RNA–Protein interactions for RNA: ENST00000616628.1

CEP41-219, Transcript of centrosomal protein 41, humanhuman

TSL 1 (best) BASIC

Gene CEP41, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP41-219ENST00000616628 NISCHQ9Y2I1 1504 aa15.51■□□□□ 0.07
CEP41-219ENST00000616628 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
CEP41-219ENST00000616628 HRCP23327 699 aa14.55□□□□□ -0.08
CEP41-219ENST00000616628 PPARGC1BQ86YN6 1023 aaKnown RBP14.46□□□□□ -0.1
CEP41-219ENST00000616628 AEBP2Q6ZN18 517 aaPredicted RBP14.29□□□□□ -0.12
CEP41-219ENST00000616628 PCGF6Q9BYE7 350 aa14.29□□□□□ -0.12
CEP41-219ENST00000616628 CHIC1Q5VXU3 224 aa14.27□□□□□ -0.13
CEP41-219ENST00000616628 MYT1Q01538 1121 aa14.15□□□□□ -0.14
CEP41-219ENST00000616628 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
CEP41-219ENST00000616628 SUPT5HO00267 1087 aaKnown RBP13.89□□□□□ -0.19
CEP41-219ENST00000616628 SHROOM4Q9ULL8 1493 aa13.69□□□□□ -0.22
CEP41-219ENST00000616628 GTF3C3Q9Y5Q9 886 aa13.61□□□□□ -0.23
CEP41-219ENST00000616628 NEUROD1Q13562 356 aa13.58□□□□□ -0.24
CEP41-219ENST00000616628 ACIN1Q9UKV3 1341 aaKnown RBP13.57□□□□□ -0.24
CEP41-219ENST00000616628 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
CEP41-219ENST00000616628 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
CEP41-219ENST00000616628 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
CEP41-219ENST00000616628 LOC105371045A0A1W2PR82 267 aa13.46□□□□□ -0.25
CEP41-219ENST00000616628 CENPBP07199 599 aaPredicted RBP13.43□□□□□ -0.26
CEP41-219ENST00000616628 BCL11AQ9H165 835 aa13.36□□□□□ -0.27
CEP41-219ENST00000616628 CCDC180Q9P1Z9 1646 aa13.3□□□□□ -0.28
CEP41-219ENST00000616628 TTBK1Q5TCY1 1321 aaPredicted RBP13.28□□□□□ -0.28
CEP41-219ENST00000616628 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
CEP41-219ENST00000616628 FAM9AQ8IZU1 332 aaPredicted RBP13.24□□□□□ -0.29
CEP41-219ENST00000616628 DCAF1Q9Y4B6 1507 aa13.22□□□□□ -0.29
CEP41-219ENST00000616628 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
CEP41-219ENST00000616628 ZCCHC6Q5VYS8 1495 aaKnown RBP13.11□□□□□ -0.31
CEP41-219ENST00000616628 PRKCSHP14314 528 aaPredicted RBP13.1□□□□□ -0.31
CEP41-219ENST00000616628 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
CEP41-219ENST00000616628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.08□□□□□ -0.31
CEP41-219ENST00000616628 CCER1Q8TC90 406 aaPredicted RBP13.08□□□□□ -0.31
CEP41-219ENST00000616628 ANP32EQ9BTT0 268 aa13.03□□□□□ -0.32
CEP41-219ENST00000616628 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
CEP41-219ENST00000616628 PHF23Q9BUL5 403 aaPredicted RBP12.82□□□□□ -0.36
CEP41-219ENST00000616628 MIER1Q8N108 512 aa12.82□□□□□ -0.36
CEP41-219ENST00000616628 TSHZ2Q9NRE2 1034 aa12.8□□□□□ -0.36
CEP41-219ENST00000616628 DCAF8L2P0C7V8 631 aa12.78□□□□□ -0.36
CEP41-219ENST00000616628 ZNF316A6NFI3 1004 aaPredicted RBP12.76□□□□□ -0.37
CEP41-219ENST00000616628 ERICH6Q7L0X2 663 aa12.76□□□□□ -0.37
CEP41-219ENST00000616628 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
CEP41-219ENST00000616628 SUPT16HQ9Y5B9 1047 aaKnown RBP12.74□□□□□ -0.37
CEP41-219ENST00000616628 BCANQ96GW7 911 aa12.7□□□□□ -0.38
CEP41-219ENST00000616628 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
CEP41-219ENST00000616628 RBM19Q9Y4C8 960 aaKnown RBP12.5□□□□□ -0.41
CEP41-219ENST00000616628 APLP2Q06481 763 aa12.47□□□□□ -0.41
CEP41-219ENST00000616628 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
CEP41-219ENST00000616628 FKBP8Q14318 412 aa12.45□□□□□ -0.42
CEP41-219ENST00000616628 ITGAEP38570 1179 aa12.45□□□□□ -0.42
CEP41-219ENST00000616628 CCDC136Q96JN2 1154 aa12.44□□□□□ -0.42
CEP41-219ENST00000616628 SCRIBQ14160 1630 aa12.42□□□□□ -0.42
CEP41-219ENST00000616628 ABCC9O60706 1549 aa12.4□□□□□ -0.42
CEP41-219ENST00000616628 DEKP35659 375 aaKnown RBP12.38□□□□□ -0.43
CEP41-219ENST00000616628 MSH5O43196 834 aa12.38□□□□□ -0.43
CEP41-219ENST00000616628 HNRNPUL2Q1KMD3 747 aaKnown RBP12.38□□□□□ -0.43
CEP41-219ENST00000616628 SALL2Q9Y467 1007 aaPredicted RBP12.37□□□□□ -0.43
CEP41-219ENST00000616628 NEFLP07196 543 aa12.36□□□□□ -0.43
CEP41-219ENST00000616628 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.31□□□□□ -0.44
CEP41-219ENST00000616628 RTN4Q9NQC3 1192 aaKnown RBP12.3□□□□□ -0.44
CEP41-219ENST00000616628 NBR1Q14596 966 aa12.29□□□□□ -0.44
CEP41-219ENST00000616628 NACADO15069 1562 aa12.29□□□□□ -0.44
CEP41-219ENST00000616628 KCNH8Q96L42 1107 aa12.28□□□□□ -0.44
CEP41-219ENST00000616628 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
CEP41-219ENST00000616628 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
CEP41-219ENST00000616628 CDK11AQ9UQ88 783 aaPredicted RBP12.18□□□□□ -0.46
CEP41-219ENST00000616628 MYT1LQ9UL68 1186 aa12.18□□□□□ -0.46
CEP41-219ENST00000616628 TRIM52Q96A61 297 aa12.16□□□□□ -0.46
CEP41-219ENST00000616628 IRX6P78412 446 aaPredicted RBP12.15□□□□□ -0.46
CEP41-219ENST00000616628 IL27Q8NEV9 243 aa12.14□□□□□ -0.47
CEP41-219ENST00000616628 RB1CC1Q8TDY2 1594 aa12.12□□□□□ -0.47
CEP41-219ENST00000616628 CECR2Q9BXF3 1484 aa12.12□□□□□ -0.47
CEP41-219ENST00000616628 UBE2Q2Q8WVN8 375 aa12.12□□□□□ -0.47
CEP41-219ENST00000616628 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
CEP41-219ENST00000616628 RTL5Q5HYW3 569 aaPredicted RBP12.1□□□□□ -0.47
CEP41-219ENST00000616628 MROH2BQ7Z745 1585 aa12.07□□□□□ -0.48
CEP41-219ENST00000616628 ERICH6BQ5W0A0 696 aa12.07□□□□□ -0.48
CEP41-219ENST00000616628 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
CEP41-219ENST00000616628 UNC13AQ9UPW8 1703 aa12.04□□□□□ -0.48
CEP41-219ENST00000616628 DDX10Q13206 875 aaKnown RBP12.03□□□□□ -0.48
CEP41-219ENST00000616628 WIZO95785 1651 aa12.01□□□□□ -0.49
CEP41-219ENST00000616628 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
CEP41-219ENST00000616628 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
CEP41-219ENST00000616628 RANGAP1P46060 587 aaPredicted RBP11.98□□□□□ -0.49
CEP41-219ENST00000616628 PKNOX2Q96KN3 472 aa11.95□□□□□ -0.5
CEP41-219ENST00000616628 HIRIP3Q9BW71 556 aaPredicted RBP11.92□□□□□ -0.5
CEP41-219ENST00000616628 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
CEP41-219ENST00000616628 CEP162Q5TB80 1403 aa11.92□□□□□ -0.5
CEP41-219ENST00000616628 TIMELESSQ9UNS1 1208 aa11.91□□□□□ -0.5
CEP41-219ENST00000616628 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.5
CEP41-219ENST00000616628 ZBTB47Q9UFB7 747 aaPredicted RBP11.88□□□□□ -0.51
CEP41-219ENST00000616628 HNRNPUQ00839 825 aaKnown RBP eCLIP11.87□□□□□ -0.51
CEP41-219ENST00000616628 SMARCA4P51532 1647 aa11.87□□□□□ -0.51
CEP41-219ENST00000616628 ANP32CO43423 234 aa11.87□□□□□ -0.51
CEP41-219ENST00000616628 ANP32AP39687 249 aaKnown RBP11.86□□□□□ -0.51
CEP41-219ENST00000616628 BICRAQ9NZM4 1560 aa11.86□□□□□ -0.51
CEP41-219ENST00000616628 WRNQ14191 1432 aaPredicted RBP eCLIP11.85□□□□□ -0.51
CEP41-219ENST00000616628 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
CEP41-219ENST00000616628 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
CEP41-219ENST00000616628 NPM2Q86SE8 214 aaKnown RBP11.83□□□□□ -0.52
CEP41-219ENST00000616628 EIF4G1Q04637 1599 aaKnown RBP11.83□□□□□ -0.52
CEP41-219ENST00000616628 BRPF3Q9ULD4 1205 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms