RNA–Protein interactions for RNA: ENST00000431979.1

LINC01087-201, Transcript of long intergenic non-protein coding RNA 1087, humanhuman

TSL 1 (best) BASIC

Gene LINC01087, Length 3,516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01087-201ENST00000431979 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
LINC01087-201ENST00000431979 CCDC180Q9P1Z9 1646 aa13.51□□□□□ -0.25
LINC01087-201ENST00000431979 ZCCHC6Q5VYS8 1495 aaKnown RBP13.19□□□□□ -0.3
LINC01087-201ENST00000431979 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
LINC01087-201ENST00000431979 MYO15BQ96JP2 1530 aa12.7□□□□□ -0.38
LINC01087-201ENST00000431979 ABCC9O60706 1549 aa12.48□□□□□ -0.41
LINC01087-201ENST00000431979 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
LINC01087-201ENST00000431979 NACADO15069 1562 aa12.29□□□□□ -0.44
LINC01087-201ENST00000431979 SCRIBQ14160 1630 aa12.17□□□□□ -0.46
LINC01087-201ENST00000431979 EIF4G1Q04637 1599 aaKnown RBP12.14□□□□□ -0.47
LINC01087-201ENST00000431979 UNC13AQ9UPW8 1703 aa12.11□□□□□ -0.47
LINC01087-201ENST00000431979 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
LINC01087-201ENST00000431979 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
LINC01087-201ENST00000431979 CHIC1Q5VXU3 224 aa12.06□□□□□ -0.48
LINC01087-201ENST00000431979 AEBP2Q6ZN18 517 aaPredicted RBP12.02□□□□□ -0.49
LINC01087-201ENST00000431979 SUPT5HO00267 1087 aaKnown RBP12.02□□□□□ -0.49
LINC01087-201ENST00000431979 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
LINC01087-201ENST00000431979 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
LINC01087-201ENST00000431979 WIZO95785 1651 aa11.91□□□□□ -0.5
LINC01087-201ENST00000431979 CECR2Q9BXF3 1484 aa11.91□□□□□ -0.5
LINC01087-201ENST00000431979 PEG3Q9GZU2 1588 aa11.87□□□□□ -0.51
LINC01087-201ENST00000431979 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
LINC01087-201ENST00000431979 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
LINC01087-201ENST00000431979 TOP2AP11388 1531 aaKnown RBP11.83□□□□□ -0.52
LINC01087-201ENST00000431979 SMARCA2P51531 1590 aa11.76□□□□□ -0.53
LINC01087-201ENST00000431979 DCAF8L2P0C7V8 631 aa11.76□□□□□ -0.53
LINC01087-201ENST00000431979 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
LINC01087-201ENST00000431979 HRCP23327 699 aa11.53□□□□□ -0.56
LINC01087-201ENST00000431979 ABCC8Q09428 1581 aa11.47□□□□□ -0.57
LINC01087-201ENST00000431979 LOC105371045A0A1W2PR82 267 aa11.46□□□□□ -0.58
LINC01087-201ENST00000431979 BIVM-ERCC5R4GMW8 1640 aa11.45□□□□□ -0.58
LINC01087-201ENST00000431979 PRDM2Q13029 1718 aa11.45□□□□□ -0.58
LINC01087-201ENST00000431979 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
LINC01087-201ENST00000431979 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
LINC01087-201ENST00000431979 HMGXB3Q12766 1538 aa11.43□□□□□ -0.58
LINC01087-201ENST00000431979 SYNJ1O43426 1573 aa11.42□□□□□ -0.58
LINC01087-201ENST00000431979 KIF21BO75037 1637 aa11.42□□□□□ -0.58
LINC01087-201ENST00000431979 EEA1Q15075 1411 aa11.38□□□□□ -0.59
LINC01087-201ENST00000431979 TOP2BQ02880 1626 aa11.37□□□□□ -0.59
LINC01087-201ENST00000431979 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
LINC01087-201ENST00000431979 TRIM26Q12899 539 aaPredicted RBP11.31□□□□□ -0.6
LINC01087-201ENST00000431979 NCAPD3P42695 1498 aa11.31□□□□□ -0.6
LINC01087-201ENST00000431979 SOGA1O94964 1423 aa11.28□□□□□ -0.6
LINC01087-201ENST00000431979 RUSC2Q8N2Y8 1516 aa11.28□□□□□ -0.6
LINC01087-201ENST00000431979 BAZ1BQ9UIG0 1483 aaKnown RBP11.27□□□□□ -0.6
LINC01087-201ENST00000431979 TNIKQ9UKE5 1360 aa11.27□□□□□ -0.61
LINC01087-201ENST00000431979 PCGF6Q9BYE7 350 aa11.26□□□□□ -0.61
LINC01087-201ENST00000431979 ERICH3Q5RHP9 1530 aa11.22□□□□□ -0.61
LINC01087-201ENST00000431979 GOLGA3Q08378 1498 aa11.2□□□□□ -0.62
LINC01087-201ENST00000431979 CEP162Q5TB80 1403 aa11.2□□□□□ -0.62
LINC01087-201ENST00000431979 CFTRP13569 1480 aa11.18□□□□□ -0.62
LINC01087-201ENST00000431979 CUX1P39880 1505 aa11.18□□□□□ -0.62
LINC01087-201ENST00000431979 CEP164Q9UPV0 1460 aa11.17□□□□□ -0.62
LINC01087-201ENST00000431979 PRXQ9BXM0 1461 aa11.15□□□□□ -0.62
LINC01087-201ENST00000431979 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
LINC01087-201ENST00000431979 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC01087-201ENST00000431979 WDR97A6NE52 1622 aa11.09□□□□□ -0.63
LINC01087-201ENST00000431979 PPARGC1BQ86YN6 1023 aaKnown RBP11.08□□□□□ -0.64
LINC01087-201ENST00000431979 RAPGEF2Q9Y4G8 1499 aa11.07□□□□□ -0.64
LINC01087-201ENST00000431979 CSRNP3Q8WYN3 585 aa11.04□□□□□ -0.64
LINC01087-201ENST00000431979 ARAP1Q96P48 1450 aa11.03□□□□□ -0.64
LINC01087-201ENST00000431979 VPS8Q8N3P4 1428 aa11.02□□□□□ -0.64
LINC01087-201ENST00000431979 ZEB1P37275 1124 aaPredicted RBP11.02□□□□□ -0.65
LINC01087-201ENST00000431979 CC2D2AQ9P2K1 1620 aa10.99□□□□□ -0.65
LINC01087-201ENST00000431979 CLIP1P30622 1438 aa10.99□□□□□ -0.65
LINC01087-201ENST00000431979 FAM9AQ8IZU1 332 aaPredicted RBP10.99□□□□□ -0.65
LINC01087-201ENST00000431979 MAP3K1Q13233 1512 aa10.97□□□□□ -0.65
LINC01087-201ENST00000431979 CUX2O14529 1486 aa10.97□□□□□ -0.65
LINC01087-201ENST00000431979 CFAP43Q8NDM7 1665 aa10.96□□□□□ -0.66
LINC01087-201ENST00000431979 DNMBPQ6XZF7 1577 aa10.93□□□□□ -0.66
LINC01087-201ENST00000431979 ABCA5Q8WWZ7 1642 aa10.9□□□□□ -0.66
LINC01087-201ENST00000431979 CTTNBP2Q8WZ74 1663 aa10.89□□□□□ -0.67
LINC01087-201ENST00000431979 ARHGAP35Q9NRY4 1499 aa10.89□□□□□ -0.67
LINC01087-201ENST00000431979 CUL7Q14999 1698 aa10.89□□□□□ -0.67
LINC01087-201ENST00000431979 CADPSQ9ULU8 1353 aa10.88□□□□□ -0.67
LINC01087-201ENST00000431979 RRBP1Q9P2E9 1410 aaKnown RBP10.88□□□□□ -0.67
LINC01087-201ENST00000431979 ABCA10Q8WWZ4 1543 aa10.88□□□□□ -0.67
LINC01087-201ENST00000431979 LAMC3Q9Y6N6 1575 aa10.87□□□□□ -0.67
LINC01087-201ENST00000431979 KIF27Q86VH2 1401 aa10.87□□□□□ -0.67
LINC01087-201ENST00000431979 FGD5Q6ZNL6 1462 aa10.86□□□□□ -0.67
LINC01087-201ENST00000431979 LRRIQ1Q96JM4 1722 aa10.85□□□□□ -0.67
LINC01087-201ENST00000431979 MYT1Q01538 1121 aa10.84□□□□□ -0.67
LINC01087-201ENST00000431979 TIAM1Q13009 1591 aa10.84□□□□□ -0.67
LINC01087-201ENST00000431979 SAMD9Q5K651 1589 aa10.84□□□□□ -0.67
LINC01087-201ENST00000431979 KIF21AQ7Z4S6 1674 aa10.83□□□□□ -0.68
LINC01087-201ENST00000431979 IGF1RP08069 1367 aa10.82□□□□□ -0.68
LINC01087-201ENST00000431979 TOPBP1Q92547 1522 aa10.81□□□□□ -0.68
LINC01087-201ENST00000431979 TARBP1Q13395 1621 aaKnown RBP10.81□□□□□ -0.68
LINC01087-201ENST00000431979 AQRO60306 1485 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC01087-201ENST00000431979 EFCAB5A4FU69 1503 aa10.8□□□□□ -0.68
LINC01087-201ENST00000431979 FANCD2Q9BXW9 1451 aa10.79□□□□□ -0.68
LINC01087-201ENST00000431979 POLA1P09884 1462 aaPredicted RBP10.78□□□□□ -0.68
LINC01087-201ENST00000431979 PCF11O94913 1555 aaKnown RBP10.77□□□□□ -0.68
LINC01087-201ENST00000431979 URB2Q14146 1524 aaKnown RBP10.77□□□□□ -0.69
LINC01087-201ENST00000431979 THOC2Q8NI27 1593 aaKnown RBP10.74□□□□□ -0.69
LINC01087-201ENST00000431979 SNAPC4Q5SXM2 1469 aa10.74□□□□□ -0.69
LINC01087-201ENST00000431979 PBRM1Q86U86 1689 aa10.73□□□□□ -0.69
LINC01087-201ENST00000431979 ARHGEF11O15085 1522 aa10.72□□□□□ -0.69
LINC01087-201ENST00000431979 FYCO1Q9BQS8 1478 aa10.71□□□□□ -0.7
LINC01087-201ENST00000431979 MAPKBP1O60336 1514 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms