RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 NISCHQ9Y2I1 1504 aa15.64■□□□□ 0.09
CCDC149-204ENST00000504487 DCAF8L2P0C7V8 631 aa15.12■□□□□ 0.01
CCDC149-204ENST00000504487 SHROOM4Q9ULL8 1493 aa14.49□□□□□ -0.09
CCDC149-204ENST00000504487 SUPT5HO00267 1087 aaKnown RBP14.31□□□□□ -0.12
CCDC149-204ENST00000504487 HRCP23327 699 aa14.22□□□□□ -0.13
CCDC149-204ENST00000504487 PCGF6Q9BYE7 350 aa14.19□□□□□ -0.14
CCDC149-204ENST00000504487 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
CCDC149-204ENST00000504487 PPARGC1BQ86YN6 1023 aaKnown RBP14.02□□□□□ -0.17
CCDC149-204ENST00000504487 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
CCDC149-204ENST00000504487 CHIC1Q5VXU3 224 aa13.66□□□□□ -0.22
CCDC149-204ENST00000504487 MYT1Q01538 1121 aa13.6□□□□□ -0.23
CCDC149-204ENST00000504487 ZEB1P37275 1124 aaPredicted RBP13.58□□□□□ -0.24
CCDC149-204ENST00000504487 TRIM26Q12899 539 aaPredicted RBP13.56□□□□□ -0.24
CCDC149-204ENST00000504487 LOC105371045A0A1W2PR82 267 aa13.53□□□□□ -0.24
CCDC149-204ENST00000504487 ABCC9O60706 1549 aa13.5□□□□□ -0.25
CCDC149-204ENST00000504487 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
CCDC149-204ENST00000504487 SCAF1Q9H7N4 1312 aaKnown RBP13.45□□□□□ -0.26
CCDC149-204ENST00000504487 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
CCDC149-204ENST00000504487 CENPBP07199 599 aaPredicted RBP13.4□□□□□ -0.26
CCDC149-204ENST00000504487 PABPN1Q86U42 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCDC149-204ENST00000504487 GTF3C3Q9Y5Q9 886 aa13.26□□□□□ -0.29
CCDC149-204ENST00000504487 CCER1Q8TC90 406 aaPredicted RBP13.25□□□□□ -0.29
CCDC149-204ENST00000504487 ACIN1Q9UKV3 1341 aaKnown RBP13.23□□□□□ -0.29
CCDC149-204ENST00000504487 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
CCDC149-204ENST00000504487 YTHDC1Q96MU7 727 aaKnown RBP13.18□□□□□ -0.3
CCDC149-204ENST00000504487 NEUROD1Q13562 356 aa13.16□□□□□ -0.3
CCDC149-204ENST00000504487 TTBK1Q5TCY1 1321 aaPredicted RBP13.16□□□□□ -0.3
CCDC149-204ENST00000504487 RANGAP1P46060 587 aaPredicted RBP13.14□□□□□ -0.31
CCDC149-204ENST00000504487 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
CCDC149-204ENST00000504487 DIEXFQ68CQ4 756 aaKnown RBP13.11□□□□□ -0.31
CCDC149-204ENST00000504487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
CCDC149-204ENST00000504487 ZCCHC6Q5VYS8 1495 aaKnown RBP12.98□□□□□ -0.33
CCDC149-204ENST00000504487 CCDC180Q9P1Z9 1646 aa12.97□□□□□ -0.33
CCDC149-204ENST00000504487 SCRIBQ14160 1630 aa12.89□□□□□ -0.35
CCDC149-204ENST00000504487 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
CCDC149-204ENST00000504487 ZNF316A6NFI3 1004 aaPredicted RBP12.78□□□□□ -0.36
CCDC149-204ENST00000504487 ATP1B4Q9UN42 357 aaPredicted RBP12.73□□□□□ -0.37
CCDC149-204ENST00000504487 APLP2Q06481 763 aa12.7□□□□□ -0.38
CCDC149-204ENST00000504487 MIER1Q8N108 512 aa12.65□□□□□ -0.38
CCDC149-204ENST00000504487 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
CCDC149-204ENST00000504487 ERICH6Q7L0X2 663 aa12.58□□□□□ -0.4
CCDC149-204ENST00000504487 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
CCDC149-204ENST00000504487 BCANQ96GW7 911 aa12.56□□□□□ -0.4
CCDC149-204ENST00000504487 ANP32EQ9BTT0 268 aa12.55□□□□□ -0.4
CCDC149-204ENST00000504487 NEFLP07196 543 aa12.53□□□□□ -0.4
CCDC149-204ENST00000504487 CECR2Q9BXF3 1484 aa12.5□□□□□ -0.41
CCDC149-204ENST00000504487 RSF1Q96T23 1441 aaPredicted RBP12.47□□□□□ -0.41
CCDC149-204ENST00000504487 RB1CC1Q8TDY2 1594 aa12.46□□□□□ -0.42
CCDC149-204ENST00000504487 CLSPNQ9HAW4 1339 aa12.45□□□□□ -0.42
CCDC149-204ENST00000504487 SUPT16HQ9Y5B9 1047 aaKnown RBP12.45□□□□□ -0.42
CCDC149-204ENST00000504487 ITGAEP38570 1179 aa12.44□□□□□ -0.42
CCDC149-204ENST00000504487 NACADO15069 1562 aa12.4□□□□□ -0.42
CCDC149-204ENST00000504487 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
CCDC149-204ENST00000504487 TSHZ2Q9NRE2 1034 aa12.37□□□□□ -0.43
CCDC149-204ENST00000504487 FKBP8Q14318 412 aa12.36□□□□□ -0.43
CCDC149-204ENST00000504487 P3H3Q8IVL6 736 aa12.31□□□□□ -0.44
CCDC149-204ENST00000504487 FBLN2P98095 1184 aa12.29□□□□□ -0.44
CCDC149-204ENST00000504487 ARID3CA6NKF2 412 aa12.27□□□□□ -0.45
CCDC149-204ENST00000504487 MROH2BQ7Z745 1585 aa12.26□□□□□ -0.45
CCDC149-204ENST00000504487 CEP162Q5TB80 1403 aa12.22□□□□□ -0.45
CCDC149-204ENST00000504487 CDK11AQ9UQ88 783 aaPredicted RBP12.19□□□□□ -0.46
CCDC149-204ENST00000504487 RBM19Q9Y4C8 960 aaKnown RBP12.19□□□□□ -0.46
CCDC149-204ENST00000504487 TRIM52Q96A61 297 aa12.15□□□□□ -0.46
CCDC149-204ENST00000504487 DDX10Q13206 875 aaKnown RBP12.14□□□□□ -0.47
CCDC149-204ENST00000504487 BAZ1BQ9UIG0 1483 aaKnown RBP12.13□□□□□ -0.47
CCDC149-204ENST00000504487 BAZ1AQ9NRL2 1556 aaPredicted RBP12.11□□□□□ -0.47
CCDC149-204ENST00000504487 WIZO95785 1651 aa12.1□□□□□ -0.47
CCDC149-204ENST00000504487 ANP32CO43423 234 aa12.1□□□□□ -0.47
CCDC149-204ENST00000504487 FAM50AQ14320 339 aaKnown RBP12.1□□□□□ -0.47
CCDC149-204ENST00000504487 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
CCDC149-204ENST00000504487 RTL5Q5HYW3 569 aaPredicted RBP12.08□□□□□ -0.48
CCDC149-204ENST00000504487 KCNH8Q96L42 1107 aa12.07□□□□□ -0.48
CCDC149-204ENST00000504487 IRX6P78412 446 aaPredicted RBP12.06□□□□□ -0.48
CCDC149-204ENST00000504487 WRNQ14191 1432 aaPredicted RBP eCLIP12.05□□□□□ -0.48
CCDC149-204ENST00000504487 NBR1Q14596 966 aa12.05□□□□□ -0.48
CCDC149-204ENST00000504487 CCDC88BA6NC98 1476 aa12.04□□□□□ -0.48
CCDC149-204ENST00000504487 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
CCDC149-204ENST00000504487 ABCC8Q09428 1581 aa12.03□□□□□ -0.48
CCDC149-204ENST00000504487 HIRIP3Q9BW71 556 aaPredicted RBP12.01□□□□□ -0.49
CCDC149-204ENST00000504487 SOGA1O94964 1423 aa12□□□□□ -0.49
CCDC149-204ENST00000504487 DEKP35659 375 aaKnown RBP11.99□□□□□ -0.49
CCDC149-204ENST00000504487 HNRNPUQ00839 825 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCDC149-204ENST00000504487 CLIP1P30622 1438 aa11.98□□□□□ -0.49
CCDC149-204ENST00000504487 CNGB1Q14028 1251 aaPredicted RBP11.97□□□□□ -0.49
CCDC149-204ENST00000504487 PRKCSHP14314 528 aaPredicted RBP11.96□□□□□ -0.5
CCDC149-204ENST00000504487 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
CCDC149-204ENST00000504487 EEA1Q15075 1411 aa11.91□□□□□ -0.5
CCDC149-204ENST00000504487 ATAD2BQ9ULI0 1458 aa11.89□□□□□ -0.51
CCDC149-204ENST00000504487 ANP32AP39687 249 aaKnown RBP11.89□□□□□ -0.51
CCDC149-204ENST00000504487 POLR3GLQ9BT43 218 aa11.89□□□□□ -0.51
CCDC149-204ENST00000504487 DHX57Q6P158 1386 aaKnown RBP11.88□□□□□ -0.51
CCDC149-204ENST00000504487 DNAJC5BQ9UF47 199 aa11.87□□□□□ -0.51
CCDC149-204ENST00000504487 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
CCDC149-204ENST00000504487 MSH5O43196 834 aa11.87□□□□□ -0.51
CCDC149-204ENST00000504487 SMARCA4P51532 1647 aa11.87□□□□□ -0.51
CCDC149-204ENST00000504487 RTN4Q9NQC3 1192 aaKnown RBP11.86□□□□□ -0.51
CCDC149-204ENST00000504487 EIF5BO60841 1220 aaKnown RBP11.85□□□□□ -0.51
CCDC149-204ENST00000504487 FANCIQ9NVI1 1328 aa11.84□□□□□ -0.51
CCDC149-204ENST00000504487 SIN3AQ96ST3 1273 aa11.84□□□□□ -0.51
CCDC149-204ENST00000504487 NOP58Q9Y2X3 529 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms