 WDR97A6NE52 1622 aa11.17□□□□□ -0.62
PTPN2-212ENST00000591497 EEA1Q15075 1411 aa11.17□□□□□ -0.62
PTPN2-212ENST00000591497 TOP2BQ02880 1626 aa11.16□□□□□ -0.62
PTPN2-212ENST00000591497 CEP164Q9UPV0 1460 aa11.14□□□□□ -0.63
PTPN2-212ENST00000591497 DNMBPQ6XZF7 1577 aa11.13□□□□□ -0.63
PTPN2-212ENST00000591497 WRNQ14191 1432 aaPredicted RBP eCLIP11.13□□□□□ -0.63
PTPN2-212ENST00000591497 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
PTPN2-212ENST00000591497 ARXQ96QS3 562 aa11.1□□□□□ -0.63
PTPN2-212ENST00000591497 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
PTPN2-212ENST00000591497 WDR62O43379 1518 aa11.05□□□□□ -0.64
PTPN2-212ENST00000591497 KIF21AQ7Z4S6 1674 aa11.03□□□□□ -0.64
PTPN2-212ENST00000591497 SYNJ1O43426 1573 aa11.02□□□□□ -0.65
PTPN2-212ENST00000591497 CUX1P39880 1505 aa11.01□□□□□ -0.65
PTPN2-212ENST00000591497 TOPBP1Q92547 1522 aa11□□□□□ -0.65
PTPN2-212ENST00000591497 TULP1O00294 542 aaPredicted RBP10.99□□□□□ -0.65
PTPN2-212ENST00000591497 THOC2Q8NI27 1593 aaKnown RBP10.99□□□□□ -0.65
PTPN2-212ENST00000591497 TAOK2Q9UL54 1235 aa10.99□□□□□ -0.65
PTPN2-212ENST00000591497 TTBK1Q5TCY1 1321 aaPredicted RBP10.98□□□□□ -0.65
PTPN2-212ENST00000591497 TRIM41Q8WV44 630 aa10.98□□□□□ -0.65
PTPN2-212ENST00000591497 ABCA10Q8WWZ4 1543 aa10.96□□□□□ -0.65
PTPN2-212ENST00000591497 NESP48681 1621 aa10.96□□□□□ -0.66
PTPN2-212ENST00000591497 DNAJC5BQ9UF47 199 aa10.95□□□□□ -0.66
PTPN2-212ENST00000591497 ERCC6Q03468 1493 aa10.95□□□□□ -0.66
PTPN2-212ENST00000591497 IFT140Q96RY7 1462 aa10.95□□□□□ -0.66
PTPN2-212ENST00000591497 KIF21BO75037 1637 aa10.94□□□□□ -0.66
PTPN2-212ENST00000591497 URB2Q14146 1524 aaKnown RBP10.93□□□□□ -0.66
PTPN2-212ENST00000591497 CUL7Q14999 1698 aa10.93□□□□□ -0.66
PTPN2-212ENST00000591497 KIF27Q86VH2 1401 aa10.93□□□□□ -0.66
PTPN2-212ENST00000591497 FGD5Q6ZNL6 1462 aa10.93□□□□□ -0.66
PTPN2-212ENST00000591497 PELP1Q8IZL8 1130 aaKnown RBP10.93□□□□□ -0.66
PTPN2-212ENST00000591497 ERICH3Q5RHP9 1530 aa10.92□□□□□ -0.66
PTPN2-212ENST00000591497 CUX2O14529 1486 aa10.91□□□□□ -0.66
PTPN2-212ENST00000591497 POLA1P09884 1462 aaPredicted RBP10.9□□□□□ -0.66
PTPN2-212ENST00000591497 ABCA5Q8WWZ7 1642 aa10.89□□□□□ -0.67
PTPN2-212ENST00000591497 TARBP1Q13395 1621 aaKnown RBP10.89□□□□□ -0.67
PTPN2-212ENST00000591497 ERICH6Q7L0X2 663 aa10.87□□□□□ -0.67
PTPN2-212ENST00000591497 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
PTPN2-212ENST00000591497 SOGA1O94964 1423 aa10.85□□□□□ -0.67
PTPN2-212ENST00000591497 MYT1Q01538 1121 aa10.84□□□□□ -0.67
PTPN2-212ENST00000591497 GOLGA3Q08378 1498 aa10.83□□□□□ -0.68
PTPN2-212ENST00000591497 PBRM1Q86U86 1689 aa10.81□□□□□ -0.68
PTPN2-212ENST00000591497 TPRNQ4KMQ1 711 aa10.8□□□□□ -0.68
PTPN2-212ENST00000591497 PRXQ9BXM0 1461 aa10.79□□□□□ -0.68
PTPN2-212ENST00000591497 GRIN2BQ13224 1484 aa10.79□□□□□ -0.68
PTPN2-212ENST00000591497 MAGI1Q96QZ7 1491 aaPredicted RBP10.79□□□□□ -0.68
PTPN2-212ENST00000591497 GAPVD1Q14C86 1478 aa10.77□□□□□ -0.68
PTPN2-212ENST00000591497 ADAMTS12P58397 1594 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms